FFCP PHASE1:Mm9::chr10:127026662..127026670,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=5|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:127026662..127026670,-|id=chr10:127026662..127026670,-|ontology_enrichment_celltype=CL:0000055!9.98e-12!50;CL:0002321!1.14e-09!70;CL:0000220!1.14e-09!70;CL:0000393!1.45e-08!39;CL:0000211!1.45e-08!39;CL:0000117!4.23e-08!23;CL:0000337!4.23e-08!23;CL:0002319!6.51e-08!43;CL:0000221!2.03e-07!44;CL:0000133!2.03e-07!44|ontology_enrichment_celltype_v019_2=CL:0000680,9.20e-16,6;CL:0000187,9.20e-16,6;CL:0000056,9.20e-16,6;CL:0002321,1.04e-13,70;CL:0000222,2.03e-13,7;CL:0002453,3.97e-12,8;CL:0000723,8.19e-11,91;CL:0000048,8.19e-11,91;CL:0000355,2.72e-10,9;CL:0000034,7.83e-10,97;CL:0002092,9.67e-10,3;CL:0002540,9.67e-10,3;CL:0000333,1.46e-09,10;CL:0000095,1.46e-09,10;CL:0000243,1.46e-09,10;CL:0000123,1.46e-09,10;CL:0000125,1.46e-09,10;CL:0000030,1.46e-09,10;CL:0000339,1.46e-09,10;CL:0000192,1.05e-08,3;CL:0000359,1.05e-08,3;CL:0002539,1.05e-08,3;CL:0000514,1.05e-08,3;CL:0002494,1.12e-08,3;CL:0000737,1.12e-08,3;CL:0000746,1.12e-08,3;CL:0000513,1.12e-08,3;CL:0000393,1.39e-08,39;CL:0000211,1.39e-08,39;CL:0002319,1.04e-07,43;CL:0000128,1.58e-07,6;CL:0000126,1.58e-07,6;CL:0000127,1.58e-07,6;CL:0000221,1.79e-07,44;CL:0000133,1.79e-07,44;CL:0000219,2.81e-07,54;CL:0002194,3.22e-07,4;CL:0000766,3.22e-07,4;CL:0000234,3.22e-07,4;CL:0000576,3.22e-07,4;CL:0000235,3.22e-07,4;CL:0000864,3.22e-07,4;CL:0002009,3.22e-07,4;CL:0000040,3.22e-07,4;CL:0000559,3.22e-07,4;CL:0000878,9.88e-07,2;CL:0000129,9.88e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.49e-09!73;UBERON:0005743!5.49e-09!73;UBERON:0000073!9.89e-09!75;UBERON:0001016!9.89e-09!75;UBERON:0000025!1.06e-08!114;UBERON:0002020!7.92e-08!34;UBERON:0001049!1.11e-07!52;UBERON:0005068!1.11e-07!52;UBERON:0006241!1.11e-07!52;UBERON:0007135!1.11e-07!52;UBERON:0000955!3.53e-07!50;UBERON:0006238!3.53e-07!50;UBERON:0002616!4.79e-07!49;UBERON:0004111!5.81e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.39e-10,32;UBERON:0001134,2.72e-10,9;UBERON:0002036,2.72e-10,9;UBERON:0002385,2.72e-10,9;UBERON:0000486,2.72e-10,9;UBERON:0007503,2.72e-10,9;UBERON:0001015,2.72e-10,9;UBERON:0002329,2.72e-10,9;UBERON:0003082,2.72e-10,9;UBERON:0003059,2.72e-10,9;UBERON:0007282,2.72e-10,9;UBERON:0004290,2.72e-10,9;UBERON:0009618,2.72e-10,9;UBERON:0000383,3.39e-09,10;UBERON:0001135,1.05e-08,3;UBERON:0004237,1.05e-08,3;UBERON:0004695,1.05e-08,3;UBERON:0002111,1.05e-08,3;UBERON:0004178,1.05e-08,3;UBERON:0007524,2.67e-08,11;UBERON:0003077,2.67e-08,11;UBERON:0007285,2.67e-08,11|phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0.695036658406197,0.261199789138935,0.47997726838022,0.45881856213434,0,0,0.646413698057667,0.760093677825496,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.82478476195126,1.28482726513177,1.56478268869608,0.436050312760893,1.31811709640683,2.91644848611425,1.39986421625363,0,0,0,0,2.57259436035947,2.0057340795713,1.03134418455488,0.202316460859598,1.05798195854407,0.633831403506179,1.0165335962074,0.889294796111139,4.94944844504769,5.93319817540185,4.9733608046227,1.79760066311043,3.45796474789399,0,0.945041568321835,0.210324961351382,0.571301968807607,1.10434270475807,0.244981598429908,0.287536413054709,0.919218786610021,1.10115880999389,0.383062014255563,0.614426133024974,0.527545150920775,0.548925861614458,1.04182674111352,1.67509799400829,0.56276261003168,1.06958773443767,2.35702868378934,0.996601765593721,0.745597783301202,0.075726193333184,0.0755715601067855,0,1.72084775396277,0.679971333707751,5.39703191637817,1.29955283489534,0.896053774194671,0.280888840263504,0.511290967734173,0.779358013808606,0.70667914902068,0,1.28326477414318,0,0,0.649473123033642,0,0.505524445014783,0,0,0.445326417194474,0.173485326766136,0,0,0.60289056221049,0,0.376999773989026,0,0,0,0.485300549842228,0,0,0,0.585561594023094,0.41889341362691,0.255457055208591,0.11981512450592,0,0,0,0,0.628271760564322,0,0.767146371990992,0.62336413367868,0.162241263067758,0.611036183101898,0.248813941220186,0,0,0.260240885925407,0.229902104433473,0,0.30140963567143,0,0.384341160854549,0.0937017245597288,0,0.215567992932842,0.756424320671277,0.175951124163949,0,1.11218899690239,0.696504333044333,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.462801338662135,0,0,0,0.329119699826961,0,0,0,0,0.134206418760372,0.420579897128254,0.102904612379284,0.660837565967596,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.648414149624083,0.199141273254367,0,0.114248512609729,0,0.407302655690628,0,0.0701358198903186,0,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0.196558995113203,0.449724224769707,0,0.241177159752417,0.50925170356284,0,0,0.274561413188081,25.8782771749238,0.744281895337007,1.24815069245824,0.757736633841335,0.358794827043824,0.482443521363367,0,0,0,0,0,0.335012514883631,0.238043640886014,0.390267295715598,0,0.221464689648775,0.159454768657487,0.655453258862952,0.345369963731791,0.723245292907558,6.03165135757089,0.54390568381871,0,0,0.321101179975584,0.117211686592203,0.163934945376675,0.504941854408746,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0.809621403349789,0,0,0.321321316421807,0.283880170416537,0.534196811001766,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0.891844088010353,0.329098041204242,0.913394847343798,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.258319646955462,0.675824501963113,0.821500670520278,0.2604087696879,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0,1.12950368523413,0.920650473014354,1.14579102687879,0,0.685082519770642,0,1.35004500046361,0.900642406448441,0.906284817968409,0,0,0,0,0,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0.37456602987953,0.384150914429216,0.229741875822453,0.476293691283074,0,0.192909220463705,0,0.294397840268795,0,0.70990322463735,0.476872379894642,0.290692833264657,0.376437521661322,0.169229215783353,0.365855945745545,0.263069711437843,0.814824683075171,0,0.355905054372522,0.197008964751127,0,0.464810523557898,0,0.749431733813838,0,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p@chr10:127026662..127026670,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=5 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:127026662..127026670,- | |||
|id=chr10:127026662..127026670,- | |||
|ontology_enrichment_celltype=CL:0000055!9.98e-12!50;CL:0002321!1.14e-09!70;CL:0000220!1.14e-09!70;CL:0000393!1.45e-08!39;CL:0000211!1.45e-08!39;CL:0000117!4.23e-08!23;CL:0000337!4.23e-08!23;CL:0002319!6.51e-08!43;CL:0000221!2.03e-07!44;CL:0000133!2.03e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,9.20e-16,6;CL:0000187,9.20e-16,6;CL:0000056,9.20e-16,6;CL:0002321,1.04e-13,70;CL:0000222,2.03e-13,7;CL:0002453,3.97e-12,8;CL:0000723,8.19e-11,91;CL:0000048,8.19e-11,91;CL:0000355,2.72e-10,9;CL:0000034,7.83e-10,97;CL:0002092,9.67e-10,3;CL:0002540,9.67e-10,3;CL:0000333,1.46e-09,10;CL:0000095,1.46e-09,10;CL:0000243,1.46e-09,10;CL:0000123,1.46e-09,10;CL:0000125,1.46e-09,10;CL:0000030,1.46e-09,10;CL:0000339,1.46e-09,10;CL:0000192,1.05e-08,3;CL:0000359,1.05e-08,3;CL:0002539,1.05e-08,3;CL:0000514,1.05e-08,3;CL:0002494,1.12e-08,3;CL:0000737,1.12e-08,3;CL:0000746,1.12e-08,3;CL:0000513,1.12e-08,3;CL:0000393,1.39e-08,39;CL:0000211,1.39e-08,39;CL:0002319,1.04e-07,43;CL:0000128,1.58e-07,6;CL:0000126,1.58e-07,6;CL:0000127,1.58e-07,6;CL:0000221,1.79e-07,44;CL:0000133,1.79e-07,44;CL:0000219,2.81e-07,54;CL:0002194,3.22e-07,4;CL:0000766,3.22e-07,4;CL:0000234,3.22e-07,4;CL:0000576,3.22e-07,4;CL:0000235,3.22e-07,4;CL:0000864,3.22e-07,4;CL:0002009,3.22e-07,4;CL:0000040,3.22e-07,4;CL:0000559,3.22e-07,4;CL:0000878,9.88e-07,2;CL:0000129,9.88e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.49e-09!73;UBERON:0005743!5.49e-09!73;UBERON:0000073!9.89e-09!75;UBERON:0001016!9.89e-09!75;UBERON:0000025!1.06e-08!114;UBERON:0002020!7.92e-08!34;UBERON:0001049!1.11e-07!52;UBERON:0005068!1.11e-07!52;UBERON:0006241!1.11e-07!52;UBERON:0007135!1.11e-07!52;UBERON:0000955!3.53e-07!50;UBERON:0006238!3.53e-07!50;UBERON:0002616!4.79e-07!49;UBERON:0004111!5.81e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.39e-10,32;UBERON:0001134,2.72e-10,9;UBERON:0002036,2.72e-10,9;UBERON:0002385,2.72e-10,9;UBERON:0000486,2.72e-10,9;UBERON:0007503,2.72e-10,9;UBERON:0001015,2.72e-10,9;UBERON:0002329,2.72e-10,9;UBERON:0003082,2.72e-10,9;UBERON:0003059,2.72e-10,9;UBERON:0007282,2.72e-10,9;UBERON:0004290,2.72e-10,9;UBERON:0009618,2.72e-10,9;UBERON:0000383,3.39e-09,10;UBERON:0001135,1.05e-08,3;UBERON:0004237,1.05e-08,3;UBERON:0004695,1.05e-08,3;UBERON:0002111,1.05e-08,3;UBERON:0004178,1.05e-08,3;UBERON:0007524,2.67e-08,11;UBERON:0003077,2.67e-08,11;UBERON:0007285,2.67e-08,11 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0.695036658406197,0.261199789138935,0.47997726838022,0.45881856213434,0,0,0.646413698057667,0.760093677825496,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.82478476195126,1.28482726513177,1.56478268869608,0.436050312760893,1.31811709640683,2.91644848611425,1.39986421625363,0,0,0,0,2.57259436035947,2.0057340795713,1.03134418455488,0.202316460859598,1.05798195854407,0.633831403506179,1.0165335962074,0.889294796111139,4.94944844504769,5.93319817540185,4.9733608046227,1.79760066311043,3.45796474789399,0,0.945041568321835,0.210324961351382,0.571301968807607,1.10434270475807,0.244981598429908,0.287536413054709,0.919218786610021,1.10115880999389,0.383062014255563,0.614426133024974,0.527545150920775,0.548925861614458,1.04182674111352,1.67509799400829,0.56276261003168,1.06958773443767,2.35702868378934,0.996601765593721,0.745597783301202,0.075726193333184,0.0755715601067855,0,1.72084775396277,0.679971333707751,5.39703191637817,1.29955283489534,0.896053774194671,0.280888840263504,0.511290967734173,0.779358013808606,0.70667914902068,0,1.28326477414318,0,0,0.649473123033642,0,0.505524445014783,0,0,0.445326417194474,0.173485326766136,0,0,0.60289056221049,0,0.376999773989026,0,0,0,0.485300549842228,0,0,0,0.585561594023094,0.41889341362691,0.255457055208591,0.11981512450592,0,0,0,0,0.628271760564322,0,0.767146371990992,0.62336413367868,0.162241263067758,0.611036183101898,0.248813941220186,0,0,0.260240885925407,0.229902104433473,0,0.30140963567143,0,0.384341160854549,0.0937017245597288,0,0.215567992932842,0.756424320671277,0.175951124163949,0,1.11218899690239,0.696504333044333,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.462801338662135,0,0,0,0.329119699826961,0,0,0,0,0.134206418760372,0.420579897128254,0.102904612379284,0.660837565967596,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.648414149624083,0.199141273254367,0,0.114248512609729,0,0.407302655690628,0,0.0701358198903186,0,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0.196558995113203,0.449724224769707,0,0.241177159752417,0.50925170356284,0,0,0.274561413188081,25.8782771749238,0.744281895337007,1.24815069245824,0.757736633841335,0.358794827043824,0.482443521363367,0,0,0,0,0,0.335012514883631,0.238043640886014,0.390267295715598,0,0.221464689648775,0.159454768657487,0.655453258862952,0.345369963731791,0.723245292907558,6.03165135757089,0.54390568381871,0,0,0.321101179975584,0.117211686592203,0.163934945376675,0.504941854408746,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0.809621403349789,0,0,0.321321316421807,0.283880170416537,0.534196811001766,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0.891844088010353,0.329098041204242,0.913394847343798,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.258319646955462,0.675824501963113,0.821500670520278,0.2604087696879,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0,1.12950368523413,0.920650473014354,1.14579102687879,0,0.685082519770642,0,1.35004500046361,0.900642406448441,0.906284817968409,0,0,0,0,0,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0.37456602987953,0.384150914429216,0.229741875822453,0.476293691283074,0,0.192909220463705,0,0.294397840268795,0,0.70990322463735,0.476872379894642,0.290692833264657,0.376437521661322,0.169229215783353,0.365855945745545,0.263069711437843,0.814824683075171,0,0.355905054372522,0.197008964751127,0,0.464810523557898,0,0.749431733813838,0,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr10:127026662..127026670,- | |||
}} |
Revision as of 16:04, 12 September 2013
Short description: | p@chr10:127026662..127026670, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:127026662..127026670, - |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.39e-10 | 32 |
skeletal muscle tissue | 2.72e-10 | 9 |
striated muscle tissue | 2.72e-10 | 9 |
muscle tissue | 2.72e-10 | 9 |
multilaminar epithelium | 2.72e-10 | 9 |
epithelial vesicle | 2.72e-10 | 9 |
musculature | 2.72e-10 | 9 |
somite | 2.72e-10 | 9 |
myotome | 2.72e-10 | 9 |
presomitic mesoderm | 2.72e-10 | 9 |
presumptive segmental plate | 2.72e-10 | 9 |
dermomyotome | 2.72e-10 | 9 |
trunk paraxial mesoderm | 2.72e-10 | 9 |
musculature of body | 3.39e-09 | 10 |
smooth muscle tissue | 1.05e-08 | 3 |
blood vessel smooth muscle | 1.05e-08 | 3 |
arterial system smooth muscle | 1.05e-08 | 3 |
artery smooth muscle tissue | 1.05e-08 | 3 |
aorta smooth muscle tissue | 1.05e-08 | 3 |
dense mesenchyme tissue | 2.67e-08 | 11 |
paraxial mesoderm | 2.67e-08 | 11 |
presumptive paraxial mesoderm | 2.67e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.