FFCP PHASE1:Mm9::chr10:127613679..127613701,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56516|HGNC=|UniProt=Q8VC70|association_with_transcript=-55bp_to_ENSMUST00000092033,NM_019711,uc007hlm.1_5end|description=CAGE_peak_4_at_Rbms2_5end|id=chr10:127613679..127613701,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!3.71e-12!193;UBERON:0004120!3.71e-12!193;UBERON:0006603!3.71e-12!193;UBERON:0003133!5.74e-07!24;UBERON:0001048!6.89e-07!147;UBERON:0005156!7.51e-07!26;UBERON:0000990!7.51e-07!26|ontology_enrichment_uberon_v019_2=UBERON:0003133,5.74e-07,24;UBERON:0005156,7.50e-07,26;UBERON:0000990,7.50e-07,26;UBERON:0001048,8.26e-07,134|phase1_expression=7.20669811971573,1.04692622291808,0.454999239389536,1.51232105653415,3.00537437967808,3.02182689441402,2.33612640595526,1.80772652818207,2.53419699873,0.70219357896598,2.05461561870606,2.15384829287408,2.05440875917447,4.54586092578786,5.3297561890506,3.84703008040669,3.49780939064073,5.52058789376916,4.11343300817216,2.54633791078818,7.05859308253879,3.47518329203099,2.61199789138935,4.47978783821539,2.52350209173887,2.29692785646008,2.15380998079537,4.09395342103189,2.28028103347649,2.77233142735924,2.21730510655305,2.54012269383853,3.07532393792285,0,2.02196133825892,2.82598897109437,2.04169356262369,0.418531630736908,0,1.57057123192139,0,0,0.485510353031154,4.90997590104751,5.06884656097573,7.70896359079063,8.60630478782843,5.23260375313072,9.44650585758229,7.19390626574849,6.15940255151595,7.18762821824858,3.52343472721246,2.17608642603403,4.36921938885203,2.31533492432352,3.15186783932632,3.09403255366465,2.83243045203437,1.5869729378161,4.43681982454325,6.09920157724438,10.6715375533337,13.498495759221,5.93319817540185,6.3943210345149,7.19040265244171,5.76327457982332,3.7328260431052,2.43010688997043,2.94454945891935,2.85650984403804,2.20868540951614,1.34739879136449,3.35459148563827,1.83843757322004,1.10115880999389,3.57524546638526,3.5329502648936,2.63772575460388,2.56165402086747,2.08365348222704,1.95428099300967,2.8138130501584,4.43114918552749,0.883885756421003,2.27794689278565,3.54158947068071,2.27178579999552,3.32514864469856,7.53647670624362,0.860423876981386,2.03991400112325,5.39703191637817,1.94932925234301,4.92829575807069,6.88177658645584,12.9527045159324,7.53379413348319,6.71345191569646,4.64783285263046,1.28326477414318,2.54805239706646,0,2.16491041011214,1.01343946190039,5.05524445014783,5.1382745873577,12.4290184150642,9.64873903921361,3.99016251562112,2.43572382649713,3.68984795609694,4.82312449768392,6.11461277105665,7.6656620711102,17.7980376768749,16.6289260457898,6.19227386364912,5.82360659810673,5.30019644304944,8.727754556434,3.72783522436244,4.68449275218475,2.51336048176146,5.10914110417183,2.39630249011841,2.39961092397363,2.79554499560742,2.24685959107234,2.74500361691176,1.63350657746724,2.78118912307642,1.27857728665165,2.49345653471472,2.59586020908412,7.12875546952214,6.46916247172484,10.108910337347,12.8369532090749,5.07469727554544,2.75882525320168,4.32149111532838,4.06903008156431,4.150226448231,1.5373646434182,3.27956035959051,5.95017752699736,6.68260778091811,7.18603104637713,6.51019159406611,5.91828477554452,8.61946472599353,8.70630416305416,5.55611768301447,6.17006227137329,0.702213187313235,1.80143534980301,2.55747149456033,8.49215667395558,7.03578179943289,8.4629168886677,9.2330446878232,11.0187969778546,9.10175966035532,9.99895962426754,10.7309360559848,10.9759421825139,10.6963902443762,14.1184019108022,15.727349051896,13.1579988682799,15.3685080703735,12.3469905259542,1.47202963994889,2.05809224758569,6.27795687669216,6.08236303326152,4.90562976231038,6.50262681209228,6.70110798874885,8.0673409849337,6.44896327150124,3.80451252225118,1.89811624617805,5.10566759644434,7.54005626400809,6.76452004939913,6.04388670069272,8.08937467788799,4.32276099749388,3.18626037206988,7.39704813717019,5.9409226557059,5.63538678365402,5.90588850751411,6.98228953803453,8.27602674705759,9.10606134589305,6.4948465111025,7.37894020854462,6.16985819609003,3.55743152504579,6.34011401721157,3.53806191203765,5.8464149220062,4.66578279193557,6.51178331331525,2.29163266603278,7.48009957372108,3.72911021582581,4.11842119782122,12.9391385874619,6.32639611036456,5.30464044294753,6.81962970457202,7.53469136792031,5.78932225636041,12.1937105509959,5.11626811780309,6.02970412835496,3.90413697282933,6.33663670378956,11.7254380209271,10.9500074807566,11.9031525193257,6.77831119656621,11.0732344824387,11.3212885746816,7.86543910635542,11.2245238212832,9.11289069063523,13.5712155545345,4.89515115436839,6.88469982226651,8.27810238914197,3.53211297973142,4.33683240391152,7.70494243270374,14.3908428506493,2.52406575533005,2.34263246577983,2.80050417052639,4.06246956519338,4.23317480756549,4.24614796183249,2.83367491172426,2.92255857911312,3.16230222357219,6.42642632843614,6.52924391958036,6.94455854302295,7.00413925220377,10.0631775013247,9.2921596837974,6.06951590387454,5.13950046840077,4.14931175462976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| ||
|EntrezGene=56516 | |||
|HGNC= | |||
|UniProt=Q8VC70 | |||
|association_with_transcript=-55bp_to_ENSMUST00000092033,NM_019711,uc007hlm.1_5end | |||
|description=CAGE_peak_4_at_Rbms2_5end | |||
|id=chr10:127613679..127613701,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.71e-12!193;UBERON:0004120!3.71e-12!193;UBERON:0006603!3.71e-12!193;UBERON:0003133!5.74e-07!24;UBERON:0001048!6.89e-07!147;UBERON:0005156!7.51e-07!26;UBERON:0000990!7.51e-07!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,5.74e-07,24;UBERON:0005156,7.50e-07,26;UBERON:0000990,7.50e-07,26;UBERON:0001048,8.26e-07,134 | |||
|phase1_expression=7.20669811971573,1.04692622291808,0.454999239389536,1.51232105653415,3.00537437967808,3.02182689441402,2.33612640595526,1.80772652818207,2.53419699873,0.70219357896598,2.05461561870606,2.15384829287408,2.05440875917447,4.54586092578786,5.3297561890506,3.84703008040669,3.49780939064073,5.52058789376916,4.11343300817216,2.54633791078818,7.05859308253879,3.47518329203099,2.61199789138935,4.47978783821539,2.52350209173887,2.29692785646008,2.15380998079537,4.09395342103189,2.28028103347649,2.77233142735924,2.21730510655305,2.54012269383853,3.07532393792285,0,2.02196133825892,2.82598897109437,2.04169356262369,0.418531630736908,0,1.57057123192139,0,0,0.485510353031154,4.90997590104751,5.06884656097573,7.70896359079063,8.60630478782843,5.23260375313072,9.44650585758229,7.19390626574849,6.15940255151595,7.18762821824858,3.52343472721246,2.17608642603403,4.36921938885203,2.31533492432352,3.15186783932632,3.09403255366465,2.83243045203437,1.5869729378161,4.43681982454325,6.09920157724438,10.6715375533337,13.498495759221,5.93319817540185,6.3943210345149,7.19040265244171,5.76327457982332,3.7328260431052,2.43010688997043,2.94454945891935,2.85650984403804,2.20868540951614,1.34739879136449,3.35459148563827,1.83843757322004,1.10115880999389,3.57524546638526,3.5329502648936,2.63772575460388,2.56165402086747,2.08365348222704,1.95428099300967,2.8138130501584,4.43114918552749,0.883885756421003,2.27794689278565,3.54158947068071,2.27178579999552,3.32514864469856,7.53647670624362,0.860423876981386,2.03991400112325,5.39703191637817,1.94932925234301,4.92829575807069,6.88177658645584,12.9527045159324,7.53379413348319,6.71345191569646,4.64783285263046,1.28326477414318,2.54805239706646,0,2.16491041011214,1.01343946190039,5.05524445014783,5.1382745873577,12.4290184150642,9.64873903921361,3.99016251562112,2.43572382649713,3.68984795609694,4.82312449768392,6.11461277105665,7.6656620711102,17.7980376768749,16.6289260457898,6.19227386364912,5.82360659810673,5.30019644304944,8.727754556434,3.72783522436244,4.68449275218475,2.51336048176146,5.10914110417183,2.39630249011841,2.39961092397363,2.79554499560742,2.24685959107234,2.74500361691176,1.63350657746724,2.78118912307642,1.27857728665165,2.49345653471472,2.59586020908412,7.12875546952214,6.46916247172484,10.108910337347,12.8369532090749,5.07469727554544,2.75882525320168,4.32149111532838,4.06903008156431,4.150226448231,1.5373646434182,3.27956035959051,5.95017752699736,6.68260778091811,7.18603104637713,6.51019159406611,5.91828477554452,8.61946472599353,8.70630416305416,5.55611768301447,6.17006227137329,0.702213187313235,1.80143534980301,2.55747149456033,8.49215667395558,7.03578179943289,8.4629168886677,9.2330446878232,11.0187969778546,9.10175966035532,9.99895962426754,10.7309360559848,10.9759421825139,10.6963902443762,14.1184019108022,15.727349051896,13.1579988682799,15.3685080703735,12.3469905259542,1.47202963994889,2.05809224758569,6.27795687669216,6.08236303326152,4.90562976231038,6.50262681209228,6.70110798874885,8.0673409849337,6.44896327150124,3.80451252225118,1.89811624617805,5.10566759644434,7.54005626400809,6.76452004939913,6.04388670069272,8.08937467788799,4.32276099749388,3.18626037206988,7.39704813717019,5.9409226557059,5.63538678365402,5.90588850751411,6.98228953803453,8.27602674705759,9.10606134589305,6.4948465111025,7.37894020854462,6.16985819609003,3.55743152504579,6.34011401721157,3.53806191203765,5.8464149220062,4.66578279193557,6.51178331331525,2.29163266603278,7.48009957372108,3.72911021582581,4.11842119782122,12.9391385874619,6.32639611036456,5.30464044294753,6.81962970457202,7.53469136792031,5.78932225636041,12.1937105509959,5.11626811780309,6.02970412835496,3.90413697282933,6.33663670378956,11.7254380209271,10.9500074807566,11.9031525193257,6.77831119656621,11.0732344824387,11.3212885746816,7.86543910635542,11.2245238212832,9.11289069063523,13.5712155545345,4.89515115436839,6.88469982226651,8.27810238914197,3.53211297973142,4.33683240391152,7.70494243270374,14.3908428506493,2.52406575533005,2.34263246577983,2.80050417052639,4.06246956519338,4.23317480756549,4.24614796183249,2.83367491172426,2.92255857911312,3.16230222357219,6.42642632843614,6.52924391958036,6.94455854302295,7.00413925220377,10.0631775013247,9.2921596837974,6.06951590387454,5.13950046840077,4.14931175462976,8.26845300066164,11.0676653259814,3.6179961043551,1.45413491791002,3.20847640546249,3.16036757935816,5.27093042874994,4.12542172992747,6.12791290356818,4.50152735078276,7.37344497561701,5.14408884075822,8.86701168211368,6.24290861607247,5.59466670047211,3.34911444026059,7.50949465803873,9.53244318887191,3.30792597082443,14.0153315000258,5.9741837877485,10.5547618624273,9.43041517624778,5.74493149107714,5.24665505933731,8.15871328846243,5.63873906632914,5.57244543500701,4.25947412950337,2.44878994106098,6.83471138605126,3.20289442489132,2.71965487990169,2.93898049879682,2.76399947608848,13.3653886522116,8.22473583310952,6.50622294805916,6.04829908602087,6.06356058441959,4.5856138386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| |||
|short_description=p4@Rbms2 | |||
}} | |||
Revision as of 16:07, 12 September 2013
| Short description: | p4@Rbms2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Rbms2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -55bp_to_ENSMUST00000092033, NM_019711, uc007hlm.1_5end |
| EntrezGene: | Rbms2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| reproductive organ | 5.74e-07 | 24 |
| reproductive structure | 7.50e-07 | 26 |
| reproductive system | 7.50e-07 | 26 |
| primordium | 8.26e-07 | 134 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
