FFCP PHASE1:Mm9::chr10:19318194..19318199,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=29|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:19318194..19318199,+|id=chr10:19318194..19318199,+|ontology_enrichment_celltype=CL:0000791!8.14e-19!9;CL:0000789!8.14e-19!9;CL:0002420!8.14e-19!9;CL:0002419!8.14e-19!9;CL:0000790!8.14e-19!9;CL:0000624!3.46e-16!8;CL:0000084!3.88e-15!11;CL:0000827!3.88e-15!11;CL:0000838!9.30e-14!12;CL:0000542!1.37e-12!13;CL:0000051!1.37e-12!13;CL:0000893!2.95e-11!6;CL:0002489!2.95e-11!6;CL:0000898!2.95e-11!6;CL:0000809!2.95e-11!6;CL:0000810!2.95e-11!6;CL:0000895!2.95e-11!6;CL:0000808!2.95e-11!6;CL:0000894!2.95e-11!6;CL:0000806!2.95e-11!6;CL:0000807!2.95e-11!6;CL:0000805!2.95e-11!6;CL:0002425!2.95e-11!6;CL:0002436!2.95e-11!6;CL:0002427!2.95e-11!6;CL:0002428!2.95e-11!6;CL:0002429!2.95e-11!6;CL:0002433!2.95e-11!6;CL:0002431!2.95e-11!6;CL:0002432!2.95e-11!6;CL:0000738!2.69e-09!17;CL:0002087!2.69e-09!17;CL:0000988!5.00e-08!32;CL:0002032!5.00e-08!32;CL:0000037!5.00e-08!32;CL:0000566!5.00e-08!32;CL:0000837!5.00e-08!32|ontology_enrichment_celltype_v019_2=CL:0000791,4.25e-18,9;CL:0000789,4.25e-18,9;CL:0002420,4.25e-18,9;CL:0002419,4.25e-18,9;CL:0000790,4.25e-18,9;CL:0000084,6.87e-15,11;CL:0000827,6.87e-15,11;CL:0000838,1.10e-13,12;CL:0000542,1.16e-12,13;CL:0000051,1.16e-12,13;CL:0000624,6.94e-12,8;CL:0000815,1.83e-11,1;CL:0000792,1.83e-11,1;CL:0000625,2.90e-11,1;CL:0000738,9.06e-10,17;CL:0002087,9.06e-10,17;CL:0000893,1.51e-07,6;CL:0002489,1.51e-07,6;CL:0000898,1.51e-07,6;CL:0000809,1.51e-07,6;CL:0000810,1.51e-07,6;CL:0000895,1.51e-07,6;CL:0000808,1.51e-07,6;CL:0000894,1.51e-07,6;CL:0000806,1.51e-07,6;CL:0000807,1.51e-07,6;CL:0000805,1.51e-07,6;CL:0002425,1.51e-07,6;CL:0002436,1.51e-07,6;CL:0002427,1.51e-07,6;CL:0002428,1.51e-07,6;CL:0002429,1.51e-07,6;CL:0002433,1.51e-07,6;CL:0002431,1.51e-07,6;CL:0002432,1.51e-07,6;CL:0002031,9.72e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.31e-34!23;UBERON:0000974!2.31e-34!23;UBERON:0004807!2.31e-34!23;UBERON:0005058!2.31e-34!23;UBERON:0003351!2.31e-34!23;UBERON:0009113!2.31e-34!23;UBERON:0003295!2.31e-34!23;UBERON:0009722!2.31e-34!23;UBERON:0005562!2.31e-34!23;UBERON:0007690!2.31e-34!23;UBERON:0006562!9.34e-33!24;UBERON:0003408!9.34e-33!24;UBERON:0001557!9.34e-33!24;UBERON:0001042!9.34e-33!24;UBERON:0008814!9.34e-33!24;UBERON:0009145!9.34e-33!24;UBERON:0000072!1.20e-28!27;UBERON:0004177!2.21e-26!29;UBERON:0000065!9.91e-22!41;UBERON:0000063!3.88e-21!35;UBERON:0001004!4.20e-21!42;UBERON:0002390!1.69e-19!45;UBERON:0003061!1.69e-19!45;UBERON:0002193!5.43e-18!48;UBERON:0003929!4.53e-15!55;UBERON:0005057!7.12e-15!51;UBERON:0005911!8.82e-14!69;UBERON:0000490!2.69e-13!66;UBERON:0002405!3.21e-12!70;UBERON:0002368!5.46e-12!60;UBERON:0002530!9.80e-11!65;UBERON:0000949!2.82e-09!72;UBERON:0003081!9.10e-09!88;UBERON:0001041!4.02e-08!92;UBERON:0000077!1.82e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.01e-15,23;UBERON:0000974,4.01e-15,23;UBERON:0004807,4.01e-15,23;UBERON:0005058,4.01e-15,23;UBERON:0003351,4.01e-15,23;UBERON:0009113,4.01e-15,23;UBERON:0003295,4.01e-15,23;UBERON:0009722,4.01e-15,23;UBERON:0005562,4.01e-15,23;UBERON:0007690,4.01e-15,23;UBERON:0006562,1.70e-14,24;UBERON:0003408,1.70e-14,24;UBERON:0001557,1.70e-14,24;UBERON:0001042,1.70e-14,24;UBERON:0008814,1.70e-14,24;UBERON:0009145,1.70e-14,24;UBERON:0000072,6.91e-13,27;UBERON:0004177,5.35e-12,29;UBERON:0005057,5.35e-12,29;UBERON:0000077,6.17e-10,35;UBERON:0007811,1.17e-09,36;UBERON:0000065,1.80e-08,41;UBERON:0001004,2.88e-08,42;UBERON:0000153,4.51e-08,43;UBERON:0002390,1.04e-07,45;UBERON:0003061,1.04e-07,45;UBERON:0002193,3.21e-07,48;UBERON:0002405,3.21e-07,48|phase1_expression=0,0,0,0,0,0.16787927191189,0,14.7200588723397,0.985521055061667,0.70219357896598,0,0.0797721589953364,2.73921167889929,1.48614684112296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0.102710957164827,0.77952493786677,0.716106782669926,1.19208812868759,0.240390899039938,0.738447635872886,1.9183625490148,0.533447646584999,0.806609481094724,0.779663045918019,1.05833025804362,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:19318194..19318199,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:19318194..19318199,+ | |||
|id=chr10:19318194..19318199,+ | |||
|ontology_enrichment_celltype=CL:0000791!8.14e-19!9;CL:0000789!8.14e-19!9;CL:0002420!8.14e-19!9;CL:0002419!8.14e-19!9;CL:0000790!8.14e-19!9;CL:0000624!3.46e-16!8;CL:0000084!3.88e-15!11;CL:0000827!3.88e-15!11;CL:0000838!9.30e-14!12;CL:0000542!1.37e-12!13;CL:0000051!1.37e-12!13;CL:0000893!2.95e-11!6;CL:0002489!2.95e-11!6;CL:0000898!2.95e-11!6;CL:0000809!2.95e-11!6;CL:0000810!2.95e-11!6;CL:0000895!2.95e-11!6;CL:0000808!2.95e-11!6;CL:0000894!2.95e-11!6;CL:0000806!2.95e-11!6;CL:0000807!2.95e-11!6;CL:0000805!2.95e-11!6;CL:0002425!2.95e-11!6;CL:0002436!2.95e-11!6;CL:0002427!2.95e-11!6;CL:0002428!2.95e-11!6;CL:0002429!2.95e-11!6;CL:0002433!2.95e-11!6;CL:0002431!2.95e-11!6;CL:0002432!2.95e-11!6;CL:0000738!2.69e-09!17;CL:0002087!2.69e-09!17;CL:0000988!5.00e-08!32;CL:0002032!5.00e-08!32;CL:0000037!5.00e-08!32;CL:0000566!5.00e-08!32;CL:0000837!5.00e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.25e-18,9;CL:0000789,4.25e-18,9;CL:0002420,4.25e-18,9;CL:0002419,4.25e-18,9;CL:0000790,4.25e-18,9;CL:0000084,6.87e-15,11;CL:0000827,6.87e-15,11;CL:0000838,1.10e-13,12;CL:0000542,1.16e-12,13;CL:0000051,1.16e-12,13;CL:0000624,6.94e-12,8;CL:0000815,1.83e-11,1;CL:0000792,1.83e-11,1;CL:0000625,2.90e-11,1;CL:0000738,9.06e-10,17;CL:0002087,9.06e-10,17;CL:0000893,1.51e-07,6;CL:0002489,1.51e-07,6;CL:0000898,1.51e-07,6;CL:0000809,1.51e-07,6;CL:0000810,1.51e-07,6;CL:0000895,1.51e-07,6;CL:0000808,1.51e-07,6;CL:0000894,1.51e-07,6;CL:0000806,1.51e-07,6;CL:0000807,1.51e-07,6;CL:0000805,1.51e-07,6;CL:0002425,1.51e-07,6;CL:0002436,1.51e-07,6;CL:0002427,1.51e-07,6;CL:0002428,1.51e-07,6;CL:0002429,1.51e-07,6;CL:0002433,1.51e-07,6;CL:0002431,1.51e-07,6;CL:0002432,1.51e-07,6;CL:0002031,9.72e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.31e-34!23;UBERON:0000974!2.31e-34!23;UBERON:0004807!2.31e-34!23;UBERON:0005058!2.31e-34!23;UBERON:0003351!2.31e-34!23;UBERON:0009113!2.31e-34!23;UBERON:0003295!2.31e-34!23;UBERON:0009722!2.31e-34!23;UBERON:0005562!2.31e-34!23;UBERON:0007690!2.31e-34!23;UBERON:0006562!9.34e-33!24;UBERON:0003408!9.34e-33!24;UBERON:0001557!9.34e-33!24;UBERON:0001042!9.34e-33!24;UBERON:0008814!9.34e-33!24;UBERON:0009145!9.34e-33!24;UBERON:0000072!1.20e-28!27;UBERON:0004177!2.21e-26!29;UBERON:0000065!9.91e-22!41;UBERON:0000063!3.88e-21!35;UBERON:0001004!4.20e-21!42;UBERON:0002390!1.69e-19!45;UBERON:0003061!1.69e-19!45;UBERON:0002193!5.43e-18!48;UBERON:0003929!4.53e-15!55;UBERON:0005057!7.12e-15!51;UBERON:0005911!8.82e-14!69;UBERON:0000490!2.69e-13!66;UBERON:0002405!3.21e-12!70;UBERON:0002368!5.46e-12!60;UBERON:0002530!9.80e-11!65;UBERON:0000949!2.82e-09!72;UBERON:0003081!9.10e-09!88;UBERON:0001041!4.02e-08!92;UBERON:0000077!1.82e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.01e-15,23;UBERON:0000974,4.01e-15,23;UBERON:0004807,4.01e-15,23;UBERON:0005058,4.01e-15,23;UBERON:0003351,4.01e-15,23;UBERON:0009113,4.01e-15,23;UBERON:0003295,4.01e-15,23;UBERON:0009722,4.01e-15,23;UBERON:0005562,4.01e-15,23;UBERON:0007690,4.01e-15,23;UBERON:0006562,1.70e-14,24;UBERON:0003408,1.70e-14,24;UBERON:0001557,1.70e-14,24;UBERON:0001042,1.70e-14,24;UBERON:0008814,1.70e-14,24;UBERON:0009145,1.70e-14,24;UBERON:0000072,6.91e-13,27;UBERON:0004177,5.35e-12,29;UBERON:0005057,5.35e-12,29;UBERON:0000077,6.17e-10,35;UBERON:0007811,1.17e-09,36;UBERON:0000065,1.80e-08,41;UBERON:0001004,2.88e-08,42;UBERON:0000153,4.51e-08,43;UBERON:0002390,1.04e-07,45;UBERON:0003061,1.04e-07,45;UBERON:0002193,3.21e-07,48;UBERON:0002405,3.21e-07,48 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,14.7200588723397,0.985521055061667,0.70219357896598,0,0.0797721589953364,2.73921167889929,1.48614684112296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0.102710957164827,0.77952493786677,0.716106782669926,1.19208812868759,0.240390899039938,0.738447635872886,1.9183625490148,0.533447646584999,0.806609481094724,0.779663045918019,1.05833025804362,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:19318194..19318199,+ | |||
}} |
Revision as of 16:21, 12 September 2013
Short description: | p@chr10:19318194..19318199, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:19318194..19318199, + |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.01e-15 | 23 |
neck | 4.01e-15 | 23 |
respiratory system epithelium | 4.01e-15 | 23 |
hemolymphoid system gland | 4.01e-15 | 23 |
pharyngeal epithelium | 4.01e-15 | 23 |
thymic region | 4.01e-15 | 23 |
pharyngeal gland | 4.01e-15 | 23 |
entire pharyngeal arch endoderm | 4.01e-15 | 23 |
thymus primordium | 4.01e-15 | 23 |
early pharyngeal endoderm | 4.01e-15 | 23 |
pharynx | 1.70e-14 | 24 |
gland of gut | 1.70e-14 | 24 |
upper respiratory tract | 1.70e-14 | 24 |
chordate pharynx | 1.70e-14 | 24 |
pharyngeal arch system | 1.70e-14 | 24 |
pharyngeal region of foregut | 1.70e-14 | 24 |
segment of respiratory tract | 6.91e-13 | 27 |
hemopoietic organ | 5.35e-12 | 29 |
immune organ | 5.35e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 6.17e-10 | 35 |
craniocervical region | 1.17e-09 | 36 |
respiratory tract | 1.80e-08 | 41 |
respiratory system | 2.88e-08 | 42 |
anterior region of body | 4.51e-08 | 43 |
hematopoietic system | 1.04e-07 | 45 |
blood island | 1.04e-07 | 45 |
hemolymphoid system | 3.21e-07 | 48 |
immune system | 3.21e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.