FFCP PHASE1:Mm9::chr10:30375579..30375616,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=211329|HGNC=|MCL_coexpression_id=1889|UniProt=Q6DFV7,A9Q6S9|association_with_transcript=56bp_to_ENSMUST00000092610,ENSMUST00000105514,NM_001111267,uc007eth.2,uc007eti.2,uc007etj.2,uc007etm.2,uc007etn.2_5end|description=CAGE_peak_3_at_Ncoa7_5end|id=chr10:30375579..30375616,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.13e-14!130;UBERON:0000925!3.13e-14!130;UBERON:0006595!3.13e-14!130;UBERON:0001007!6.41e-14!128;UBERON:0001555!6.41e-14!128;UBERON:0007026!6.41e-14!128;UBERON:0004921!2.49e-13!126;UBERON:0004185!2.49e-13!126;UBERON:0003104!1.54e-09!131;UBERON:0009142!1.54e-09!131;UBERON:0004177!3.18e-08!29;UBERON:0001004!6.96e-08!42;UBERON:0000065!1.04e-07!41;UBERON:0000077!1.40e-07!97;UBERON:0000926!3.04e-07!193;UBERON:0004120!3.04e-07!193;UBERON:0006603!3.04e-07!193;UBERON:0005409!3.24e-07!59;UBERON:0003408!3.53e-07!24;UBERON:0006562!3.70e-07!24;UBERON:0001557!3.70e-07!24;UBERON:0001042!3.70e-07!24;UBERON:0008814!3.70e-07!24;UBERON:0009145!3.70e-07!24;UBERON:0002193!4.11e-07!48;UBERON:0002370!5.02e-07!23;UBERON:0000974!5.02e-07!23;UBERON:0004807!5.02e-07!23;UBERON:0005058!5.02e-07!23;UBERON:0003351!5.02e-07!23;UBERON:0009113!5.02e-07!23;UBERON:0003295!5.02e-07!23;UBERON:0009722!5.02e-07!23;UBERON:0005562!5.02e-07!23;UBERON:0007690!5.02e-07!23;UBERON:0001041!5.90e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.96e-14,118;UBERON:0000925,1.96e-14,118;UBERON:0006595,1.96e-14,118;UBERON:0001007,4.07e-14,116;UBERON:0001555,4.07e-14,116;UBERON:0007026,4.07e-14,116;UBERON:0004921,1.68e-13,114;UBERON:0000077,2.56e-10,35;UBERON:0004177,1.99e-09,29;UBERON:0005057,1.99e-09,29;UBERON:0001004,1.17e-08,42;UBERON:0000065,1.80e-08,41;UBERON:0003408,2.60e-08,24;UBERON:0006562,2.75e-08,24;UBERON:0001557,2.75e-08,24;UBERON:0001042,2.75e-08,24;UBERON:0008814,2.75e-08,24;UBERON:0009145,2.75e-08,24;UBERON:0002193,3.26e-08,48;UBERON:0002405,3.26e-08,48;UBERON:0002370,3.75e-08,23;UBERON:0000974,3.75e-08,23;UBERON:0004807,3.75e-08,23;UBERON:0005058,3.75e-08,23;UBERON:0003351,3.75e-08,23;UBERON:0009113,3.75e-08,23;UBERON:0003295,3.75e-08,23;UBERON:0009722,3.75e-08,23;UBERON:0005562,3.75e-08,23;UBERON:0007690,3.75e-08,23;UBERON:0000072,1.03e-07,27;UBERON:0001041,2.17e-07,80;UBERON:0002390,3.60e-07,45;UBERON:0003061,3.60e-07,45;UBERON:0005409,4.55e-07,47|phase1_expression=15.6945870162698,3.48975407639361,4.54999239389536,0,0,13.766100296775,9.34450562382103,72.4381844507243,3.801295498095,9.83071010552373,10.9579499664323,13.5612670292072,12.3264525550468,14.4243663991346,1.66554880907831,1.61980213911861,0.699561878128147,2.68142840554502,2.33094537129756,2.54633791078818,6.20816018102809,0.198581902401771,0.783599367416806,3.67982572424835,4.5881856213434,5.16808767703518,6.46142994238612,6.89507944594845,0.950117097281869,2.26827116783938,6.20845429834853,0,0,0,5.77703239502549,2.82598897109437,7.9626048942324,0,0,0.523523743973798,0,0,0.971020706062307,0.125896817975577,0.101376931219515,0,0.782391344348039,0,0,0.388859798148567,1.53985063787899,0,0.335565212115473,5.80289713609076,5.37750078627942,3.34437266846731,0.85960031981627,1.03134418455488,0,0,0,0.677689064138264,1.77858959222228,0,0,0.7104801149461,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0,0,1.10115880999389,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0.294628585473668,0.142371680799103,0,0.681535739998656,0.982430281388212,18.8411917656091,0,0,0,0,0,3.37066608316204,0.511290967734173,0.259786004602869,0,15.0702459161048,0,0,0,2.59789249213457,1.01343946190039,1.01104889002957,5.36664234679582,22.7865337609511,4.89859058913922,0.693941307064543,4.56698217468212,2.07553947530453,4.22023393547343,3.88042733547826,6.1576629751541,1.23597483867187,3.7595832799177,0.884610551949874,2.10296904931632,0.662524555381181,0.484875253135222,74.5567044872489,0,0.209446706813455,3.0654846625031,5.63131085177825,1.79970819298022,6.09937089950711,0,0,0,0.173824320192276,0,0.20778804455956,0,2.03678727700633,2.36373244159177,2.0217820674694,0.841767423545896,0.780722657776222,0.229902104433473,0.540186389416048,0.452114453507145,0.272145996605311,0.384341160854549,0.374806898238915,0.258703370739016,0.215567992932842,0.567318240503458,0.703804496655795,0.219195732427575,0,1.0447564995665,1.02891068203972,0.796137067273973,2.1066395619397,4.63226232806487,3.40996199274711,0.828503090142008,1.17263029990548,0.540186184383045,0.473489471170421,0.983821158737019,0.617068451549513,0.697601834251224,0.804820204198858,2.10177616260905,0.822799249567402,0.985004784474571,0.891756905004413,0.438599962275997,2.63460138349261,1.20785776884335,0,0.102904612379284,0.991256348951394,5.28901133327089,0.639864751605702,0.928946687441754,1.28867461322093,2.42020229548011,3.55804870151792,3.80451252225118,5.21981967698963,4.6115707322723,6.78605063760728,8.35617182572834,10.1381325301942,4.49409704327111,15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| ||
|EntrezGene=211329 | |||
|HGNC= | |||
|MCL_coexpression_id=1889 | |||
|UniProt=Q6DFV7,A9Q6S9 | |||
|association_with_transcript=56bp_to_ENSMUST00000092610,ENSMUST00000105514,NM_001111267,uc007eth.2,uc007eti.2,uc007etj.2,uc007etm.2,uc007etn.2_5end | |||
|description=CAGE_peak_3_at_Ncoa7_5end | |||
|id=chr10:30375579..30375616,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.13e-14!130;UBERON:0000925!3.13e-14!130;UBERON:0006595!3.13e-14!130;UBERON:0001007!6.41e-14!128;UBERON:0001555!6.41e-14!128;UBERON:0007026!6.41e-14!128;UBERON:0004921!2.49e-13!126;UBERON:0004185!2.49e-13!126;UBERON:0003104!1.54e-09!131;UBERON:0009142!1.54e-09!131;UBERON:0004177!3.18e-08!29;UBERON:0001004!6.96e-08!42;UBERON:0000065!1.04e-07!41;UBERON:0000077!1.40e-07!97;UBERON:0000926!3.04e-07!193;UBERON:0004120!3.04e-07!193;UBERON:0006603!3.04e-07!193;UBERON:0005409!3.24e-07!59;UBERON:0003408!3.53e-07!24;UBERON:0006562!3.70e-07!24;UBERON:0001557!3.70e-07!24;UBERON:0001042!3.70e-07!24;UBERON:0008814!3.70e-07!24;UBERON:0009145!3.70e-07!24;UBERON:0002193!4.11e-07!48;UBERON:0002370!5.02e-07!23;UBERON:0000974!5.02e-07!23;UBERON:0004807!5.02e-07!23;UBERON:0005058!5.02e-07!23;UBERON:0003351!5.02e-07!23;UBERON:0009113!5.02e-07!23;UBERON:0003295!5.02e-07!23;UBERON:0009722!5.02e-07!23;UBERON:0005562!5.02e-07!23;UBERON:0007690!5.02e-07!23;UBERON:0001041!5.90e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.96e-14,118;UBERON:0000925,1.96e-14,118;UBERON:0006595,1.96e-14,118;UBERON:0001007,4.07e-14,116;UBERON:0001555,4.07e-14,116;UBERON:0007026,4.07e-14,116;UBERON:0004921,1.68e-13,114;UBERON:0000077,2.56e-10,35;UBERON:0004177,1.99e-09,29;UBERON:0005057,1.99e-09,29;UBERON:0001004,1.17e-08,42;UBERON:0000065,1.80e-08,41;UBERON:0003408,2.60e-08,24;UBERON:0006562,2.75e-08,24;UBERON:0001557,2.75e-08,24;UBERON:0001042,2.75e-08,24;UBERON:0008814,2.75e-08,24;UBERON:0009145,2.75e-08,24;UBERON:0002193,3.26e-08,48;UBERON:0002405,3.26e-08,48;UBERON:0002370,3.75e-08,23;UBERON:0000974,3.75e-08,23;UBERON:0004807,3.75e-08,23;UBERON:0005058,3.75e-08,23;UBERON:0003351,3.75e-08,23;UBERON:0009113,3.75e-08,23;UBERON:0003295,3.75e-08,23;UBERON:0009722,3.75e-08,23;UBERON:0005562,3.75e-08,23;UBERON:0007690,3.75e-08,23;UBERON:0000072,1.03e-07,27;UBERON:0001041,2.17e-07,80;UBERON:0002390,3.60e-07,45;UBERON:0003061,3.60e-07,45;UBERON:0005409,4.55e-07,47 | |||
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| |||
|short_description=p3@Ncoa7 | |||
}} | |||
Revision as of 16:33, 12 September 2013
| Short description: | p3@Ncoa7 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Ncoa7_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1889 |
| Association with transcript: | 56bp_to_ENSMUST00000092610, ENSMUST00000105514, NM_001111267, uc007eth.2, uc007eti.2, uc007etj.2, uc007etm.2, uc007etn.2_5end |
| EntrezGene: | Ncoa7 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
