FFCP PHASE1:Mm9::chr10:61247082..61247098,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=404634|HGNC=|MCL_coexpression_id=22|UniProt=Q8CCK0|association_with_transcript=-187bp_to_ENSMUST00000020283_5end|description=CAGE_peak_4_at_H2afy2_5end|id=chr10:61247082..61247098,-|ontology_enrichment_celltype=CL:0000117!4.56e-13!23;CL:0000337!4.56e-13!23;CL:0000540!2.64e-08!33;CL:0000047!2.64e-08!33;CL:0000031!2.64e-08!33;CL:0000404!2.64e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.28e-31,23;CL:0000337,1.28e-31,23;CL:0000540,4.08e-21,33;CL:0000047,4.08e-21,33;CL:0000031,4.08e-21,33;CL:0000404,4.08e-21,33;CL:0002609,1.06e-20,6;CL:0000393,2.13e-17,39;CL:0000211,2.13e-17,39;CL:0002319,1.71e-15,43;CL:0000221,4.51e-15,44;CL:0000133,4.51e-15,44;CL:0002608,1.45e-11,3;CL:0000120,1.99e-11,3;CL:0002613,2.16e-11,3;CL:0002321,2.43e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.02e-17!71;UBERON:0003075!1.02e-17!71;UBERON:0007284!1.02e-17!71;UBERON:0003056!5.03e-17!49;UBERON:0000033!1.48e-15!63;UBERON:0001049!3.79e-15!52;UBERON:0005068!3.79e-15!52;UBERON:0006241!3.79e-15!52;UBERON:0007135!3.79e-15!52;UBERON:0001017!1.87e-13!73;UBERON:0005743!1.87e-13!73;UBERON:0004121!3.02e-13!102;UBERON:0000924!3.02e-13!102;UBERON:0006601!3.02e-13!102;UBERON:0003080!4.47e-13!40;UBERON:0000153!5.30e-13!94;UBERON:0000955!6.23e-13!50;UBERON:0006238!6.23e-13!50;UBERON:0002780!9.26e-13!39;UBERON:0001890!9.26e-13!39;UBERON:0006240!9.26e-13!39;UBERON:0000073!1.26e-12!75;UBERON:0001016!1.26e-12!75;UBERON:0002616!1.41e-12!49;UBERON:0002020!8.94e-12!34;UBERON:0007811!7.46e-10!86;UBERON:0002791!1.26e-09!29;UBERON:0003528!1.26e-09!29;UBERON:0001893!1.26e-09!29|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.10e-25,34;UBERON:0003528,2.39e-20,29;UBERON:0002791,2.39e-20,29;UBERON:0001893,2.39e-20,29;UBERON:0001049,1.29e-15,52;UBERON:0005068,1.29e-15,52;UBERON:0006241,1.29e-15,52;UBERON:0007135,1.29e-15,52;UBERON:0001017,5.04e-15,73;UBERON:0000073,6.53e-15,54;UBERON:0001016,1.62e-14,75;UBERON:0002780,2.04e-14,39;UBERON:0001890,2.04e-14,39;UBERON:0006240,2.04e-14,39;UBERON:0000956,3.79e-14,21;UBERON:0001869,3.79e-14,21;UBERON:0000203,3.79e-14,21;UBERON:0003080,5.49e-14,40;UBERON:0002346,1.03e-13,64;UBERON:0003075,1.03e-13,64;UBERON:0007284,1.03e-13,64;UBERON:0003056,1.12e-12,49;UBERON:0004121,5.86e-12,95;UBERON:0000924,5.86e-12,95;UBERON:0006601,5.86e-12,95;UBERON:0000369,7.81e-12,5;UBERON:0002435,7.81e-12,5;UBERON:0000204,7.81e-12,5;UBERON:0010082,7.81e-12,5;UBERON:0002616,8.44e-12,46;UBERON:0010371,1.41e-11,73;UBERON:0000955,1.72e-11,47;UBERON:0006238,1.72e-11,47;UBERON:0002619,1.07e-08,17;UBERON:0010314,1.92e-08,92;UBERON:0001954,4.19e-08,7;UBERON:0003022,4.19e-08,7;UBERON:0002421,4.19e-08,7;UBERON:0000349,4.19e-08,7;UBERON:0002600,4.19e-08,7;UBERON:0002420,2.11e-07,8;UBERON:0007245,2.11e-07,8;UBERON:0010009,2.11e-07,8;UBERON:0010011,2.11e-07,8;UBERON:0000454,2.11e-07,8;UBERON:0002102,2.91e-07,7;UBERON:0004710,2.91e-07,7;UBERON:0005419,2.91e-07,7;UBERON:0005417,2.91e-07,7;UBERON:0005729,2.91e-07,7|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,3.03474691289397,4.23192783417626,1.90149421051854,0,0,0,0,0,0,0,1.8664130215526,1.75507719831198,2.73422449756797,2.28520787523043,0.883474163806454,2.69479758272899,3.06705507258356,3.67687514644008,0,0.127687338085188,0.921639199537461,2.90149833006426,2.47016637726506,3.12548022334056,0,0.56276261003168,0.30559649555362,0,2.13557521198654,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0.304465478312141,0,0,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.915001205637253,3.26701315493447,0.869121600961382,0.255715457330331,0.41557608911912,0.486723789203273,0.101839363850316,0,0,0.841767423545896,0,0.919608417733892,0.360124259610698,0.60281927134286,0.748401490664606,0.384341160854549,0.749613796477831,1.81092359517311,1.07783996466421,0.945530400839096,0.879755620819744,1.53437012699302,1.11218899690239,1.0447564995665,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0,0,1.02904612379284,0,0,0.426576501070468,0,0.257734922644187,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.456994050438915,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0,0.469380496577004,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0.445597348164788,0,0,0,0,0.321321316421807,0,0.178065603667255,0.488660878060728,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.517434735131018,0.428674070063185,0.354680467284547,0.178368817602071,0,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.432021363287205,0.418176592028937,0,0,0,0,0,0,0,0.448549638131936,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0.202725215290164,0.308132871494482,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,1.03111909406213,0.685082519770642,0,0,0,0,0.51776031175182,1.14166082342594,0.798049746802062,0.853668028770671,0.243106717068294,0.419226325255965,0.367687016900028,0.44449345560323,0.412070114477788,0.962757628775446,0,0,0.188626341386076,0.280924522409647,0.256100609619477,0.17230640686684,0.952587382566147,0.811190281613988,0,0.412085900803307,0.147198920134397,0,0.354951612318675,0,0.726732083161643,0.376437521661322,0.338458431566706,0.548783918618318,0,0.135804113845862,0,0.355905054372522,0.29551344712669,1.22769312950907,0.154936841185966,0.192906610981141,0.749431733813838,0.233931608445408,0,0.382576664137687,0,0|short_description=p4@H2afy2}} | ||
|EntrezGene=404634 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=Q8CCK0 | |||
|association_with_transcript=-187bp_to_ENSMUST00000020283_5end | |||
|description=CAGE_peak_4_at_H2afy2_5end | |||
|id=chr10:61247082..61247098,- | |||
|ontology_enrichment_celltype=CL:0000117!4.56e-13!23;CL:0000337!4.56e-13!23;CL:0000540!2.64e-08!33;CL:0000047!2.64e-08!33;CL:0000031!2.64e-08!33;CL:0000404!2.64e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.28e-31,23;CL:0000337,1.28e-31,23;CL:0000540,4.08e-21,33;CL:0000047,4.08e-21,33;CL:0000031,4.08e-21,33;CL:0000404,4.08e-21,33;CL:0002609,1.06e-20,6;CL:0000393,2.13e-17,39;CL:0000211,2.13e-17,39;CL:0002319,1.71e-15,43;CL:0000221,4.51e-15,44;CL:0000133,4.51e-15,44;CL:0002608,1.45e-11,3;CL:0000120,1.99e-11,3;CL:0002613,2.16e-11,3;CL:0002321,2.43e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.02e-17!71;UBERON:0003075!1.02e-17!71;UBERON:0007284!1.02e-17!71;UBERON:0003056!5.03e-17!49;UBERON:0000033!1.48e-15!63;UBERON:0001049!3.79e-15!52;UBERON:0005068!3.79e-15!52;UBERON:0006241!3.79e-15!52;UBERON:0007135!3.79e-15!52;UBERON:0001017!1.87e-13!73;UBERON:0005743!1.87e-13!73;UBERON:0004121!3.02e-13!102;UBERON:0000924!3.02e-13!102;UBERON:0006601!3.02e-13!102;UBERON:0003080!4.47e-13!40;UBERON:0000153!5.30e-13!94;UBERON:0000955!6.23e-13!50;UBERON:0006238!6.23e-13!50;UBERON:0002780!9.26e-13!39;UBERON:0001890!9.26e-13!39;UBERON:0006240!9.26e-13!39;UBERON:0000073!1.26e-12!75;UBERON:0001016!1.26e-12!75;UBERON:0002616!1.41e-12!49;UBERON:0002020!8.94e-12!34;UBERON:0007811!7.46e-10!86;UBERON:0002791!1.26e-09!29;UBERON:0003528!1.26e-09!29;UBERON:0001893!1.26e-09!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.10e-25,34;UBERON:0003528,2.39e-20,29;UBERON:0002791,2.39e-20,29;UBERON:0001893,2.39e-20,29;UBERON:0001049,1.29e-15,52;UBERON:0005068,1.29e-15,52;UBERON:0006241,1.29e-15,52;UBERON:0007135,1.29e-15,52;UBERON:0001017,5.04e-15,73;UBERON:0000073,6.53e-15,54;UBERON:0001016,1.62e-14,75;UBERON:0002780,2.04e-14,39;UBERON:0001890,2.04e-14,39;UBERON:0006240,2.04e-14,39;UBERON:0000956,3.79e-14,21;UBERON:0001869,3.79e-14,21;UBERON:0000203,3.79e-14,21;UBERON:0003080,5.49e-14,40;UBERON:0002346,1.03e-13,64;UBERON:0003075,1.03e-13,64;UBERON:0007284,1.03e-13,64;UBERON:0003056,1.12e-12,49;UBERON:0004121,5.86e-12,95;UBERON:0000924,5.86e-12,95;UBERON:0006601,5.86e-12,95;UBERON:0000369,7.81e-12,5;UBERON:0002435,7.81e-12,5;UBERON:0000204,7.81e-12,5;UBERON:0010082,7.81e-12,5;UBERON:0002616,8.44e-12,46;UBERON:0010371,1.41e-11,73;UBERON:0000955,1.72e-11,47;UBERON:0006238,1.72e-11,47;UBERON:0002619,1.07e-08,17;UBERON:0010314,1.92e-08,92;UBERON:0001954,4.19e-08,7;UBERON:0003022,4.19e-08,7;UBERON:0002421,4.19e-08,7;UBERON:0000349,4.19e-08,7;UBERON:0002600,4.19e-08,7;UBERON:0002420,2.11e-07,8;UBERON:0007245,2.11e-07,8;UBERON:0010009,2.11e-07,8;UBERON:0010011,2.11e-07,8;UBERON:0000454,2.11e-07,8;UBERON:0002102,2.91e-07,7;UBERON:0004710,2.91e-07,7;UBERON:0005419,2.91e-07,7;UBERON:0005417,2.91e-07,7;UBERON:0005729,2.91e-07,7 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,3.03474691289397,4.23192783417626,1.90149421051854,0,0,0,0,0,0,0,1.8664130215526,1.75507719831198,2.73422449756797,2.28520787523043,0.883474163806454,2.69479758272899,3.06705507258356,3.67687514644008,0,0.127687338085188,0.921639199537461,2.90149833006426,2.47016637726506,3.12548022334056,0,0.56276261003168,0.30559649555362,0,2.13557521198654,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0.304465478312141,0,0,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.915001205637253,3.26701315493447,0.869121600961382,0.255715457330331,0.41557608911912,0.486723789203273,0.101839363850316,0,0,0.841767423545896,0,0.919608417733892,0.360124259610698,0.60281927134286,0.748401490664606,0.384341160854549,0.749613796477831,1.81092359517311,1.07783996466421,0.945530400839096,0.879755620819744,1.53437012699302,1.11218899690239,1.0447564995665,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0,0,1.02904612379284,0,0,0.426576501070468,0,0.257734922644187,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.456994050438915,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0,0.469380496577004,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0.445597348164788,0,0,0,0,0.321321316421807,0,0.178065603667255,0.488660878060728,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.517434735131018,0.428674070063185,0.354680467284547,0.178368817602071,0,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.432021363287205,0.418176592028937,0,0,0,0,0,0,0,0.448549638131936,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0.202725215290164,0.308132871494482,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,1.03111909406213,0.685082519770642,0,0,0,0,0.51776031175182,1.14166082342594,0.798049746802062,0.853668028770671,0.243106717068294,0.419226325255965,0.367687016900028,0.44449345560323,0.412070114477788,0.962757628775446,0,0,0.188626341386076,0.280924522409647,0.256100609619477,0.17230640686684,0.952587382566147,0.811190281613988,0,0.412085900803307,0.147198920134397,0,0.354951612318675,0,0.726732083161643,0.376437521661322,0.338458431566706,0.548783918618318,0,0.135804113845862,0,0.355905054372522,0.29551344712669,1.22769312950907,0.154936841185966,0.192906610981141,0.749431733813838,0.233931608445408,0,0.382576664137687,0,0 | |||
|short_description=p4@H2afy2 | |||
}} |
Revision as of 17:03, 12 September 2013
Short description: | p4@H2afy2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_H2afy2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -187bp_to_ENSMUST00000020283_5end |
EntrezGene: | H2afy2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.28e-31 | 23 |
neuroblast (sensu Vertebrata) | 1.28e-31 | 23 |
neuron | 4.08e-21 | 33 |
neuronal stem cell | 4.08e-21 | 33 |
neuroblast | 4.08e-21 | 33 |
electrically signaling cell | 4.08e-21 | 33 |
neuron of cerebral cortex | 1.06e-20 | 6 |
electrically responsive cell | 2.13e-17 | 39 |
electrically active cell | 2.13e-17 | 39 |
neural cell | 1.71e-15 | 43 |
ectodermal cell | 4.51e-15 | 44 |
neurectodermal cell | 4.51e-15 | 44 |
hippocampal neuron | 1.45e-11 | 3 |
granule cell | 1.99e-11 | 3 |
striatum neuron | 2.16e-11 | 3 |
embryonic cell | 2.43e-08 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.