FFCP PHASE1:Mm9::chr10:77815034..77815062,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=28169|HGNC=|MCL_coexpression_id=519|UniProt=D3YV65|association_with_transcript=-77bp_to_ENSMUST00000146899_5end|description=CAGE_peak_4_at_Agpat3_5end|id=chr10:77815034..77815062,-|ontology_enrichment_celltype=CL:0002319!2.11e-11!43;CL:0000221!2.22e-11!44;CL:0000133!2.22e-11!44;CL:0000055!2.95e-11!50;CL:0002321!8.90e-08!70;CL:0000220!8.90e-08!70;CL:0000540!8.98e-07!33;CL:0000047!8.98e-07!33;CL:0000031!8.98e-07!33;CL:0000404!8.98e-07!33|ontology_enrichment_celltype_v019_2=CL:0002319,2.01e-11,43;CL:0000221,2.12e-11,44;CL:0000133,2.12e-11,44;CL:0002321,7.75e-08,70;CL:0000540,8.75e-07,33;CL:0000047,8.75e-07,33;CL:0000031,8.75e-07,33;CL:0000404,8.75e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.43e-23!75;UBERON:0001016!5.43e-23!75;UBERON:0001017!1.93e-22!73;UBERON:0005743!1.93e-22!73;UBERON:0004121!1.15e-16!102;UBERON:0000924!1.15e-16!102;UBERON:0006601!1.15e-16!102;UBERON:0001049!6.33e-16!52;UBERON:0005068!6.33e-16!52;UBERON:0006241!6.33e-16!52;UBERON:0007135!6.33e-16!52;UBERON:0000955!4.24e-15!50;UBERON:0006238!4.24e-15!50;UBERON:0002616!1.46e-14!49;UBERON:0002346!8.12e-13!71;UBERON:0003075!8.12e-13!71;UBERON:0007284!8.12e-13!71;UBERON:0000033!1.55e-12!63;UBERON:0007811!1.51e-11!86;UBERON:0002020!1.68e-11!34;UBERON:0000153!2.90e-10!94;UBERON:0003080!6.63e-10!40;UBERON:0002780!2.18e-09!39;UBERON:0001890!2.18e-09!39;UBERON:0006240!2.18e-09!39;UBERON:0002791!3.15e-09!29;UBERON:0003528!3.15e-09!29;UBERON:0001893!3.15e-09!29;UBERON:0000025!3.25e-09!114;UBERON:0003056!9.45e-09!49;UBERON:0004111!1.21e-07!122;UBERON:0003076!1.82e-07!12;UBERON:0003057!1.82e-07!12;UBERON:0000475!3.45e-07!200;UBERON:0000956!5.31e-07!21;UBERON:0001869!5.31e-07!21;UBERON:0000203!5.31e-07!21;UBERON:0002619!8.43e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.88e-23,75;UBERON:0001017,1.74e-22,73;UBERON:0004121,1.09e-18,95;UBERON:0000924,1.09e-18,95;UBERON:0006601,1.09e-18,95;UBERON:0000073,4.90e-17,54;UBERON:0001049,5.90e-16,52;UBERON:0005068,5.90e-16,52;UBERON:0006241,5.90e-16,52;UBERON:0007135,5.90e-16,52;UBERON:0002346,3.45e-15,64;UBERON:0003075,3.45e-15,64;UBERON:0007284,3.45e-15,64;UBERON:0000955,1.39e-13,47;UBERON:0006238,1.39e-13,47;UBERON:0010371,4.28e-13,73;UBERON:0002616,4.65e-13,46;UBERON:0002020,1.60e-11,34;UBERON:0003080,6.36e-10,40;UBERON:0011216,7.59e-10,194;UBERON:0002780,2.10e-09,39;UBERON:0001890,2.10e-09,39;UBERON:0006240,2.10e-09,39;UBERON:0003528,3.03e-09,29;UBERON:0002791,3.03e-09,29;UBERON:0001893,3.03e-09,29;UBERON:0000025,3.99e-09,114;UBERON:0003056,9.12e-09,49;UBERON:0004111,1.55e-07,122;UBERON:0010314,1.59e-07,92;UBERON:0003076,1.77e-07,12;UBERON:0003057,1.77e-07,12;UBERON:0000956,5.17e-07,21;UBERON:0001869,5.17e-07,21;UBERON:0000203,5.17e-07,21;UBERON:0002619,8.21e-07,17|phase1_expression=3.04282809499109,2.79180326111489,4.54999239389536,6.65421264875026,8.5152274090879,2.51818907867835,1.86890112476421,2.7115897922731,2.67498572088167,3.27690336850791,2.22583358693156,1.83475965689274,1.88320802924326,1.48614684112296,0.999329285446988,0,0,0.630924330716475,0.685572168028694,0.42438965179803,4.33720779770456,0.0992909512008853,0.261199789138935,0.95995453676044,0.68822784320151,2.8711598205751,3.4460959692726,3.01659725760245,0.570070258369122,0.756090389279792,1.33038306393183,1.27006134691926,0.61506478758457,0,0.577703239502549,0.664938581433969,0.816677425049476,0,0,0,0,0,0,3.14742044938943,4.1564541800001,2.38610777810186,11.7358701652206,12.4274339136855,13.6205433295373,14.5822424305713,5.31948402176378,11.5002051491977,1.51004345451963,2.17608642603403,3.02484419228218,2.82985379639542,1.71920063963254,5.15672092277442,2.02316460859598,5.81890077199236,3.1691570175309,1.69422266034566,4.4464739805557,10.7987966073768,9.88866362566974,12.7886420690298,10.4860038681442,24.974189845901,2.69592992002042,3.64516033495565,3.36519938162211,12.5686433137674,11.2642955885323,1.95985278743926,2.30029130443767,2.75765635983006,7.70811166995721,9.3211756802187,8.60196586234964,4.2203612073662,2.74462930807229,3.64639359389732,8.37548997004143,7.31591393041184,7.02871939773326,9.42811473515737,6.54909731675874,4.10078780815661,5.30083353332288,4.08086424576642,3.47837386442013,6.0229671388697,6.11974200336975,3.77792234146472,9.74664626171504,7.16843019355737,2.52799956237153,1.1930122580464,2.59786004602869,2.47337702157238,3.23939865486365,1.28326477414318,0,0,2.16491041011214,1.52015919285059,1.51657333504435,3.88225191044804,3.10725460376606,1.92974780784272,1.90833859442749,2.13125834818499,1.61430848079241,1.20578112442098,2.58695155698551,3.89566433121994,5.43828929015623,4.48258006451726,0.884610551949874,2.58826959915855,1.54589062922275,0.969750506270444,1.86391761218122,7.02673912827713,7.74952815209784,2.04365644166873,0.239630249011841,0,0,9.8861822007183,10.980014467647,5.40313714085317,6.95297280769106,9.71718737855256,7.89594569326328,10.5456820994042,2.54598409625791,2.48813941220186,8.33985102831127,2.1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| ||
|EntrezGene=28169 | |||
|HGNC= | |||
|MCL_coexpression_id=519 | |||
|UniProt=D3YV65 | |||
|association_with_transcript=-77bp_to_ENSMUST00000146899_5end | |||
|description=CAGE_peak_4_at_Agpat3_5end | |||
|id=chr10:77815034..77815062,- | |||
|ontology_enrichment_celltype=CL:0002319!2.11e-11!43;CL:0000221!2.22e-11!44;CL:0000133!2.22e-11!44;CL:0000055!2.95e-11!50;CL:0002321!8.90e-08!70;CL:0000220!8.90e-08!70;CL:0000540!8.98e-07!33;CL:0000047!8.98e-07!33;CL:0000031!8.98e-07!33;CL:0000404!8.98e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.01e-11,43;CL:0000221,2.12e-11,44;CL:0000133,2.12e-11,44;CL:0002321,7.75e-08,70;CL:0000540,8.75e-07,33;CL:0000047,8.75e-07,33;CL:0000031,8.75e-07,33;CL:0000404,8.75e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.43e-23!75;UBERON:0001016!5.43e-23!75;UBERON:0001017!1.93e-22!73;UBERON:0005743!1.93e-22!73;UBERON:0004121!1.15e-16!102;UBERON:0000924!1.15e-16!102;UBERON:0006601!1.15e-16!102;UBERON:0001049!6.33e-16!52;UBERON:0005068!6.33e-16!52;UBERON:0006241!6.33e-16!52;UBERON:0007135!6.33e-16!52;UBERON:0000955!4.24e-15!50;UBERON:0006238!4.24e-15!50;UBERON:0002616!1.46e-14!49;UBERON:0002346!8.12e-13!71;UBERON:0003075!8.12e-13!71;UBERON:0007284!8.12e-13!71;UBERON:0000033!1.55e-12!63;UBERON:0007811!1.51e-11!86;UBERON:0002020!1.68e-11!34;UBERON:0000153!2.90e-10!94;UBERON:0003080!6.63e-10!40;UBERON:0002780!2.18e-09!39;UBERON:0001890!2.18e-09!39;UBERON:0006240!2.18e-09!39;UBERON:0002791!3.15e-09!29;UBERON:0003528!3.15e-09!29;UBERON:0001893!3.15e-09!29;UBERON:0000025!3.25e-09!114;UBERON:0003056!9.45e-09!49;UBERON:0004111!1.21e-07!122;UBERON:0003076!1.82e-07!12;UBERON:0003057!1.82e-07!12;UBERON:0000475!3.45e-07!200;UBERON:0000956!5.31e-07!21;UBERON:0001869!5.31e-07!21;UBERON:0000203!5.31e-07!21;UBERON:0002619!8.43e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.88e-23,75;UBERON:0001017,1.74e-22,73;UBERON:0004121,1.09e-18,95;UBERON:0000924,1.09e-18,95;UBERON:0006601,1.09e-18,95;UBERON:0000073,4.90e-17,54;UBERON:0001049,5.90e-16,52;UBERON:0005068,5.90e-16,52;UBERON:0006241,5.90e-16,52;UBERON:0007135,5.90e-16,52;UBERON:0002346,3.45e-15,64;UBERON:0003075,3.45e-15,64;UBERON:0007284,3.45e-15,64;UBERON:0000955,1.39e-13,47;UBERON:0006238,1.39e-13,47;UBERON:0010371,4.28e-13,73;UBERON:0002616,4.65e-13,46;UBERON:0002020,1.60e-11,34;UBERON:0003080,6.36e-10,40;UBERON:0011216,7.59e-10,194;UBERON:0002780,2.10e-09,39;UBERON:0001890,2.10e-09,39;UBERON:0006240,2.10e-09,39;UBERON:0003528,3.03e-09,29;UBERON:0002791,3.03e-09,29;UBERON:0001893,3.03e-09,29;UBERON:0000025,3.99e-09,114;UBERON:0003056,9.12e-09,49;UBERON:0004111,1.55e-07,122;UBERON:0010314,1.59e-07,92;UBERON:0003076,1.77e-07,12;UBERON:0003057,1.77e-07,12;UBERON:0000956,5.17e-07,21;UBERON:0001869,5.17e-07,21;UBERON:0000203,5.17e-07,21;UBERON:0002619,8.21e-07,17 | |||
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| |||
|short_description=p4@Agpat3 | |||
}} |
Revision as of 17:28, 12 September 2013
Short description: | p4@Agpat3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Agpat3_5end |
Coexpression cluster: | MCL_coexpression_mm9:519 |
Association with transcript: | -77bp_to_ENSMUST00000146899_5end |
EntrezGene: | Agpat3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.01e-11 | 43 |
ectodermal cell | 2.12e-11 | 44 |
neurectodermal cell | 2.12e-11 | 44 |
embryonic cell | 7.75e-08 | 70 |
neuron | 8.75e-07 | 33 |
neuronal stem cell | 8.75e-07 | 33 |
neuroblast | 8.75e-07 | 33 |
electrically signaling cell | 8.75e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.