FFCP PHASE1:Mm9::chr10:85811710..85811749,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=323|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:85811710..85811749,+|id=chr10:85811710..85811749,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002605,3.20e-13,2;CL:0002604,3.20e-13,2;CL:0002453,2.26e-12,8;CL:0000333,6.11e-10,10;CL:0000095,6.11e-10,10;CL:0000243,6.11e-10,10;CL:0000123,6.11e-10,10;CL:0000125,6.11e-10,10;CL:0000030,6.11e-10,10;CL:0000339,6.11e-10,10;CL:0000128,7.51e-10,6;CL:0000126,7.51e-10,6;CL:0000127,7.51e-10,6;CL:0000680,9.21e-10,6;CL:0000187,9.21e-10,6;CL:0000056,9.21e-10,6;CL:0000192,3.12e-09,3;CL:0000359,3.12e-09,3;CL:0002539,3.12e-09,3;CL:0000514,3.12e-09,3;CL:0000222,1.94e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!6.90e-07!23;UBERON:0001009!6.90e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.12e-09,3;UBERON:0004237,3.12e-09,3;UBERON:0004695,3.12e-09,3;UBERON:0002111,3.12e-09,3;UBERON:0004178,3.12e-09,3;UBERON:0000947,3.95e-07,4;UBERON:0001637,3.95e-07,4;UBERON:0004573,3.95e-07,4;UBERON:0003509,3.95e-07,4;UBERON:0004571,3.95e-07,4;UBERON:0010191,3.95e-07,4;UBERON:0004572,3.95e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,3.4468156614635,0.917733760808408,0,0.872100625521786,2.19686182734472,1.94429899074283,0.419959264876088,2.87505128729943,0,0,0,0,0,1.54701627683233,0.202316460859598,0,0,0,0,1.3498495759221,0,0,0.599200221036809,1.15265491596466,0,0,0,0,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0,0,0.558365998002762,0,0.15279824777681,0.294628585473668,0.569486723196412,0,0.984440513331393,0.151143120213571,0.579728977403356,0,0,0,0,0,0.280888840263504,0.511290967734173,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0.304465478312141,0.691846491768175,1.20578112442098,0.23517741427141,0.502666365318702,0,0.289198713839823,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0.125654352112864,0,0,0,0.648965052271031,0.407357455401265,0.124406970610093,0,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0,0.776110112217047,0,0,0,0.219195732427575,0.556094498451196,0,0,0,0,0,0,0,0.703578179943289,0.36012412292203,0.23674473558521,0.590292695242212,0.154267112887378,0.232533944750408,0,1.05088808130453,0.16455984991348,0.164167464079095,0.324275238183423,0.292399974850665,0.219550115291051,0.536825675041487,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0.380451252225118,0,0,0.251335208800269,0,0,0,0,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.420814919341911,0.442655759869801,0.738050739898011,1.09899109488962,0.863780147452604,0,0,0,0,0,0,0,0.575392274901621,0.324270453550071,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0.670025029767263,0.476087281772027,1.56106918286239,0.945810864637146,0.664394068946325,0.797273843287435,1.47476983244164,0.690739927463582,2.02508682014116,0,0,0,0.275936746304732,0,0.117211686592203,0.491804836130026,0.252470927204373,0,0,0,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0,0,0.283880170416537,0,0.162886959353576,0.659880491890142,0,0.242780636154981,0,0,0,0,0.258428293168221,0.727067458955011,0.356497378384721,0,0,1.03135543248187,0,0,0.129358683782755,0,0.354680467284547,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0,0.247960367176008,0,0.129614973291793,0,0,0.448549638131936,0,0.388902376688095,0.258319646955462,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0.576060012515731,0,0,0,0,0.179026695667481,0.39736270956253,0,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0,0.365855945745545,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.382576664137687,0,0.463735671240843|short_description=p@chr10:85811710..85811749,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=323 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:85811710..85811749,+ | |||
|id=chr10:85811710..85811749,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.20e-13,2;CL:0002604,3.20e-13,2;CL:0002453,2.26e-12,8;CL:0000333,6.11e-10,10;CL:0000095,6.11e-10,10;CL:0000243,6.11e-10,10;CL:0000123,6.11e-10,10;CL:0000125,6.11e-10,10;CL:0000030,6.11e-10,10;CL:0000339,6.11e-10,10;CL:0000128,7.51e-10,6;CL:0000126,7.51e-10,6;CL:0000127,7.51e-10,6;CL:0000680,9.21e-10,6;CL:0000187,9.21e-10,6;CL:0000056,9.21e-10,6;CL:0000192,3.12e-09,3;CL:0000359,3.12e-09,3;CL:0002539,3.12e-09,3;CL:0000514,3.12e-09,3;CL:0000222,1.94e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!6.90e-07!23;UBERON:0001009!6.90e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.12e-09,3;UBERON:0004237,3.12e-09,3;UBERON:0004695,3.12e-09,3;UBERON:0002111,3.12e-09,3;UBERON:0004178,3.12e-09,3;UBERON:0000947,3.95e-07,4;UBERON:0001637,3.95e-07,4;UBERON:0004573,3.95e-07,4;UBERON:0003509,3.95e-07,4;UBERON:0004571,3.95e-07,4;UBERON:0010191,3.95e-07,4;UBERON:0004572,3.95e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,3.4468156614635,0.917733760808408,0,0.872100625521786,2.19686182734472,1.94429899074283,0.419959264876088,2.87505128729943,0,0,0,0,0,1.54701627683233,0.202316460859598,0,0,0,0,1.3498495759221,0,0,0.599200221036809,1.15265491596466,0,0,0,0,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0,0,0.558365998002762,0,0.15279824777681,0.294628585473668,0.569486723196412,0,0.984440513331393,0.151143120213571,0.579728977403356,0,0,0,0,0,0.280888840263504,0.511290967734173,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0.304465478312141,0.691846491768175,1.20578112442098,0.23517741427141,0.502666365318702,0,0.289198713839823,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0.125654352112864,0,0,0,0.648965052271031,0.407357455401265,0.124406970610093,0,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0,0.776110112217047,0,0,0,0.219195732427575,0.556094498451196,0,0,0,0,0,0,0,0.703578179943289,0.36012412292203,0.23674473558521,0.590292695242212,0.154267112887378,0.232533944750408,0,1.05088808130453,0.16455984991348,0.164167464079095,0.324275238183423,0.292399974850665,0.219550115291051,0.536825675041487,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0.380451252225118,0,0,0.251335208800269,0,0,0,0,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.420814919341911,0.442655759869801,0.738050739898011,1.09899109488962,0.863780147452604,0,0,0,0,0,0,0,0.575392274901621,0.324270453550071,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0.670025029767263,0.476087281772027,1.56106918286239,0.945810864637146,0.664394068946325,0.797273843287435,1.47476983244164,0.690739927463582,2.02508682014116,0,0,0,0.275936746304732,0,0.117211686592203,0.491804836130026,0.252470927204373,0,0,0,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0,0,0.283880170416537,0,0.162886959353576,0.659880491890142,0,0.242780636154981,0,0,0,0,0.258428293168221,0.727067458955011,0.356497378384721,0,0,1.03135543248187,0,0,0.129358683782755,0,0.354680467284547,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0,0.247960367176008,0,0.129614973291793,0,0,0.448549638131936,0,0.388902376688095,0.258319646955462,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0.576060012515731,0,0,0,0,0.179026695667481,0.39736270956253,0,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0,0.365855945745545,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.382576664137687,0,0.463735671240843 | |||
|short_description=p@chr10:85811710..85811749,+ | |||
}} |
Revision as of 17:51, 12 September 2013
Short description: | p@chr10:85811710..85811749, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:85811710..85811749, + |
Coexpression cluster: | MCL_coexpression_mm9:323 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.20e-13 | 2 |
astrocyte of the hippocampus | 3.20e-13 | 2 |
oligodendrocyte precursor cell | 2.26e-12 | 8 |
migratory neural crest cell | 6.11e-10 | 10 |
neuron associated cell | 6.11e-10 | 10 |
glial cell (sensu Vertebrata) | 6.11e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 6.11e-10 | 10 |
glial cell | 6.11e-10 | 10 |
glioblast | 6.11e-10 | 10 |
glioblast (sensu Vertebrata) | 6.11e-10 | 10 |
oligodendrocyte | 7.51e-10 | 6 |
macroglial cell | 7.51e-10 | 6 |
astrocyte | 7.51e-10 | 6 |
muscle precursor cell | 9.21e-10 | 6 |
muscle cell | 9.21e-10 | 6 |
myoblast | 9.21e-10 | 6 |
smooth muscle cell | 3.12e-09 | 3 |
vascular associated smooth muscle cell | 3.12e-09 | 3 |
aortic smooth muscle cell | 3.12e-09 | 3 |
smooth muscle myoblast | 3.12e-09 | 3 |
mesodermal cell | 1.94e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 3.12e-09 | 3 |
blood vessel smooth muscle | 3.12e-09 | 3 |
arterial system smooth muscle | 3.12e-09 | 3 |
artery smooth muscle tissue | 3.12e-09 | 3 |
aorta smooth muscle tissue | 3.12e-09 | 3 |
aorta | 3.95e-07 | 4 |
artery | 3.95e-07 | 4 |
systemic artery | 3.95e-07 | 4 |
arterial blood vessel | 3.95e-07 | 4 |
systemic arterial system | 3.95e-07 | 4 |
aortic system | 3.95e-07 | 4 |
arterial system | 3.95e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.