Personal tools

FFCP PHASE1:Mm9::chr11:53705140..53705158,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=20520|HGNC=|MCL_coexpression_id=24|UniProt=Q9Z0E8|association_with_transcript=3bp_to_ENSMUST00000019044_5end|description=CAGE_peak_1_at_Slc22a5_5end|id=chr11:53705140..53705158,-|ontology_enrichment_celltype=CL:0000066!7.05e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,3.95e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.33e-09!15;UBERON:0001242!2.04e-08!13;UBERON:0000060!2.04e-08!13;UBERON:0001262!2.04e-08!13;UBERON:0004786!2.04e-08!13;UBERON:0004923!3.61e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.95e-14,31;UBERON:0000344,1.82e-10,15;UBERON:0001242,3.74e-09,13;UBERON:0001262,3.74e-09,13;UBERON:0004786,3.74e-09,13;UBERON:0005409,7.96e-09,47;UBERON:0004923,7.97e-08,24|phase1_expression=1.60148847104794,303.259629238605,382.6543603266,193.577095236371,267.979215521296,43.3128521532676,31.7713191209915,24.9208014242242,5.20918271961167,5.14941957908386,0.34243593645101,0.319088635981346,0.684802919724823,1.04904482902797,1.66554880907831,0.202475267389826,0,1.10411757875383,1.37114433605739,0.84877930359606,31.2959307755937,0.297872853602656,1.04479915655574,48.3177116836088,46.1112654945012,214.762754579018,115.013452974473,100.194123198938,69.5485715210328,63.0075324399827,45.0112936630269,1.27006134691926,1.84519436275371,15.8481681015439,3.46621943701529,4.65457007003779,12.0459920194798,1.25559489221072,0,0.523523743973798,0.588231488031014,0,0,9.19046771221714,8.92116994731728,5.50640256485045,19.559783608701,2.61630187656536,8.34807494390993,10.8880743481599,6.57936181639204,1.43752564364972,2.18117387875057,4.35217285206807,3.02484419228218,0.771778308107841,0.85960031981627,0.515672092277442,0.202316460859598,0,0.633831403506179,3.38844532069132,5.33576877666684,0.899899717281399,0,1.4209602298922,1.79760066311043,3.45796474789399,0.103689612308478,0.270011876663381,0,1.14260393761521,1.54607978666129,0,0.0958454710182364,0,2.20231761998777,1.14918604276669,0.614426133024974,0.527545150920775,0.640413505216868,0.52091337055676,0.558365998002762,0.56276261003168,1.37518422999129,0.294628585473668,0.711858403995515,0,0.530083353332288,0.453429360640713,29.5661778475711,4.30211938490693,6.11974200336975,7.01614149129162,9.74664626171504,26.4335863387428,15.1679973742292,0.681721290312231,0.519572009205738,2.12003744706204,5.7745802108439,2.56652954828636,0,0,1.08245520505607,1.26679932737549,1.01104889002957,63.6004210035164,2.33044095282455,10.984718290797,1.38788261412909,2.43572382649713,4.84292544237723,2.26083960828934,3.17489509266403,6.53466274914312,38.8096099342967,25.4494868179045,0.884610551949874,0.970601099684455,1.76673214768315,0,13.0474232852686,0.585561594023094,0.83778682725382,27.3339049073193,1.31796636956512,1.19980546198682,0.889491589511453,0.898743836428936,1.37250180845588,0,0.695297280769106,0.255715457330331,0.41557608911912,0.486723789203273,0.611036183101898,2.98576729464223,24.7668303265001,14.7309299120532,0,0.459804208866946,0.720248519221397,0.30140963567143,0.816437989815934,1.15302348256365,0.562210347358373,6.20888089773638,0.215567992932842,0.378212160335639,0.175951124163949,0,0.556094498451196,0.348252166522167,0.205782136407943,0.995171334092466,0,0.257347907114715,1.70498099637356,0.414251545071004,0.938104239924385,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0.804820204198858,0.934122738937356,0.822799249567402,2.95501435342371,5.83695428730161,6.72519942156529,1.97595103761946,5.50246316917524,1.47202963994889,0.617427674275707,166.20064784085,46.5432997327838,1.06644125267617,0.696710015581316,0.644337306610467,1.61346819698674,3.55804870151792,11.4135375667535,21.8283368310475,29.97520975977,19.604146286421,16.5133871794155,20.2762650603885,35.9527763461689,25.5042898852139,37.438559371821,0.379335801906163,0.114248512609729,1.1270773567308,2.03651327845314,4.07300223052014,7.78507600782536,43.5699740786133,65.9817361468822,70.3354300729359,77.7402132707343,17.1942523710546,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,9.40384315295205,3.56929837144506,1.43768206527355,4.83783231969054,3.12037673114561,2.77836765741823,3.04975602987251,2.8946611281802,2.40179147216586,0.37898282354097,0.325929952884052,0.169745085775188,0.704070744865506,0.335012514883631,0.714130922658041,4.29294025287157,0.788175720530955,0.221464689648775,1.2756381492599,4.58817281204066,3.7990696010497,6.94315481191256,0,0.54390568381871,2.45882136509518,2.75936746304733,1.28440471990234,0.703270119553219,0.983609672260053,2.52470927204373,0.94652465824877,0,0.430846795465598,1.19484398976276,0.668396022247182,0.566153061577665,0.809621403349789,1.75353514746787,0.395287777946524,0.642642632843614,6.67118400478862,0.890328018336276,0.977321756121456,5.27904393512113,0,0.971122544619926,0,0.188605079755898,0.295301892880773,0,7.75284879504663,0.727067458955011,0.356497378384721,0.632073515871632,0,1.03135543248187,1.02131881726136,0.900305470156551,0.646793418913773,2.57204442037911,0.886701168211368,2.49716344642899,2.30368628842969,1.8267896946876,63.8307045933292,52.958017715955,1.98475558249466,4.78170133530292,1.13025098687134,1.02531972377865,2.50681922406587,9.02774948597837,23.3184669303881,0.741701208042039,0.512612642393558,0.619160603889667,0.370389054739423,1.13021074202815,0.27338845544205,1.14389086603261,0.509935289981566,1.39951452323658,1.52019971184866,4.77335309007557,0.158167996790568,0.406638934253697,0.540026704109006,0.836353184057875,0.436725127492355,5.93403124093211,6.11635572367486,4.4498510137285,33.4406631092826,1.24267862617385,3.38215763210514,2.0932316446157,2.31641886639937,3.30567020184881,2.45403664607689,2.02747350588934,0.938857909166032,1.3020438484395,1.8874681996628,3.8653459332161,9.79302021276743,0.316011120628178,0.608175645870493,0.205421914329655,0.51968329191118,0.895133478337407,0.596044064343795,0.240390899039938,0.443068581523732,0.201932899896295,0.533447646584999,0.907435666231565,0.682205165178267,0.384847366561318,0.701261413089414,1.36038230169127,0.887943813496259,0.269141569828427,1.34307693091263,4.44336066274038,9.94717119891265,5.12824547948342,6.85978813053011,1.50471631210609,0.564751842617067,2.76195141904306,0.572895513439397,1.20297227640581,0.685082519770642,0.755393897389701,0,0,0.906284817968409,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,1.28367683836726,0.758091635291392,0.50695859978048,1.50901073108861,1.49826411951812,1.60062881012173,1.55075766180156,0.952587382566147,1.85414921511769,0.77163688185482,1.23625770240992,1.32479028120958,2.05721551431249,3.01708870470874,1.1921809497366,2.32554266611726,1.41164070622996,0.676916863133412,0.548783918618318,1.05227884575137,1.08643291076689,1.68342681497322,0.711810108745045,0.985044823755635,1.63692417267876,1.23949472948773,1.15743966588685,0.749431733813838,1.16965804222704,4.08255002691767,6.50380329034067,3.30887128679273,3.94175320554716|short_description=p1@Slc22a5}}
|EntrezGene=20520
|HGNC=
|MCL_coexpression_id=24
|UniProt=Q9Z0E8
|association_with_transcript=3bp_to_ENSMUST00000019044_5end
|description=CAGE_peak_1_at_Slc22a5_5end
|id=chr11:53705140..53705158,-
|ontology_enrichment_celltype=CL:0000066!7.05e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000066,3.95e-08,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!1.33e-09!15;UBERON:0001242!2.04e-08!13;UBERON:0000060!2.04e-08!13;UBERON:0001262!2.04e-08!13;UBERON:0004786!2.04e-08!13;UBERON:0004923!3.61e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.95e-14,31;UBERON:0000344,1.82e-10,15;UBERON:0001242,3.74e-09,13;UBERON:0001262,3.74e-09,13;UBERON:0004786,3.74e-09,13;UBERON:0005409,7.96e-09,47;UBERON:0004923,7.97e-08,24
|phase1_expression=1.60148847104794,303.259629238605,382.6543603266,193.577095236371,267.979215521296,43.3128521532676,31.7713191209915,24.9208014242242,5.20918271961167,5.14941957908386,0.34243593645101,0.319088635981346,0.684802919724823,1.04904482902797,1.66554880907831,0.202475267389826,0,1.10411757875383,1.37114433605739,0.84877930359606,31.2959307755937,0.297872853602656,1.04479915655574,48.3177116836088,46.1112654945012,214.762754579018,115.013452974473,100.194123198938,69.5485715210328,63.0075324399827,45.0112936630269,1.27006134691926,1.84519436275371,15.8481681015439,3.46621943701529,4.65457007003779,12.0459920194798,1.25559489221072,0,0.523523743973798,0.588231488031014,0,0,9.19046771221714,8.92116994731728,5.50640256485045,19.559783608701,2.61630187656536,8.34807494390993,10.8880743481599,6.57936181639204,1.43752564364972,2.18117387875057,4.35217285206807,3.02484419228218,0.771778308107841,0.85960031981627,0.515672092277442,0.202316460859598,0,0.633831403506179,3.38844532069132,5.33576877666684,0.899899717281399,0,1.4209602298922,1.79760066311043,3.45796474789399,0.103689612308478,0.270011876663381,0,1.14260393761521,1.54607978666129,0,0.0958454710182364,0,2.20231761998777,1.14918604276669,0.614426133024974,0.527545150920775,0.640413505216868,0.52091337055676,0.558365998002762,0.56276261003168,1.37518422999129,0.294628585473668,0.711858403995515,0,0.530083353332288,0.453429360640713,29.5661778475711,4.30211938490693,6.11974200336975,7.01614149129162,9.74664626171504,26.4335863387428,15.1679973742292,0.681721290312231,0.519572009205738,2.12003744706204,5.7745802108439,2.56652954828636,0,0,1.08245520505607,1.26679932737549,1.01104889002957,63.6004210035164,2.33044095282455,10.984718290797,1.38788261412909,2.43572382649713,4.84292544237723,2.26083960828934,3.17489509266403,6.53466274914312,38.8096099342967,25.4494868179045,0.884610551949874,0.970601099684455,1.76673214768315,0,13.0474232852686,0.585561594023094,0.83778682725382,27.3339049073193,1.31796636956512,1.19980546198682,0.889491589511453,0.898743836428936,1.37250180845588,0,0.695297280769106,0.255715457330331,0.41557608911912,0.486723789203273,0.611036183101898,2.98576729464223,24.7668303265001,14.7309299120532,0,0.459804208866946,0.720248519221397,0.30140963567143,0.816437989815934,1.15302348256365,0.562210347358373,6.20888089773638,0.215567992932842,0.378212160335639,0.175951124163949,0,0.556094498451196,0.348252166522167,0.205782136407943,0.995171334092466,0,0.257347907114715,1.70498099637356,0.414251545071004,0.938104239924385,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0.804820204198858,0.934122738937356,0.822799249567402,2.95501435342371,5.83695428730161,6.72519942156529,1.97595103761946,5.50246316917524,1.47202963994889,0.617427674275707,166.20064784085,46.5432997327838,1.06644125267617,0.696710015581316,0.644337306610467,1.61346819698674,3.55804870151792,11.4135375667535,21.8283368310475,29.97520975977,19.604146286421,16.5133871794155,20.2762650603885,35.9527763461689,25.5042898852139,37.438559371821,0.379335801906163,0.114248512609729,1.1270773567308,2.03651327845314,4.07300223052014,7.78507600782536,43.5699740786133,65.9817361468822,70.3354300729359,77.7402132707343,17.1942523710546,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,9.40384315295205,3.56929837144506,1.43768206527355,4.83783231969054,3.12037673114561,2.77836765741823,3.04975602987251,2.8946611281802,2.40179147216586,0.37898282354097,0.325929952884052,0.169745085775188,0.704070744865506,0.335012514883631,0.714130922658041,4.29294025287157,0.788175720530955,0.221464689648775,1.2756381492599,4.58817281204066,3.7990696010497,6.94315481191256,0,0.54390568381871,2.45882136509518,2.75936746304733,1.28440471990234,0.703270119553219,0.983609672260053,2.52470927204373,0.94652465824877,0,0.430846795465598,1.19484398976276,0.668396022247182,0.566153061577665,0.809621403349789,1.75353514746787,0.395287777946524,0.642642632843614,6.67118400478862,0.890328018336276,0.977321756121456,5.27904393512113,0,0.971122544619926,0,0.188605079755898,0.295301892880773,0,7.75284879504663,0.727067458955011,0.356497378384721,0.632073515871632,0,1.03135543248187,1.02131881726136,0.900305470156551,0.646793418913773,2.57204442037911,0.886701168211368,2.49716344642899,2.30368628842969,1.8267896946876,63.8307045933292,52.958017715955,1.98475558249466,4.78170133530292,1.13025098687134,1.02531972377865,2.50681922406587,9.02774948597837,23.3184669303881,0.741701208042039,0.512612642393558,0.619160603889667,0.370389054739423,1.13021074202815,0.27338845544205,1.14389086603261,0.509935289981566,1.39951452323658,1.52019971184866,4.77335309007557,0.158167996790568,0.406638934253697,0.540026704109006,0.836353184057875,0.436725127492355,5.93403124093211,6.11635572367486,4.4498510137285,33.4406631092826,1.24267862617385,3.38215763210514,2.0932316446157,2.31641886639937,3.30567020184881,2.45403664607689,2.02747350588934,0.938857909166032,1.3020438484395,1.8874681996628,3.8653459332161,9.79302021276743,0.316011120628178,0.608175645870493,0.205421914329655,0.51968329191118,0.895133478337407,0.596044064343795,0.240390899039938,0.443068581523732,0.201932899896295,0.533447646584999,0.907435666231565,0.682205165178267,0.384847366561318,0.701261413089414,1.36038230169127,0.887943813496259,0.269141569828427,1.34307693091263,4.44336066274038,9.94717119891265,5.12824547948342,6.85978813053011,1.50471631210609,0.564751842617067,2.76195141904306,0.572895513439397,1.20297227640581,0.685082519770642,0.755393897389701,0,0,0.906284817968409,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,1.28367683836726,0.758091635291392,0.50695859978048,1.50901073108861,1.49826411951812,1.60062881012173,1.55075766180156,0.952587382566147,1.85414921511769,0.77163688185482,1.23625770240992,1.32479028120958,2.05721551431249,3.01708870470874,1.1921809497366,2.32554266611726,1.41164070622996,0.676916863133412,0.548783918618318,1.05227884575137,1.08643291076689,1.68342681497322,0.711810108745045,0.985044823755635,1.63692417267876,1.23949472948773,1.15743966588685,0.749431733813838,1.16965804222704,4.08255002691767,6.50380329034067,3.30887128679273,3.94175320554716
|short_description=p1@Slc22a5
}}

Revision as of 19:58, 12 September 2013

Short description:p1@Slc22a5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slc22a5_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 3bp_to_ENSMUST00000019044_5end
EntrezGene:Slc22a5
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p1@Slc22a5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5303.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6382.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I3193.58
CD326+ enterocyte, pool2.CNhs13197.11849-124I4267.98
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I743.31
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I831.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E924.92
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A331.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D148.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D246.11
GP2+ M cell, pool1.CNhs13228.11845-124H9214.76
GP2+ M cell, pool2.CNhs13231.11846-124I1115.01
GP2+ M cell, pool3.CNhs13240.11847-124I2100.19
Ileum epithelium, pool1.CNhs13199.10252-104B969.55
Ileum epithelium, pool2.CNhs13232.10253-104C163.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C845.01
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.47
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.05
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.19
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.92
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.51
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B719.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.35
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.18
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G329.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F626.43
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.77
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B663.60
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D710.98
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I14.84
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C13.17
adrenal gland, neonate N25.CNhs11223.1377-27I36.53
amnion, adult pregnant day17.5.CNhs10488.583-22A838.81
aorta, adult.CNhs10498.46-23H125.45
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H727.33
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B224.77
eyeball, adult.CNhs10484.31-12G414.73
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G15.84
heart, neonate N20.CNhs11127.821-26I66.73
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D25.50
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I3166.20
intestine, adult.CNhs10496.178-9A346.54
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F711.41
intestine, neonate N00.CNhs11126.644-26D121.83
intestine, neonate N01.CNhs11192.1322-23E929.98
intestine, neonate N06.CNhs11102.688-20B819.60
intestine, neonate N07.CNhs11095.720-20F216.51
intestine, neonate N10.CNhs11098.755-23A520.28
intestine, neonate N20.CNhs11187.827-18D135.95
intestine, neonate N25.CNhs11121.1352-25E325.50
intestine, neonate N30.CNhs11131.1384-42G137.44
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G77.79
kidney, neonate N10.CNhs11206.758-6D543.57
kidney, neonate N20.CNhs11113.832-19I165.98
kidney, neonate N25.CNhs11122.1353-25F370.34
kidney, neonate N30.CNhs11203.1385-42H177.74
liver, adult pregnant day01.CNhs10466.508-5B217.19
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F49.40
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C64.29
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A44.59
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H26.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I76.67
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G65.28
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I763.83
placenta, adult pregnant day17.CNhs10464.577-18G352.96
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C34.78
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C49.03
small intestine, neonate N16.CNhs11114.790-21I123.32
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B85.93
stomach, neonate N07.CNhs11210.718-18A96.12
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I133.44
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E29.79
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E44.44
uterus, adult pregnant day19.CNhs10497.590-15F59.95
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D56.86
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C66.50
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Cell type
Ontology termp-valuen
epithelial cell3.95e-0825

Uber anatomy
Ontology termp-valuen
intestine9.95e-1431
mucosa1.82e-1015
intestinal mucosa3.74e-0913
wall of intestine3.74e-0913
gastrointestinal system mucosa3.74e-0913
gastrointestinal system7.96e-0947
organ component layer7.97e-0824







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.