FFCP PHASE1:Mm9::chr11:70832735..70832769,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=116891|HGNC=|MCL_coexpression_id=200|UniProt=Q8BNI4,Q5QNV1,Q5QNV2|association_with_transcript=0bp_to_ENSMUST00000108523,ENSMUST00000140712,NM_033562,uc007jxi.1,uc007jxj.1_5end|description=CAGE_peak_1_at_Derl2_5end|id=chr11:70832735..70832769,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!6.55e-11!47;UBERON:0002100!7.87e-10!98;UBERON:0004119!3.12e-07!130;UBERON:0000925!3.12e-07!130;UBERON:0006595!3.12e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.15e-10,90;UBERON:0005256,1.62e-10,45;UBERON:0003104,5.65e-08,61;UBERON:0009142,5.65e-08,61;UBERON:0005177,3.79e-07,79|phase1_expression=18.7374151112609,17.4487703819681,20.0199665331396,9.37639055051173,13.5241847085514,14.9412552001582,16.1192722010913,14.8491821957813,11.2630977721333,12.1713553687437,13.5262194898149,17.4701028199787,12.3264525550468,13.3753215701066,9.32707333083856,7.89653542820321,9.79386629379405,13.0916798623669,12.8887567589394,15.7024171165271,23.3869047915442,10.9220046320974,10.1867917764185,25.2788028013583,27.5291137280604,20.6723507081407,29.2918157388171,24.7791917588772,30.9738173713889,29.4875251819119,40.3549529392655,7.62036808151557,6.76571266343027,0,17.908800424579,23.7715542862644,18.783580776138,22.600708059793,30.4720784364282,37.6937095661135,31.1762688656438,17.7591826089196,33.9857247121808,31.0965140399676,27.0676406356104,39.0954582104382,60.244133514799,36.4102011155346,36.9072786993913,38.4971200167081,27.7173114818218,40.250718022192,14.4293041209653,7.97898356212479,12.0993767691287,34.4727644288169,38.1089475118546,31.9716697212014,14.1621522601718,10.5798195854407,16.4796164911607,38.6282766558811,46.2433293977792,67.4924787961049,56.3653826663175,70.3375313796639,44.0412162462055,76.8436610643109,11.0947885170071,12.4205463265155,10.3059231062177,17.9960120174396,11.9269012113871,10.1667363348412,13.2266750005166,11.9498442259303,9.91042928994498,13.0241084846891,11.6740965274745,14.1118327871307,19.6698433745181,6.25096044668112,14.7966989470732,12.9435400307286,18.488587980994,11.7851434189467,11.6744778255264,11.5567656411686,29.7603939799413,24.4851854745985,7.53647670624362,59.3692475117157,82.2765313786378,127.909656418163,141.651259003592,86.9172160968831,32.1617722101712,30.1661670963162,26.2383864648897,27.2071472372962,21.6898866456088,24.3820307087204,5.09610479413291,0,22.2985772241551,25.589346412985,24.7706978057244,37.7948641870088,19.6792791571851,21.3756680253348,13.7053408145247,14.9188084372949,20.7553947530453,25.4721262533932,16.9327738275415,26.6413173618912,23.2363269670311,14.1707369781513,15.9229899350977,11.1619126463712,8.83366073841574,10.1823803158397,11.1835056730873,7.61230072230023,8.79676168616511,19.9256503062701,12.8202183221335,9.59844369589452,17.4086211090099,9.8861822007183,9.15001205637253,9.04711335212624,6.95297280769106,6.39288643325826,8.51930982694196,7.94982189032012,9.67473956578005,13.8091737377203,25.0195530849338,18.0979996062368,11.1903580947925,9.19608417733892,9.18316862007281,14.1662528765572,9.79725587779121,11.4021211053516,11.2442069471675,11.6416516832557,7.76044774558232,8.13156144721623,10.381116325673,10.5213951565236,11.9560317167007,12.537077994798,12.3469281844766,11.7430217422911,15.4486901208912,10.808612098818,22.7330799516474,8.28503090142008,12.195355119017,10.2635375032778,7.57583153872673,10.8220327461072,12.4956361438776,10.2314935690179,9.92611585178591,10.6256461554124,9.87359099480883,14.2825693748813,11.4307021459657,16.5205985790626,16.2467085315377,17.312628020088,10.9350773253346,9.77593817603202,30.0681092515256,16.9248362664668,12.5840067815788,11.8440702648824,9.02072229254653,14.5212137728807,18.0126215514345,20.7345932462689,17.5575752771469,23.2225526160855,20.3581519128218,17.7071260116624,21.6410136702223,27.8634016682809,23.7751854862164,20.1132685986911,11.9490777600441,13.481324487948,11.270773567308,13.4409876377907,12.412959178728,11.8529535614638,12.8370170362242,14.3181843540214,19.7818397080132,18.8797660800355,74.4096093988744,7.84171996865642,11.2038627214526,10.1187950573184,13.1859078902527,21.4647672179651,29.0273471030819,23.3033871335157,19.2940919862292,29.6526326243128,31.629005436018,38.7026585575244,41.188972851122,42.6858303730619,58.1247619810995,57.8932225636041,19.3990849674935,10.2325362356062,9.94086356296358,13.4098617762399,13.3773441524446,11.8929442783689,16.1869675802489,16.9766273636285,18.4433118604243,18.3815692408483,21.0480294627883,24.0879072632135,23.3124725518959,19.9615700842486,27.142431109069,35.3538694482161,26.555270743028,20.4193192265502,9.79358598925531,10.3146284201139,15.0820149746541,13.1284882146274,13.566853434899,7.02789739733949,9.69405289797595,14.3381278771531,8.91194696329577,11.889214293131,13.3587531552715,16.9508397588561,15.0209355619679,10.6036034419196,14.4778886912434,14.0671826897132,8.30723492703238,16.00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| ||
|EntrezGene=116891 | |||
|HGNC= | |||
|MCL_coexpression_id=200 | |||
|UniProt=Q8BNI4,Q5QNV1,Q5QNV2 | |||
|association_with_transcript=0bp_to_ENSMUST00000108523,ENSMUST00000140712,NM_033562,uc007jxi.1,uc007jxj.1_5end | |||
|description=CAGE_peak_1_at_Derl2_5end | |||
|id=chr11:70832735..70832769,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!6.55e-11!47;UBERON:0002100!7.87e-10!98;UBERON:0004119!3.12e-07!130;UBERON:0000925!3.12e-07!130;UBERON:0006595!3.12e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.15e-10,90;UBERON:0005256,1.62e-10,45;UBERON:0003104,5.65e-08,61;UBERON:0009142,5.65e-08,61;UBERON:0005177,3.79e-07,79 | |||
|phase1_expression=18.7374151112609,17.4487703819681,20.0199665331396,9.37639055051173,13.5241847085514,14.9412552001582,16.1192722010913,14.8491821957813,11.2630977721333,12.1713553687437,13.5262194898149,17.4701028199787,12.3264525550468,13.3753215701066,9.32707333083856,7.89653542820321,9.79386629379405,13.0916798623669,12.8887567589394,15.7024171165271,23.3869047915442,10.9220046320974,10.1867917764185,25.2788028013583,27.5291137280604,20.6723507081407,29.2918157388171,24.7791917588772,30.9738173713889,29.4875251819119,40.3549529392655,7.62036808151557,6.76571266343027,0,17.908800424579,23.7715542862644,18.783580776138,22.600708059793,30.4720784364282,37.6937095661135,31.1762688656438,17.7591826089196,33.9857247121808,31.0965140399676,27.0676406356104,39.0954582104382,60.244133514799,36.4102011155346,36.9072786993913,38.4971200167081,27.7173114818218,40.250718022192,14.4293041209653,7.97898356212479,12.0993767691287,34.4727644288169,38.1089475118546,31.9716697212014,14.1621522601718,10.5798195854407,16.4796164911607,38.6282766558811,46.2433293977792,67.4924787961049,56.3653826663175,70.3375313796639,44.0412162462055,76.8436610643109,11.0947885170071,12.4205463265155,10.3059231062177,17.9960120174396,11.9269012113871,10.1667363348412,13.2266750005166,11.9498442259303,9.91042928994498,13.0241084846891,11.6740965274745,14.1118327871307,19.6698433745181,6.25096044668112,14.7966989470732,12.9435400307286,18.488587980994,11.7851434189467,11.6744778255264,11.5567656411686,29.7603939799413,24.4851854745985,7.53647670624362,59.3692475117157,82.2765313786378,127.909656418163,141.651259003592,86.9172160968831,32.1617722101712,30.1661670963162,26.2383864648897,27.2071472372962,21.6898866456088,24.3820307087204,5.09610479413291,0,22.2985772241551,25.589346412985,24.7706978057244,37.7948641870088,19.6792791571851,21.3756680253348,13.7053408145247,14.9188084372949,20.7553947530453,25.4721262533932,16.9327738275415,26.6413173618912,23.2363269670311,14.1707369781513,15.9229899350977,11.1619126463712,8.83366073841574,10.1823803158397,11.1835056730873,7.61230072230023,8.79676168616511,19.9256503062701,12.8202183221335,9.59844369589452,17.4086211090099,9.8861822007183,9.15001205637253,9.04711335212624,6.95297280769106,6.39288643325826,8.51930982694196,7.94982189032012,9.67473956578005,13.8091737377203,25.0195530849338,18.0979996062368,11.1903580947925,9.19608417733892,9.18316862007281,14.1662528765572,9.79725587779121,11.4021211053516,11.2442069471675,11.6416516832557,7.76044774558232,8.13156144721623,10.381116325673,10.5213951565236,11.9560317167007,12.537077994798,12.3469281844766,11.7430217422911,15.4486901208912,10.808612098818,22.7330799516474,8.28503090142008,12.195355119017,10.2635375032778,7.57583153872673,10.8220327461072,12.4956361438776,10.2314935690179,9.92611585178591,10.6256461554124,9.87359099480883,14.2825693748813,11.4307021459657,16.5205985790626,16.2467085315377,17.312628020088,10.9350773253346,9.77593817603202,30.0681092515256,16.9248362664668,12.5840067815788,11.8440702648824,9.02072229254653,14.5212137728807,18.0126215514345,20.7345932462689,17.5575752771469,23.2225526160855,20.3581519128218,17.7071260116624,21.6410136702223,27.8634016682809,23.7751854862164,20.1132685986911,11.9490777600441,13.481324487948,11.270773567308,13.4409876377907,12.412959178728,11.8529535614638,12.8370170362242,14.3181843540214,19.7818397080132,18.8797660800355,74.4096093988744,7.84171996865642,11.2038627214526,10.1187950573184,13.1859078902527,21.4647672179651,29.0273471030819,23.3033871335157,19.2940919862292,29.6526326243128,31.629005436018,38.7026585575244,41.188972851122,42.6858303730619,58.1247619810995,57.8932225636041,19.3990849674935,10.2325362356062,9.94086356296358,13.4098617762399,13.3773441524446,11.8929442783689,16.1869675802489,16.9766273636285,18.4433118604243,18.3815692408483,21.0480294627883,24.0879072632135,23.3124725518959,19.9615700842486,27.142431109069,35.3538694482161,26.555270743028,20.4193192265502,9.79358598925531,10.3146284201139,15.0820149746541,13.1284882146274,13.566853434899,7.02789739733949,9.69405289797595,14.3381278771531,8.91194696329577,11.889214293131,13.3587531552715,16.9508397588561,15.0209355619679,10.6036034419196,14.4778886912434,14.0671826897132,8.30723492703238,16.0021019283359,25.2215762845929,14.3240575331439,21.1626489875326,26.9705264050934,20.6711325016541,22.1353306519628,20.9326917466259,22.1755574981278,19.250858432775,25.5989773928011,31.6255825724996,33.0033738394198,16.3411010761818,13.8647042404109,12.5477923269272,13.0745591369271,13.3005175231705,17.4801441250029,16.1258040190079,11.5696680663548,27.4565898434541,26.4790088579775,40.1361684460031,7.58476763530808,13.2400829890643,13.148217634338,9.54978752025092,10.0125948844487,16.6144076879015,9.82754100655701,11.619219894254,10.9385040020508,9.25972636848558,9.60679130723924,9.43190171275074,11.6676868335327,8.32894306969891,9.93655311497972,8.84479832348312,17.184071124272,8.69923982348122,12.4024874947378,17.92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| |||
|short_description=p1@Derl2 | |||
}} | |||
Revision as of 20:47, 12 September 2013
| Short description: | p1@Derl2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Derl2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:200 |
| Association with transcript: | 0bp_to_ENSMUST00000108523, ENSMUST00000140712, NM_033562, uc007jxi.1, uc007jxj.1_5end |
| EntrezGene: | Derl2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| trunk | 1.15e-10 | 90 |
| trunk mesenchyme | 1.62e-10 | 45 |
| mesenchyme | 5.65e-08 | 61 |
| entire embryonic mesenchyme | 5.65e-08 | 61 |
| trunk region element | 3.79e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
