FFCP PHASE1:Mm9::chr12:8011712..8011724,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=5|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:8011712..8011724,+|id=chr12:8011712..8011724,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!5.63e-21!22;UBERON:0007499!5.63e-21!22;UBERON:0006925!5.63e-21!22;UBERON:0009497!5.63e-21!22;UBERON:0000015!5.63e-21!22;UBERON:0002423!5.63e-21!22;UBERON:0006235!5.63e-21!22;UBERON:0008835!5.63e-21!22;UBERON:0003894!5.63e-21!22;UBERON:0004161!5.63e-21!22;UBERON:0008836!5.63e-21!22;UBERON:0009854!8.43e-20!23;UBERON:0009856!8.43e-20!23;UBERON:0002365!9.78e-18!25;UBERON:0002330!9.78e-18!25;UBERON:0004119!4.03e-13!130;UBERON:0000925!4.03e-13!130;UBERON:0006595!4.03e-13!130;UBERON:0001007!1.16e-12!128;UBERON:0001555!1.16e-12!128;UBERON:0007026!1.16e-12!128;UBERON:0004921!3.47e-11!126;UBERON:0004185!3.47e-11!126;UBERON:0000160!1.20e-10!43;UBERON:0003929!2.45e-08!55;UBERON:0005409!2.74e-08!59;UBERON:0003914!1.05e-07!47;UBERON:0005256!1.06e-07!47;UBERON:0000344!1.24e-07!15;UBERON:0005172!3.60e-07!49;UBERON:0005173!3.60e-07!49;UBERON:0002417!3.60e-07!49;UBERON:0000916!3.60e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.97e-18,22;UBERON:0007499,4.97e-18,22;UBERON:0006925,4.97e-18,22;UBERON:0009497,4.97e-18,22;UBERON:0000015,4.97e-18,22;UBERON:0002423,4.97e-18,22;UBERON:0006235,4.97e-18,22;UBERON:0008835,4.97e-18,22;UBERON:0003894,4.97e-18,22;UBERON:0004161,4.97e-18,22;UBERON:0008836,4.97e-18,22;UBERON:0009854,3.71e-17,23;UBERON:0009856,3.71e-17,23;UBERON:0002365,1.28e-15,25;UBERON:0002330,1.28e-15,25;UBERON:0001007,1.16e-14,116;UBERON:0001555,1.16e-14,116;UBERON:0007026,1.16e-14,116;UBERON:0004119,2.44e-14,118;UBERON:0000925,2.44e-14,118;UBERON:0006595,2.44e-14,118;UBERON:0000160,2.23e-13,31;UBERON:0004921,3.80e-12,114;UBERON:0005409,4.36e-08,47;UBERON:0001962,8.21e-08,2;UBERON:0001961,8.21e-08,2;UBERON:0001744,8.21e-08,2;UBERON:0005256,9.00e-08,45;UBERON:0003914,2.35e-07,47;UBERON:0003929,3.78e-07,55;UBERON:0005172,5.65e-07,49;UBERON:0005173,5.65e-07,49;UBERON:0002417,5.65e-07,49;UBERON:0000916,5.65e-07,49|phase1_expression=0,0.348975407639361,0.909998478779072,0,1.00179145989269,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,3.21172993494038,0.57423196411502,0.430761996159075,0.430942465371778,0.380046838912748,1.26015064879965,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,9.17495425784289,6.49776417447669,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0.230615497256059,0,0,0,3.21353458054686,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,0.793351699990633,0,0,0.257734922644187,0.201683524623343,0,0.380451252225118,3.79623249235609,1.81168850196412,2.5133520880027,0.795825888164603,1.75467678407208,3.59527763461689,2.37751854862164,1.7922714592893,0,0,0,0,0,0,0,0,0,0,3.26097889795864,0.166845105716094,0.196558995113203,0,0.405720242777006,0.482354319504834,0,0.287696137450811,1.94562272130042,5.21666685057355,74.7594673942244,2.23284568601102,3.74445207737473,3.53610429125956,1.79397413521912,2.8946611281802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0.347652977834566,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0,0,0|short_description=p@chr12:8011712..8011724,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=5 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:8011712..8011724,+ | |||
|id=chr12:8011712..8011724,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.63e-21!22;UBERON:0007499!5.63e-21!22;UBERON:0006925!5.63e-21!22;UBERON:0009497!5.63e-21!22;UBERON:0000015!5.63e-21!22;UBERON:0002423!5.63e-21!22;UBERON:0006235!5.63e-21!22;UBERON:0008835!5.63e-21!22;UBERON:0003894!5.63e-21!22;UBERON:0004161!5.63e-21!22;UBERON:0008836!5.63e-21!22;UBERON:0009854!8.43e-20!23;UBERON:0009856!8.43e-20!23;UBERON:0002365!9.78e-18!25;UBERON:0002330!9.78e-18!25;UBERON:0004119!4.03e-13!130;UBERON:0000925!4.03e-13!130;UBERON:0006595!4.03e-13!130;UBERON:0001007!1.16e-12!128;UBERON:0001555!1.16e-12!128;UBERON:0007026!1.16e-12!128;UBERON:0004921!3.47e-11!126;UBERON:0004185!3.47e-11!126;UBERON:0000160!1.20e-10!43;UBERON:0003929!2.45e-08!55;UBERON:0005409!2.74e-08!59;UBERON:0003914!1.05e-07!47;UBERON:0005256!1.06e-07!47;UBERON:0000344!1.24e-07!15;UBERON:0005172!3.60e-07!49;UBERON:0005173!3.60e-07!49;UBERON:0002417!3.60e-07!49;UBERON:0000916!3.60e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.97e-18,22;UBERON:0007499,4.97e-18,22;UBERON:0006925,4.97e-18,22;UBERON:0009497,4.97e-18,22;UBERON:0000015,4.97e-18,22;UBERON:0002423,4.97e-18,22;UBERON:0006235,4.97e-18,22;UBERON:0008835,4.97e-18,22;UBERON:0003894,4.97e-18,22;UBERON:0004161,4.97e-18,22;UBERON:0008836,4.97e-18,22;UBERON:0009854,3.71e-17,23;UBERON:0009856,3.71e-17,23;UBERON:0002365,1.28e-15,25;UBERON:0002330,1.28e-15,25;UBERON:0001007,1.16e-14,116;UBERON:0001555,1.16e-14,116;UBERON:0007026,1.16e-14,116;UBERON:0004119,2.44e-14,118;UBERON:0000925,2.44e-14,118;UBERON:0006595,2.44e-14,118;UBERON:0000160,2.23e-13,31;UBERON:0004921,3.80e-12,114;UBERON:0005409,4.36e-08,47;UBERON:0001962,8.21e-08,2;UBERON:0001961,8.21e-08,2;UBERON:0001744,8.21e-08,2;UBERON:0005256,9.00e-08,45;UBERON:0003914,2.35e-07,47;UBERON:0003929,3.78e-07,55;UBERON:0005172,5.65e-07,49;UBERON:0005173,5.65e-07,49;UBERON:0002417,5.65e-07,49;UBERON:0000916,5.65e-07,49 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,0,1.00179145989269,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,3.21172993494038,0.57423196411502,0.430761996159075,0.430942465371778,0.380046838912748,1.26015064879965,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,9.17495425784289,6.49776417447669,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0.230615497256059,0,0,0,3.21353458054686,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,0.793351699990633,0,0,0.257734922644187,0.201683524623343,0,0.380451252225118,3.79623249235609,1.81168850196412,2.5133520880027,0.795825888164603,1.75467678407208,3.59527763461689,2.37751854862164,1.7922714592893,0,0,0,0,0,0,0,0,0,0,3.26097889795864,0.166845105716094,0.196558995113203,0,0.405720242777006,0.482354319504834,0,0.287696137450811,1.94562272130042,5.21666685057355,74.7594673942244,2.23284568601102,3.74445207737473,3.53610429125956,1.79397413521912,2.8946611281802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0.347652977834566,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr12:8011712..8011724,+ | |||
}} |
Revision as of 23:18, 12 September 2013
Short description: | p@chr12:8011712..8011724, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:8011712..8011724, + |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 4.97e-18 | 22 |
epithelial sac | 4.97e-18 | 22 |
digestive gland | 4.97e-18 | 22 |
epithelium of foregut-midgut junction | 4.97e-18 | 22 |
anatomical boundary | 4.97e-18 | 22 |
hepatobiliary system | 4.97e-18 | 22 |
foregut-midgut junction | 4.97e-18 | 22 |
hepatic diverticulum | 4.97e-18 | 22 |
liver primordium | 4.97e-18 | 22 |
septum transversum | 4.97e-18 | 22 |
liver bud | 4.97e-18 | 22 |
digestive tract diverticulum | 3.71e-17 | 23 |
sac | 3.71e-17 | 23 |
exocrine gland | 1.28e-15 | 25 |
exocrine system | 1.28e-15 | 25 |
digestive system | 1.16e-14 | 116 |
digestive tract | 1.16e-14 | 116 |
primitive gut | 1.16e-14 | 116 |
endoderm-derived structure | 2.44e-14 | 118 |
endoderm | 2.44e-14 | 118 |
presumptive endoderm | 2.44e-14 | 118 |
intestine | 2.23e-13 | 31 |
subdivision of digestive tract | 3.80e-12 | 114 |
gastrointestinal system | 4.36e-08 | 47 |
gut-associated lymphoid tissue | 8.21e-08 | 2 |
mucosa-associated lymphoid tissue | 8.21e-08 | 2 |
lymphoid tissue | 8.21e-08 | 2 |
trunk mesenchyme | 9.00e-08 | 45 |
epithelial tube | 2.35e-07 | 47 |
gut epithelium | 3.78e-07 | 55 |
abdomen element | 5.65e-07 | 49 |
abdominal segment element | 5.65e-07 | 49 |
abdominal segment of trunk | 5.65e-07 | 49 |
abdomen | 5.65e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.