FFCP PHASE1:Mm9::chr12:80190685..80190706,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=110417|HGNC=|UniProt=Q5M9N4,Q8BMJ9|association_with_transcript=-28bp_to_ENSMUST00000072154,NM_029988,uc007nzs.1,uc007nzt.1_5end|description=CAGE_peak_3_at_Pigh_5end|id=chr12:80190685..80190706,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.19e-10!51;UBERON:0005409!6.81e-08!59|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.63e-11,47;UBERON:0007023,3.91e-11,51;UBERON:0000160,5.25e-10,31;UBERON:0003102,8.71e-07,22|phase1_expression=1.28119077683835,0.348975407639361,1.81999695755814,0.30246421130683,2.50447864973174,1.00727563147134,0.700837921786577,0.258246646883153,0,0,0.171217968225505,0.159544317990673,0,0.437102012094987,0.999329285446988,0.607425802169478,0,0.630924330716475,0.822686601634433,0,1.02051948181284,0.297872853602656,0.261199789138935,2.23989391910769,1.83527424853736,0.57423196411502,1.29228598847722,1.07735616342945,2.85035129184561,2.52030129759931,1.77384408524244,0,0.61506478758457,0,0.288851619751275,2.32728503501889,2.24586291888606,0,0,0,0,0,0,0.755380907853464,1.92616169317078,0.917733760808408,0,0.218025156380447,0.659058548203415,0.388859798148567,0.419959264876088,0,0,0,0,1.02903774414379,0.573066879877513,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.768436610643109,0.414758449233911,0.270011876663381,0.841299845405528,0.285650984403804,0.220868540951614,0,0.383381884072945,0,0,1.27687338085188,0.921639199537461,0.131886287730194,0.274462930807229,0.52091337055676,1.3959149950069,1.12552522006336,0.61119299110724,0,0.142371680799103,0.372798891650601,0.832988126665025,1.058001841495,0.869593466105033,1.72084775396277,0,0.539703191637817,0.649776417447669,0,1.96622188184453,1.70430322578058,0.779358013808606,1.7666978725517,0.704217098883403,0,0,0,1.5154372870785,1.01343946190039,1.01104889002957,1.37020655662872,0.258937883647172,1.63286352971307,0.346970653532272,0.913396434936424,0.691846491768175,1.05505848386836,1.29347577849275,1.75933227861546,4.94389935468748,1.73519228303894,0.884610551949874,1.29413479957927,2.20841518460394,1.45462575940567,5.59175283654366,0.878342391034642,0.628340120440365,2.04365644166873,0.11981512450592,0.599902730993408,0.254140454146129,0.898743836428936,0.457500602818626,0.125654352112864,0.869121600961382,1.02286182932132,1.0389402227978,1.29793010454206,0.916554274652847,1.99051152976149,2.77995034277042,6.31325567659422,0.780722657776222,0.459804208866946,0.720248519221397,0.90422890701429,0.95251098811859,0.2562274405697,0.843315521037559,2.32833033665114,0.431135985865684,0.567318240503458,0.351902248327898,1.09597866213787,1.94633074457919,2.78601733217733,1.64625709126355,0.199034266818493,0,0.772043721344145,0.284163499395593,0.828503090142008,0.469052119962192,0.36012412292203,0.23674473558521,0.590292695242212,0.308534225774757,0.697601834251224,1.07309360559848,0.350296027101508,1.15191894939436,0.820837320395476,0.729619285912702,0.730999937126662,0.658650345873152,0.805238512562231,0.630869845692382,0.617427674275707,5.28670052774077,2.64450566663544,0.426576501070468,0.464473343720877,1.41754207454303,1.00841762311671,2.66853652613844,3.42406127002606,1.89811624617805,2.47048432086016,3.01602250560323,2.98434708061726,2.33956904542944,3.59527763461689,2.59365659849633,1.39398891278057,0.379335801906163,0.799739588268102,4.50830942692322,0.407302655690628,0.969762435838129,0.701358198903186,1.3279672796094,1.62371162777562,2.04098346193787,0.987177311374404,0.296452627087149,0.83422552858047,0.196558995113203,0.224862112384854,0.608580364165509,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,1.11642284300551,1.24815069245824,1.26289438973556,0.896987067609561,1.4473305640901,1.66277871149944,0.757965647081939,0.162964976442026,0.339490171550376,0.234690248288502,1.84256883185997,0.714130922658041,0.780534591431195,0.630540576424764,0.44292937929755,0.956728611944923,0.983179888294428,1.89953480052485,1.01254341007058,1.50791283939272,1.63171705145613,2.45882136509518,3.58717770196152,1.60550589987792,1.17211686592203,0.819674726883377,0.504941854408746,0.94652465824877,0.780877488593277,0.215423397732799,0.955875191810208,1.33679204449436,0,0.809621403349789,0.584511715822624,0.790575555893047,0.642642632843614,1.27746076687442,1.06839362200353,0.977321756121456,2.63952196756057,0,0.485561272309963,0.906970670894253,0.565815239267694,0.590603785761546,1.84461088766356,1.80899805217755,0.363533729477506,0.712994756769443,1.58018378967908,3.16255825724996,0,2.04263763452273,0.36012218806262,0.646793418913773,0.428674070063185,1.41872186913819,1.24858172321449,0.987294123612726,0.608929898229199,1.17335854031855,2.1183207086382,3.52845436887939,3.13283880588812,1.93757312035087,2.47282992205439,1.90995750405018,3.61109979439135,3.20628920292836,1.8542530201051,0.512612642393558,1.03193433981611,0.925972636848558,0.9418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| ||
|EntrezGene=110417 | |||
|HGNC= | |||
|UniProt=Q5M9N4,Q8BMJ9 | |||
|association_with_transcript=-28bp_to_ENSMUST00000072154,NM_029988,uc007nzs.1,uc007nzt.1_5end | |||
|description=CAGE_peak_3_at_Pigh_5end | |||
|id=chr12:80190685..80190706,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.19e-10!51;UBERON:0005409!6.81e-08!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.63e-11,47;UBERON:0007023,3.91e-11,51;UBERON:0000160,5.25e-10,31;UBERON:0003102,8.71e-07,22 | |||
|phase1_expression=1.28119077683835,0.348975407639361,1.81999695755814,0.30246421130683,2.50447864973174,1.00727563147134,0.700837921786577,0.258246646883153,0,0,0.171217968225505,0.159544317990673,0,0.437102012094987,0.999329285446988,0.607425802169478,0,0.630924330716475,0.822686601634433,0,1.02051948181284,0.297872853602656,0.261199789138935,2.23989391910769,1.83527424853736,0.57423196411502,1.29228598847722,1.07735616342945,2.85035129184561,2.52030129759931,1.77384408524244,0,0.61506478758457,0,0.288851619751275,2.32728503501889,2.24586291888606,0,0,0,0,0,0,0.755380907853464,1.92616169317078,0.917733760808408,0,0.218025156380447,0.659058548203415,0.388859798148567,0.419959264876088,0,0,0,0,1.02903774414379,0.573066879877513,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.768436610643109,0.414758449233911,0.270011876663381,0.841299845405528,0.285650984403804,0.220868540951614,0,0.383381884072945,0,0,1.27687338085188,0.921639199537461,0.131886287730194,0.274462930807229,0.52091337055676,1.3959149950069,1.12552522006336,0.61119299110724,0,0.142371680799103,0.372798891650601,0.832988126665025,1.058001841495,0.869593466105033,1.72084775396277,0,0.539703191637817,0.649776417447669,0,1.96622188184453,1.70430322578058,0.779358013808606,1.7666978725517,0.704217098883403,0,0,0,1.5154372870785,1.01343946190039,1.01104889002957,1.37020655662872,0.258937883647172,1.63286352971307,0.346970653532272,0.913396434936424,0.691846491768175,1.05505848386836,1.29347577849275,1.75933227861546,4.94389935468748,1.73519228303894,0.884610551949874,1.29413479957927,2.20841518460394,1.45462575940567,5.59175283654366,0.878342391034642,0.628340120440365,2.04365644166873,0.11981512450592,0.599902730993408,0.254140454146129,0.898743836428936,0.457500602818626,0.125654352112864,0.869121600961382,1.02286182932132,1.0389402227978,1.29793010454206,0.916554274652847,1.99051152976149,2.77995034277042,6.31325567659422,0.780722657776222,0.459804208866946,0.720248519221397,0.90422890701429,0.95251098811859,0.2562274405697,0.843315521037559,2.32833033665114,0.431135985865684,0.567318240503458,0.351902248327898,1.09597866213787,1.94633074457919,2.78601733217733,1.64625709126355,0.199034266818493,0,0.772043721344145,0.284163499395593,0.828503090142008,0.469052119962192,0.36012412292203,0.23674473558521,0.590292695242212,0.308534225774757,0.697601834251224,1.07309360559848,0.350296027101508,1.15191894939436,0.820837320395476,0.729619285912702,0.730999937126662,0.658650345873152,0.805238512562231,0.630869845692382,0.617427674275707,5.28670052774077,2.64450566663544,0.426576501070468,0.464473343720877,1.41754207454303,1.00841762311671,2.66853652613844,3.42406127002606,1.89811624617805,2.47048432086016,3.01602250560323,2.98434708061726,2.33956904542944,3.59527763461689,2.59365659849633,1.39398891278057,0.379335801906163,0.799739588268102,4.50830942692322,0.407302655690628,0.969762435838129,0.701358198903186,1.3279672796094,1.62371162777562,2.04098346193787,0.987177311374404,0.296452627087149,0.83422552858047,0.196558995113203,0.224862112384854,0.608580364165509,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,1.11642284300551,1.24815069245824,1.26289438973556,0.896987067609561,1.4473305640901,1.66277871149944,0.757965647081939,0.162964976442026,0.339490171550376,0.234690248288502,1.84256883185997,0.714130922658041,0.780534591431195,0.630540576424764,0.44292937929755,0.956728611944923,0.983179888294428,1.89953480052485,1.01254341007058,1.50791283939272,1.63171705145613,2.45882136509518,3.58717770196152,1.60550589987792,1.17211686592203,0.819674726883377,0.504941854408746,0.94652465824877,0.780877488593277,0.215423397732799,0.955875191810208,1.33679204449436,0,0.809621403349789,0.584511715822624,0.790575555893047,0.642642632843614,1.27746076687442,1.06839362200353,0.977321756121456,2.63952196756057,0,0.485561272309963,0.906970670894253,0.565815239267694,0.590603785761546,1.84461088766356,1.80899805217755,0.363533729477506,0.712994756769443,1.58018378967908,3.16255825724996,0,2.04263763452273,0.36012218806262,0.646793418913773,0.428674070063185,1.41872186913819,1.24858172321449,0.987294123612726,0.608929898229199,1.17335854031855,2.1183207086382,3.52845436887939,3.13283880588812,1.93757312035087,2.47282992205439,1.90995750405018,3.61109979439135,3.20628920292836,1.8542530201051,0.512612642393558,1.03193433981611,0.925972636848558,0.941842285023455,0.546776910884101,0.457556346413045,0.169978429993855,0.419854356970974,0.414599921413271,5.72802370809068,0,1.01659733563424,1.94409613479242,2.50905955217362,1.9652630737156,2.69728692769641,1.98368293740806,4.4498510137285,2.85152941241944,3.72803587852155,0,0.299033092087958,0.66183396182839,0.583353565032143,0.258319646955462,0.506868376472335,0.821500670520278,1.0416350787516,0.838874755405687,0.241584120826006,0.288030006257865,0.316011120628178,0.608175645870493,0.616265742988964,0.51968329191118,0,0,0.480781798079875,0.147689527174577,0.504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| |||
|short_description=p3@Pigh | |||
}} | |||
Revision as of 23:19, 12 September 2013
| Short description: | p3@Pigh |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Pigh_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -28bp_to_ENSMUST00000072154, NM_029988, uc007nzs.1, uc007nzt.1_5end |
| EntrezGene: | Pigh |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system | 2.63e-11 | 47 |
| adult organism | 3.91e-11 | 51 |
| intestine | 5.25e-10 | 31 |
| surface structure | 8.71e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
