FFCP PHASE1:Hg19::chr3:193096600..193096609,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=344905|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=31789|TSSclassifier=S|UniProt=C9JPQ4|association_with_transcript=0bp_to_ENST00000446087_5end|coexpression_cluster_id=C37|description=CAGE_peak_2_at_ATP13A5_5end|id=chr3:193096600..193096609,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0001014;1.07e-17;2!CL:0001016;1.07e-17;2!CL:0000453;7.01e-08;5!CL:0000840;8.97e-07;5|ontology_enrichment_celltype_v019_2=CL:0001014,1.07e-17,2;CL:0001016,1.07e-17,2;CL:0000453,7.01e-08,5;CL:0000840,8.97e-07,5;CL:0001029,8.97e-07,5|ontology_enrichment_development_v019=UBERON:0006298;2.58e-34;1!UBERON:0008801;7.06e-34;1!UBERON:0006601;1.01e-07;82|ontology_enrichment_disease=DOID:178!1.18e-08!1;DOID:326!1.18e-08!1;DOID:3978!1.18e-08!1;DOID:3394!1.18e-08!1;DOID:5844!1.18e-08!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001896!2.81e-22!3;UBERON:0005290!2.81e-22!3;UBERON:0010096!2.81e-22!3;UBERON:0007023!6.88e-19!115;UBERON:0001829!4.13e-16!2;UBERON:0003408!4.25e-12!10;UBERON:0000166!4.35e-12!21;UBERON:0001044!6.09e-12!6;UBERON:0003293!6.09e-12!6;UBERON:0003294!6.09e-12!6;UBERON:0010047!6.09e-12!6;UBERON:0000167!6.09e-12!6;UBERON:0006562!1.52e-10!11;UBERON:0000078!3.80e-10!18;UBERON:0000153!1.86e-09!129;UBERON:0007811!1.86e-09!129;UBERON:0000161!2.36e-09!35;UBERON:0001736!6.03e-09!1;UBERON:0006298!6.03e-09!1;UBERON:0000165!6.22e-09!28;UBERON:0000930!6.22e-09!28;UBERON:0001831!7.01e-09!1;UBERON:0001567!7.01e-09!1;UBERON:0008801!7.01e-09!1;UBERON:0007029!8.15e-09!1;UBERON:0002298!1.09e-08!8;UBERON:0002336!1.10e-08!1;UBERON:0001018!1.10e-08!1;UBERON:0002473!1.10e-08!1;UBERON:0005340!1.10e-08!1;UBERON:0002316!1.10e-08!1;UBERON:0003544!1.10e-08!1;UBERON:0001020!1.10e-08!1;UBERON:0005970!1.10e-08!1;UBERON:0002437!1.10e-08!1;UBERON:0002372!1.59e-08!1;UBERON:0001961!1.59e-08!1;UBERON:0001744!1.59e-08!1;UBERON:0001735!1.59e-08!1;UBERON:0006834!2.64e-08!1;UBERON:0004121!1.18e-07!169;UBERON:0000924!2.06e-07!173;UBERON:0006601!2.06e-07!173;UBERON:0000033!2.55e-07!123;UBERON:0001042!5.72e-07!10;UBERON:0009145!5.72e-07!10;UBERON:0000974!7.33e-07!10|ontology_enrichment_uberon_v019=UBERON:0001829;2.84e-66;2!UBERON:0001044;5.37e-50;6!UBERON:0003293;5.37e-50;6!UBERON:0003294;5.37e-50;6!UBERON:0010047;5.37e-50;6!UBERON:0003408;5.37e-50;6!UBERON:0000167;5.37e-50;6!UBERON:0001736;2.58e-34;1!UBERON:0007029;7.06e-34;1!UBERON:0001831;7.06e-34;1!UBERON:0001567;7.06e-34;1!UBERON:0001041;5.39e-22;14!UBERON:0004089;1.07e-17;2!UBERON:0000161;1.94e-16;19!UBERON:0000166;1.94e-16;19!UBERON:0001896;2.31e-12;3!UBERON:0005290;2.31e-12;3!UBERON:0000165;2.06e-11;28!UBERON:0002365;3.62e-10;31!UBERON:0002330;3.62e-10;31!UBERON:0000014;1.57e-09;4!UBERON:0004921;1.43e-08;33!UBERON:0002298;8.02e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.03e-66,2;UBERON:0001044,4.55e-50,6;UBERON:0003293,4.55e-50,6;UBERON:0003294,4.55e-50,6;UBERON:0010047,4.55e-50,6;UBERON:0000167,4.55e-50,6;UBERON:0001736,2.58e-34,1;UBERON:0006298,2.58e-34,1;UBERON:0001831,5.05e-34,1;UBERON:0001567,5.05e-34,1;UBERON:0008801,5.05e-34,1;UBERON:0007029,9.85e-34,1;UBERON:0003408,1.86e-30,10;UBERON:0004089,9.07e-18,2;UBERON:0000166,2.49e-14,22;UBERON:0001896,2.31e-12,3;UBERON:0005290,2.31e-12,3;UBERON:0010096,2.31e-12,3;UBERON:0000165,4.64e-11,29;UBERON:0000930,4.64e-11,29;UBERON:0002365,2.15e-10,31;UBERON:0002330,2.15e-10,31;UBERON:0000014,1.70e-09,4;UBERON:0000161,4.73e-09,36;UBERON:0001444,7.91e-07,49;UBERON:0002298,8.02e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,1.5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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=344905 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31789 | |||
|TSSclassifier=S | |||
|UniProt=C9JPQ4 | |||
|association_with_transcript=0bp_to_ENST00000446087_5end | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_2_at_ATP13A5_5end | |||
|id=chr3:193096600..193096609,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.07e-17;2!CL:0001016;1.07e-17;2!CL:0000453;7.01e-08;5!CL:0000840;8.97e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.07e-17,2;CL:0001016,1.07e-17,2;CL:0000453,7.01e-08,5;CL:0000840,8.97e-07,5;CL:0001029,8.97e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.58e-34;1!UBERON:0008801;7.06e-34;1!UBERON:0006601;1.01e-07;82 | |||
|ontology_enrichment_disease=DOID:178!1.18e-08!1;DOID:326!1.18e-08!1;DOID:3978!1.18e-08!1;DOID:3394!1.18e-08!1;DOID:5844!1.18e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!2.81e-22!3;UBERON:0005290!2.81e-22!3;UBERON:0010096!2.81e-22!3;UBERON:0007023!6.88e-19!115;UBERON:0001829!4.13e-16!2;UBERON:0003408!4.25e-12!10;UBERON:0000166!4.35e-12!21;UBERON:0001044!6.09e-12!6;UBERON:0003293!6.09e-12!6;UBERON:0003294!6.09e-12!6;UBERON:0010047!6.09e-12!6;UBERON:0000167!6.09e-12!6;UBERON:0006562!1.52e-10!11;UBERON:0000078!3.80e-10!18;UBERON:0000153!1.86e-09!129;UBERON:0007811!1.86e-09!129;UBERON:0000161!2.36e-09!35;UBERON:0001736!6.03e-09!1;UBERON:0006298!6.03e-09!1;UBERON:0000165!6.22e-09!28;UBERON:0000930!6.22e-09!28;UBERON:0001831!7.01e-09!1;UBERON:0001567!7.01e-09!1;UBERON:0008801!7.01e-09!1;UBERON:0007029!8.15e-09!1;UBERON:0002298!1.09e-08!8;UBERON:0002336!1.10e-08!1;UBERON:0001018!1.10e-08!1;UBERON:0002473!1.10e-08!1;UBERON:0005340!1.10e-08!1;UBERON:0002316!1.10e-08!1;UBERON:0003544!1.10e-08!1;UBERON:0001020!1.10e-08!1;UBERON:0005970!1.10e-08!1;UBERON:0002437!1.10e-08!1;UBERON:0002372!1.59e-08!1;UBERON:0001961!1.59e-08!1;UBERON:0001744!1.59e-08!1;UBERON:0001735!1.59e-08!1;UBERON:0006834!2.64e-08!1;UBERON:0004121!1.18e-07!169;UBERON:0000924!2.06e-07!173;UBERON:0006601!2.06e-07!173;UBERON:0000033!2.55e-07!123;UBERON:0001042!5.72e-07!10;UBERON:0009145!5.72e-07!10;UBERON:0000974!7.33e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.84e-66;2!UBERON:0001044;5.37e-50;6!UBERON:0003293;5.37e-50;6!UBERON:0003294;5.37e-50;6!UBERON:0010047;5.37e-50;6!UBERON:0003408;5.37e-50;6!UBERON:0000167;5.37e-50;6!UBERON:0001736;2.58e-34;1!UBERON:0007029;7.06e-34;1!UBERON:0001831;7.06e-34;1!UBERON:0001567;7.06e-34;1!UBERON:0001041;5.39e-22;14!UBERON:0004089;1.07e-17;2!UBERON:0000161;1.94e-16;19!UBERON:0000166;1.94e-16;19!UBERON:0001896;2.31e-12;3!UBERON:0005290;2.31e-12;3!UBERON:0000165;2.06e-11;28!UBERON:0002365;3.62e-10;31!UBERON:0002330;3.62e-10;31!UBERON:0000014;1.57e-09;4!UBERON:0004921;1.43e-08;33!UBERON:0002298;8.02e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.03e-66,2;UBERON:0001044,4.55e-50,6;UBERON:0003293,4.55e-50,6;UBERON:0003294,4.55e-50,6;UBERON:0010047,4.55e-50,6;UBERON:0000167,4.55e-50,6;UBERON:0001736,2.58e-34,1;UBERON:0006298,2.58e-34,1;UBERON:0001831,5.05e-34,1;UBERON:0001567,5.05e-34,1;UBERON:0008801,5.05e-34,1;UBERON:0007029,9.85e-34,1;UBERON:0003408,1.86e-30,10;UBERON:0004089,9.07e-18,2;UBERON:0000166,2.49e-14,22;UBERON:0001896,2.31e-12,3;UBERON:0005290,2.31e-12,3;UBERON:0010096,2.31e-12,3;UBERON:0000165,4.64e-11,29;UBERON:0000930,4.64e-11,29;UBERON:0002365,2.15e-10,31;UBERON:0002330,2.15e-10,31;UBERON:0000014,1.70e-09,4;UBERON:0000161,4.73e-09,36;UBERON:0001444,7.91e-07,49;UBERON:0002298,8.02e-07,6 | |||
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|short_description=p2@ATP13A5 | |||
}} |
Revision as of 23:24, 12 September 2013
Short description: | p2@ATP13A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ATP13A5_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_ENST00000446087_5end |
EntrezGene: | ATP13A5 |
HGNC: | 31789 |
UniProt: | C9JPQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.07e-17 | 2 |
immature CD1a-positive Langerhans cell | 1.07e-17 | 2 |
Langerhans cell | 7.01e-08 | 5 |
immature conventional dendritic cell | 8.97e-07 | 5 |
common dendritic progenitor | 8.97e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.03e-66 | 2 |
saliva-secreting gland | 4.55e-50 | 6 |
gland of oral region | 4.55e-50 | 6 |
gland of foregut | 4.55e-50 | 6 |
oral gland | 4.55e-50 | 6 |
oral cavity | 4.55e-50 | 6 |
submandibular gland | 2.58e-34 | 1 |
submandibular gland primordium | 2.58e-34 | 1 |
parotid gland | 5.05e-34 | 1 |
cheek | 5.05e-34 | 1 |
parotid gland primordium | 5.05e-34 | 1 |
surface | 9.85e-34 | 1 |
gland of gut | 1.86e-30 | 10 |
midface | 9.07e-18 | 2 |
oral opening | 2.49e-14 | 22 |
medulla oblongata | 2.31e-12 | 3 |
myelencephalon | 2.31e-12 | 3 |
future myelencephalon | 2.31e-12 | 3 |
mouth | 4.64e-11 | 29 |
stomodeum | 4.64e-11 | 29 |
exocrine gland | 2.15e-10 | 31 |
exocrine system | 2.15e-10 | 31 |
zone of skin | 1.70e-09 | 4 |
orifice | 4.73e-09 | 36 |
subdivision of head | 7.91e-07 | 49 |
brainstem | 8.02e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.