FFCP PHASE1:Mm9::chr13:74258853..74258869,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=105243|HGNC=|MCL_coexpression_id=24|UniProt=G3X939|association_with_transcript=-93bp_to_ENSMUST00000036208,NM_001081060,uc007res.1_5end|description=CAGE_peak_1_at_Slc9a3_5end|id=chr13:74258853..74258869,+|ontology_enrichment_celltype=CL:0002563!8.11e-07!9;CL:0002251!8.11e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.68e-08,9;CL:0002251,1.68e-08,9;CL:0000075,6.26e-08,7;CL:0000239,3.06e-07,6;CL:0000677,3.06e-07,6;CL:0000584,3.06e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.06e-10!15;UBERON:0000160!5.68e-10!43;UBERON:0005409!1.02e-09!59;UBERON:0001242!2.04e-09!13;UBERON:0000060!2.04e-09!13;UBERON:0001262!2.04e-09!13;UBERON:0004786!2.04e-09!13;UBERON:0000485!2.35e-07!11;UBERON:0003350!8.11e-07!9;UBERON:0004808!8.11e-07!9;UBERON:0001277!8.11e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.63e-24,31;UBERON:0005409,4.55e-21,47;UBERON:0000344,1.29e-13,15;UBERON:0001242,6.35e-12,13;UBERON:0001262,6.35e-12,13;UBERON:0004786,6.35e-12,13;UBERON:0004923,1.87e-09,24;UBERON:0003350,1.68e-08,9;UBERON:0004808,1.68e-08,9;UBERON:0001277,1.68e-08,9;UBERON:0000485,4.44e-08,11|phase1_expression=0.80074423552397,505.316390261795,465.009222656106,908.602490765717,624.616975243095,27.7000798654618,42.0502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7945671233864,0,0,54.8774010181385,61.9405058881359,216.485450471363,192.981374279266,109.674857437118,28.8835597573688,70.0643760732607,34.8116901728828,0,0,0,2.3108129580102,4.82080471539628,3.47087905646027,0,0,0,0,0,0,0,0,0,0,3.05235218932625,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99955689082663,3.09215957332259,0,0,0,1.10115880999389,0,0.307213066512487,0,0,0,0.558365998002762,1.12552522006336,0.30559649555362,1.17851434189467,1.85083185038834,0.186399445825301,1.4387976733305,0,0,0,0,0,0,0,16.431997155415,0,0,0,19.4363919291819,0,0,0,0,0,0,46.0161035267812,0,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0.753999547978053,17.7980376768749,0,0,0.970601099684455,0.441683036920787,0,121.154644791779,7.90508151931177,9.21565509979202,147.909634965774,0,0,0,0,0,0,0.173824320192276,0,0.20778804455956,0,0,0.746441823660558,0.758168275301024,0,0,0,0,0,0.136072998302656,0.2562274405697,0.374806898238915,1.03481348295606,0,0,0,0,0,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.583826711835847,0.493679549740441,0.32833492815819,2.26992666728396,0.146199987425332,0.658650345873152,0.134206418760372,0.420579897128254,0,801.26554873571,328.447603796122,0,0,1.67527699718721,17.9498336914775,29.3539017875229,46.0346015192393,102.972806355159,71.3146473954967,106.063458113714,113.007276119374,130.82090245693,148.305202427947,160.374433007023,179.625428475439,0.189667900953082,1.48523066392647,6.76246414038483,9.9789150644204,16.4859614092482,22.3031907251213,44.0126298384831,112.626542908436,98.438202356542,87.3651920566348,0.592905254174298,0,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,1.01031551178845,0.717589654087649,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,1.47476983244164,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0.504941854408746,0.315508219416257,0.390438744296638,0,0,0,0,0,0,0,0.642642632843614,0.99358059645788,0,0,0,0,0,0,0,0,0,30.2361103006819,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,1.69465656691056,1.54369878638473,6.43056386471772,0.161464426695906,0.784068024066026,1.19372344003136,3.44695889464629,139.910801582328,0.741701208042039,0,0,0,0,0,0,0,0,0,8.59203556213602,0,0.813277868507395,1.08005340821801,1.46361807210128,8.7345025498471,4.31565908431426,5.20716771069616,4.4498510137285,37.9771871744953,30.4456263412594,0,0.747582730219894,0.66183396182839,0.194451188344048,0.258319646955462,0.506868376472335,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,14.5107445513735,0,0,0,0,0,0,9.00347192132076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919217542250071,1.55572709461131,2.88449080134452,1.28367683836726,1.26348605881899,4.05566879824384,2.07488975524684,2.80924522409647,3.07320731543373,2.41228969613576,3.81034953026459,2.0859178670074,1.92909220463705,1.64834360321323,2.35518272215036,4.11443102862498,3.01708870470874,2.86123427936785,3.92435324907287,2.82328141245992,1.77690676572521,2.56099162021882,3.15683653725411,3.12349461845482,5.05028044491965,2.96587545310435,1.97008964751127,0.818462086339379,2.78886314134739,1.73615949883027,0,3.04111090979031,7.30561583764214,1.14772999241306,1.76473135295612,0.695603506861264|short_description=p1@Slc9a3}} | ||
|EntrezGene=105243 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=G3X939 | |||
|association_with_transcript=-93bp_to_ENSMUST00000036208,NM_001081060,uc007res.1_5end | |||
|description=CAGE_peak_1_at_Slc9a3_5end | |||
|id=chr13:74258853..74258869,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.11e-07!9;CL:0002251!8.11e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.68e-08,9;CL:0002251,1.68e-08,9;CL:0000075,6.26e-08,7;CL:0000239,3.06e-07,6;CL:0000677,3.06e-07,6;CL:0000584,3.06e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.06e-10!15;UBERON:0000160!5.68e-10!43;UBERON:0005409!1.02e-09!59;UBERON:0001242!2.04e-09!13;UBERON:0000060!2.04e-09!13;UBERON:0001262!2.04e-09!13;UBERON:0004786!2.04e-09!13;UBERON:0000485!2.35e-07!11;UBERON:0003350!8.11e-07!9;UBERON:0004808!8.11e-07!9;UBERON:0001277!8.11e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.63e-24,31;UBERON:0005409,4.55e-21,47;UBERON:0000344,1.29e-13,15;UBERON:0001242,6.35e-12,13;UBERON:0001262,6.35e-12,13;UBERON:0004786,6.35e-12,13;UBERON:0004923,1.87e-09,24;UBERON:0003350,1.68e-08,9;UBERON:0004808,1.68e-08,9;UBERON:0001277,1.68e-08,9;UBERON:0000485,4.44e-08,11 | |||
|phase1_expression=0.80074423552397,505.316390261795,465.009222656106,908.602490765717,624.616975243095,27.7000798654618,42.0502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7945671233864,0,0,54.8774010181385,61.9405058881359,216.485450471363,192.981374279266,109.674857437118,28.8835597573688,70.0643760732607,34.8116901728828,0,0,0,2.3108129580102,4.82080471539628,3.47087905646027,0,0,0,0,0,0,0,0,0,0,3.05235218932625,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99955689082663,3.09215957332259,0,0,0,1.10115880999389,0,0.307213066512487,0,0,0,0.558365998002762,1.12552522006336,0.30559649555362,1.17851434189467,1.85083185038834,0.186399445825301,1.4387976733305,0,0,0,0,0,0,0,16.431997155415,0,0,0,19.4363919291819,0,0,0,0,0,0,46.0161035267812,0,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0.753999547978053,17.7980376768749,0,0,0.970601099684455,0.441683036920787,0,121.154644791779,7.90508151931177,9.21565509979202,147.909634965774,0,0,0,0,0,0,0.173824320192276,0,0.20778804455956,0,0,0.746441823660558,0.758168275301024,0,0,0,0,0,0.136072998302656,0.2562274405697,0.374806898238915,1.03481348295606,0,0,0,0,0,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.583826711835847,0.493679549740441,0.32833492815819,2.26992666728396,0.146199987425332,0.658650345873152,0.134206418760372,0.420579897128254,0,801.26554873571,328.447603796122,0,0,1.67527699718721,17.9498336914775,29.3539017875229,46.0346015192393,102.972806355159,71.3146473954967,106.063458113714,113.007276119374,130.82090245693,148.305202427947,160.374433007023,179.625428475439,0.189667900953082,1.48523066392647,6.76246414038483,9.9789150644204,16.4859614092482,22.3031907251213,44.0126298384831,112.626542908436,98.438202356542,87.3651920566348,0.592905254174298,0,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,1.01031551178845,0.717589654087649,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,1.47476983244164,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0.504941854408746,0.315508219416257,0.390438744296638,0,0,0,0,0,0,0,0.642642632843614,0.99358059645788,0,0,0,0,0,0,0,0,0,30.2361103006819,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,1.69465656691056,1.54369878638473,6.43056386471772,0.161464426695906,0.784068024066026,1.19372344003136,3.44695889464629,139.910801582328,0.741701208042039,0,0,0,0,0,0,0,0,0,8.59203556213602,0,0.813277868507395,1.08005340821801,1.46361807210128,8.7345025498471,4.31565908431426,5.20716771069616,4.4498510137285,37.9771871744953,30.4456263412594,0,0.747582730219894,0.66183396182839,0.194451188344048,0.258319646955462,0.506868376472335,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,14.5107445513735,0,0,0,0,0,0,9.00347192132076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919217542250071,1.55572709461131,2.88449080134452,1.28367683836726,1.26348605881899,4.05566879824384,2.07488975524684,2.80924522409647,3.07320731543373,2.41228969613576,3.81034953026459,2.0859178670074,1.92909220463705,1.64834360321323,2.35518272215036,4.11443102862498,3.01708870470874,2.86123427936785,3.92435324907287,2.82328141245992,1.77690676572521,2.56099162021882,3.15683653725411,3.12349461845482,5.05028044491965,2.96587545310435,1.97008964751127,0.818462086339379,2.78886314134739,1.73615949883027,0,3.04111090979031,7.30561583764214,1.14772999241306,1.76473135295612,0.695603506861264 | |||
|short_description=p1@Slc9a3 | |||
}} |
Revision as of 01:06, 13 September 2013
Short description: | p1@Slc9a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc9a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -93bp_to_ENSMUST00000036208, NM_001081060, uc007res.1_5end |
EntrezGene: | Slc9a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.68e-08 | 9 |
epithelial cell of alimentary canal | 1.68e-08 | 9 |
columnar/cuboidal epithelial cell | 6.26e-08 | 7 |
brush border epithelial cell | 3.06e-07 | 6 |
gut absorptive cell | 3.06e-07 | 6 |
enterocyte | 3.06e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.63e-24 | 31 |
gastrointestinal system | 4.55e-21 | 47 |
mucosa | 1.29e-13 | 15 |
intestinal mucosa | 6.35e-12 | 13 |
wall of intestine | 6.35e-12 | 13 |
gastrointestinal system mucosa | 6.35e-12 | 13 |
organ component layer | 1.87e-09 | 24 |
epithelium of mucosa | 1.68e-08 | 9 |
gastrointestinal system epithelium | 1.68e-08 | 9 |
intestinal epithelium | 1.68e-08 | 9 |
simple columnar epithelium | 4.44e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.