FFCP PHASE1:Mm9::chr13:93962194..93962218,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100715|HGNC=|MCL_coexpression_id=86|UniProt=Q91YI6|association_with_transcript=19bp_to_ENSMUST00000048702,NM_133905,uc007rla.1_5end|description=CAGE_peak_3_at_Papd4_5end|id=chr13:93962194..93962218,-|ontology_enrichment_celltype=CL:0000107!7.79e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,7.78e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.02e-08!70;UBERON:0000926!6.03e-08!193;UBERON:0004120!6.03e-08!193;UBERON:0006603!6.03e-08!193;UBERON:0000010!6.41e-08!11;UBERON:0002410!7.79e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000010,6.40e-08,11;UBERON:0002410,7.78e-07,9|phase1_expression=2.7225304007815,1.04692622291808,3.18499467572675,2.41971369045464,4.50806156951712,1.84667199103079,3.73780224952841,2.1950964985068,33.2261384277934,26.9174205270293,10.1018601253048,10.2108363514031,2.39681021903688,2.71003247498892,10.3264026162855,5.87178275430495,4.19737126876888,8.67520954735154,9.59801035240171,6.36584477697045,3.99703463710028,13.9007331681239,12.7987896678078,2.71987118748791,2.52350209173887,1.72269589234506,1.7230479846363,1.50829862880122,2.09025761402011,2.52030129759931,2.66076612786366,0.635030673459631,1.84519436275371,0,1.73310971850765,0.997407872150954,2.04169356262369,2.92972141515835,3.1253413780952,3.66466620781659,3.52938892818609,4.78131839470912,0.485510353031154,7.93149953246137,8.00877756634165,11.7469921383476,7.04152209913235,1.74420125104357,2.63623419281366,2.72201858703997,2.93971485413261,1.43752564364972,7.55021727259814,5.07753499407941,6.38578218370682,14.9210472900849,15.4728057566929,9.28209766099396,1.21389876515759,0.528990979272033,3.1691570175309,2.71075625655306,4.4464739805557,17.5480444869873,19.7773272513395,14.209602298922,8.38880309451533,3.45796474789399,2.07379224616955,0.945041568321835,1.89292465216244,2.85650984403804,1.32521124570968,1.71487118900936,1.24599112323707,0.919218786610021,2.20231761998777,1.53224805702225,0.921639199537461,1.05509030184155,0.823388792421687,1.56274011167028,0.279182999001381,0.56276261003168,0.61119299110724,1.17851434189467,1.99320353118744,2.23679334990361,16.3568577599678,12.0914496170857,12.1743085254705,9.46466264679525,6.11974200336975,4.31762553310254,6.49776417447669,9.85659151614138,4.49422144421606,8.01022516116871,5.71529210126311,8.48014978824817,1.69012103732017,10.2661181931454,20.3844191765317,14.2213340630666,3.89683873820185,4.81383744402687,4.04419556011827,6.73684890342454,34.4387385250738,4.30482203287992,5.72501578328248,6.08930956624282,5.07354093963329,4.52167921657868,7.64326596382081,4.14699751387929,17.3036477414062,12.5801440520323,5.30766331169925,6.47067399789637,6.18356251689102,4.363877278217,0,1.75668478206928,1.8850203613211,4.59822699375465,13.8985544426868,10.1983464268879,12.5799524802334,1.19832511523858,0.915001205637253,1.25654352112864,2.60736480288415,1.53429274398198,1.66230435647648,1.94689515681309,7.63795228877372,7.83763914843586,4.80173241023982,4.62972082950243,4.81445638962004,3.90833577536904,4.86167750474443,3.16480117455002,5.8511389270142,3.71529788826064,3.27956035959051,1.29351685369508,4.95806383745537,10.0226222488944,7.9178005873777,8.54863356467542,5.56094498451196,8.00979983000983,5.96768195583036,8.55847347319521,7.72434506044558,7.20574139921202,9.37739548005456,7.24940203874257,4.92504725960302,3.78130329068131,5.44512891845984,5.70616272067471,3.70241070929708,4.18561100550734,2.95100741539581,3.26942958628075,4.44311594766397,3.447516745661,3.56702762001765,2.77779976108131,3.95190207523891,4.02619256281115,1.26173969138476,2.05809224758569,3.63460661282178,3.96675849995316,11.9441420299731,7.19933682767359,9.40732467651281,8.26902450955704,6.89371935919098,6.84812254005213,2.84717436926707,6.25856027951241,4.77536896720512,5.76973768919337,6.62877896205008,4.49409704327111,5.61958929674205,5.17767310461355,6.82804443431094,7.08340778180319,3.38123207019241,5.09128319613286,4.84881217919064,7.43439690837377,5.94423448968019,2.50937251565324,2.35498091762062,3.57851775373222,9.78293669387591,6.00642380577939,7.27268281918851,5.8464149220062,8.11440485554012,7.23531479257251,4.83789118384698,7.76779571117189,12.4844124616777,12.9043864198398,10.0637744569148,21.5841749647732,13.1055822708115,11.6186283855671,7.89348619496414,8.20153986317724,6.46636165583116,5.87423376488503,4.88894929326078,5.60158783058121,3.52035372432753,6.19773152534718,7.85544014923845,9.95181604074774,6.46304090835383,5.53661724121937,7.01600982092943,4.7520361267564,4.48980952851328,5.64131328467895,66.3481649332798,110.956759499017,6.39293554924747,6.89841865761831,0.80275294993896,0.937693492737625,5.40985319743029,3.28212205365685,16.0909191902291,14.8366722832723,15.0796378412959,17.4447222505363,14.704712489438,19.8153571552183,16.1924280669958,13.151513606009,16.602086673754,1.28528526568723,4.82596289708113,5.69809931735217,6.67836533349662,8.74341651754438,1.32745138339963,6.5550771761845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| ||
|EntrezGene=100715 | |||
|HGNC= | |||
|MCL_coexpression_id=86 | |||
|UniProt=Q91YI6 | |||
|association_with_transcript=19bp_to_ENSMUST00000048702,NM_133905,uc007rla.1_5end | |||
|description=CAGE_peak_3_at_Papd4_5end | |||
|id=chr13:93962194..93962218,- | |||
|ontology_enrichment_celltype=CL:0000107!7.79e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,7.78e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.02e-08!70;UBERON:0000926!6.03e-08!193;UBERON:0004120!6.03e-08!193;UBERON:0006603!6.03e-08!193;UBERON:0000010!6.41e-08!11;UBERON:0002410!7.79e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,6.40e-08,11;UBERON:0002410,7.78e-07,9 | |||
|phase1_expression=2.7225304007815,1.04692622291808,3.18499467572675,2.41971369045464,4.50806156951712,1.84667199103079,3.73780224952841,2.1950964985068,33.2261384277934,26.9174205270293,10.1018601253048,10.2108363514031,2.39681021903688,2.71003247498892,10.3264026162855,5.87178275430495,4.19737126876888,8.67520954735154,9.59801035240171,6.36584477697045,3.99703463710028,13.9007331681239,12.7987896678078,2.71987118748791,2.52350209173887,1.72269589234506,1.7230479846363,1.50829862880122,2.09025761402011,2.52030129759931,2.66076612786366,0.635030673459631,1.84519436275371,0,1.73310971850765,0.997407872150954,2.04169356262369,2.92972141515835,3.1253413780952,3.66466620781659,3.52938892818609,4.78131839470912,0.485510353031154,7.93149953246137,8.00877756634165,11.7469921383476,7.04152209913235,1.74420125104357,2.63623419281366,2.72201858703997,2.93971485413261,1.43752564364972,7.55021727259814,5.07753499407941,6.38578218370682,14.9210472900849,15.4728057566929,9.28209766099396,1.21389876515759,0.528990979272033,3.1691570175309,2.71075625655306,4.4464739805557,17.5480444869873,19.7773272513395,14.209602298922,8.38880309451533,3.45796474789399,2.07379224616955,0.945041568321835,1.89292465216244,2.85650984403804,1.32521124570968,1.71487118900936,1.24599112323707,0.919218786610021,2.20231761998777,1.53224805702225,0.921639199537461,1.05509030184155,0.823388792421687,1.56274011167028,0.279182999001381,0.56276261003168,0.61119299110724,1.17851434189467,1.99320353118744,2.23679334990361,16.3568577599678,12.0914496170857,12.1743085254705,9.46466264679525,6.11974200336975,4.31762553310254,6.49776417447669,9.85659151614138,4.49422144421606,8.01022516116871,5.71529210126311,8.48014978824817,1.69012103732017,10.2661181931454,20.3844191765317,14.2213340630666,3.89683873820185,4.81383744402687,4.04419556011827,6.73684890342454,34.4387385250738,4.30482203287992,5.72501578328248,6.08930956624282,5.07354093963329,4.52167921657868,7.64326596382081,4.14699751387929,17.3036477414062,12.5801440520323,5.30766331169925,6.47067399789637,6.18356251689102,4.363877278217,0,1.75668478206928,1.8850203613211,4.59822699375465,13.8985544426868,10.1983464268879,12.5799524802334,1.19832511523858,0.915001205637253,1.25654352112864,2.60736480288415,1.53429274398198,1.66230435647648,1.94689515681309,7.63795228877372,7.83763914843586,4.80173241023982,4.62972082950243,4.81445638962004,3.90833577536904,4.86167750474443,3.16480117455002,5.8511389270142,3.71529788826064,3.27956035959051,1.29351685369508,4.95806383745537,10.0226222488944,7.9178005873777,8.54863356467542,5.56094498451196,8.00979983000983,5.96768195583036,8.55847347319521,7.72434506044558,7.20574139921202,9.37739548005456,7.24940203874257,4.92504725960302,3.78130329068131,5.44512891845984,5.70616272067471,3.70241070929708,4.18561100550734,2.95100741539581,3.26942958628075,4.44311594766397,3.447516745661,3.56702762001765,2.77779976108131,3.95190207523891,4.02619256281115,1.26173969138476,2.05809224758569,3.63460661282178,3.96675849995316,11.9441420299731,7.19933682767359,9.40732467651281,8.26902450955704,6.89371935919098,6.84812254005213,2.84717436926707,6.25856027951241,4.77536896720512,5.76973768919337,6.62877896205008,4.49409704327111,5.61958929674205,5.17767310461355,6.82804443431094,7.08340778180319,3.38123207019241,5.09128319613286,4.84881217919064,7.43439690837377,5.94423448968019,2.50937251565324,2.35498091762062,3.57851775373222,9.78293669387591,6.00642380577939,7.27268281918851,5.8464149220062,8.11440485554012,7.23531479257251,4.83789118384698,7.76779571117189,12.4844124616777,12.9043864198398,10.0637744569148,21.5841749647732,13.1055822708115,11.6186283855671,7.89348619496414,8.20153986317724,6.46636165583116,5.87423376488503,4.88894929326078,5.60158783058121,3.52035372432753,6.19773152534718,7.85544014923845,9.95181604074774,6.46304090835383,5.53661724121937,7.01600982092943,4.7520361267564,4.48980952851328,5.64131328467895,66.3481649332798,110.956759499017,6.39293554924747,6.89841865761831,0.80275294993896,0.937693492737625,5.40985319743029,3.28212205365685,16.0909191902291,14.8366722832723,15.0796378412959,17.4447222505363,14.704712489438,19.8153571552183,16.1924280669958,13.151513606009,16.602086673754,1.28528526568723,4.82596289708113,5.69809931735217,6.67836533349662,8.74341651754438,1.32745138339963,6.5550771761845,5.13950046840077,3.20628635585027,2.36241514304618,5.53383266299069,6.97756391554197,6.5436071305951,4.27796854061666,3.47640433729398,6.32511651449993,6.18813259489121,2.38307724027652,5.40183282093931,2.32845630808958,5.78709994585299,4.78818630834139,4.28085162244969,3.78462747384878,1.2178597964584,10.0908834467395,14.192748747876,1.54369878638473,7.25499512942512,9.04200789497071,5.36785031860587,2.14870219205646,3.28281799490123,6.41257840585672,1.66882771809459,11.7900907750518,7.84270098260245,8.14855920426731,8.09984365120171,5.60446333656203,7.32090154260872,8.66889992968662,9.79660166265606,9.53579819250524,0.954670618015114,6.95939185878498,7.11618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| |||
|short_description=p3@Papd4 | |||
}} | |||
Revision as of 01:17, 13 September 2013
| Short description: | p3@Papd4 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Papd4_5end |
| Coexpression cluster: | MCL_coexpression_mm9:86 |
| Association with transcript: | 19bp_to_ENSMUST00000048702, NM_133905, uc007rla.1_5end |
| EntrezGene: | Papd4 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| autonomic neuron | 7.78e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| peripheral nervous system | 6.40e-08 | 11 |
| autonomic nervous system | 7.78e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
