FFCP PHASE1:Mm9::chr14:102283255..102283262,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=380928|HGNC=|MCL_coexpression_id=19|UniProt=|association_with_transcript=-41bp_to_ENSMUST00000160876_5end|description=CAGE_peak_28_at_Lmo7_5end|id=chr14:102283255..102283262,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.32e-41!18;UBERON:0000948!1.32e-41!18;UBERON:0005498!1.32e-41!18;UBERON:0004140!1.32e-41!18;UBERON:0009881!1.32e-41!18;UBERON:0004141!1.32e-41!18;UBERON:0003084!1.32e-41!18;UBERON:0007005!1.32e-41!18;UBERON:0004139!1.32e-41!18;UBERON:0004291!1.32e-41!18;UBERON:0004535!6.61e-32!23;UBERON:0001009!6.61e-32!23;UBERON:0004872!2.59e-21!33;UBERON:0003103!1.22e-15!43;UBERON:0003914!4.76e-14!47;UBERON:0000025!3.02e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.31e-53,18;UBERON:0000948,8.31e-53,18;UBERON:0005498,8.31e-53,18;UBERON:0004140,8.31e-53,18;UBERON:0009881,8.31e-53,18;UBERON:0004141,8.31e-53,18;UBERON:0003084,8.31e-53,18;UBERON:0007005,8.31e-53,18;UBERON:0004139,8.31e-53,18;UBERON:0004291,8.31e-53,18;UBERON:0004535,3.06e-41,23;UBERON:0001009,3.06e-41,23;UBERON:0004872,1.34e-28,33;UBERON:0003103,8.03e-22,43;UBERON:0003914,6.49e-20,47;UBERON:0003081,1.95e-10,87;UBERON:0010314,7.96e-10,92;UBERON:0000025,9.12e-08,114;UBERON:0000926,2.47e-07,120;UBERON:0004120,2.47e-07,120;UBERON:0006603,2.47e-07,120;UBERON:0004111,3.37e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.703578179943289,0.720248245844059,1.42046841351126,2.55793501271625,2.00547246753592,1.39520366850245,1.3413670069981,2.56883753207773,0.658239399653922,1.80584210487005,2.26992666728396,3.07019973593198,2.63460138349261,2.14730270016595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p28@Lmo7}} | ||
|EntrezGene=380928 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|UniProt= | |||
|association_with_transcript=-41bp_to_ENSMUST00000160876_5end | |||
|description=CAGE_peak_28_at_Lmo7_5end | |||
|id=chr14:102283255..102283262,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.32e-41!18;UBERON:0000948!1.32e-41!18;UBERON:0005498!1.32e-41!18;UBERON:0004140!1.32e-41!18;UBERON:0009881!1.32e-41!18;UBERON:0004141!1.32e-41!18;UBERON:0003084!1.32e-41!18;UBERON:0007005!1.32e-41!18;UBERON:0004139!1.32e-41!18;UBERON:0004291!1.32e-41!18;UBERON:0004535!6.61e-32!23;UBERON:0001009!6.61e-32!23;UBERON:0004872!2.59e-21!33;UBERON:0003103!1.22e-15!43;UBERON:0003914!4.76e-14!47;UBERON:0000025!3.02e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.31e-53,18;UBERON:0000948,8.31e-53,18;UBERON:0005498,8.31e-53,18;UBERON:0004140,8.31e-53,18;UBERON:0009881,8.31e-53,18;UBERON:0004141,8.31e-53,18;UBERON:0003084,8.31e-53,18;UBERON:0007005,8.31e-53,18;UBERON:0004139,8.31e-53,18;UBERON:0004291,8.31e-53,18;UBERON:0004535,3.06e-41,23;UBERON:0001009,3.06e-41,23;UBERON:0004872,1.34e-28,33;UBERON:0003103,8.03e-22,43;UBERON:0003914,6.49e-20,47;UBERON:0003081,1.95e-10,87;UBERON:0010314,7.96e-10,92;UBERON:0000025,9.12e-08,114;UBERON:0000926,2.47e-07,120;UBERON:0004120,2.47e-07,120;UBERON:0006603,2.47e-07,120;UBERON:0004111,3.37e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.703578179943289,0.720248245844059,1.42046841351126,2.55793501271625,2.00547246753592,1.39520366850245,1.3413670069981,2.56883753207773,0.658239399653922,1.80584210487005,2.26992666728396,3.07019973593198,2.63460138349261,2.14730270016595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p28@Lmo7 | |||
}} |
Revision as of 01:25, 13 September 2013
Short description: | p28@Lmo7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_Lmo7_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | -41bp_to_ENSMUST00000160876_5end |
EntrezGene: | Lmo7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 8.31e-53 | 18 |
heart | 8.31e-53 | 18 |
primitive heart tube | 8.31e-53 | 18 |
primary heart field | 8.31e-53 | 18 |
anterior lateral plate mesoderm | 8.31e-53 | 18 |
heart tube | 8.31e-53 | 18 |
heart primordium | 8.31e-53 | 18 |
cardiac mesoderm | 8.31e-53 | 18 |
cardiogenic plate | 8.31e-53 | 18 |
heart rudiment | 8.31e-53 | 18 |
cardiovascular system | 3.06e-41 | 23 |
circulatory system | 3.06e-41 | 23 |
splanchnic layer of lateral plate mesoderm | 1.34e-28 | 33 |
compound organ | 8.03e-22 | 43 |
epithelial tube | 6.49e-20 | 47 |
lateral plate mesoderm | 1.95e-10 | 87 |
structure with developmental contribution from neural crest | 7.96e-10 | 92 |
tube | 9.12e-08 | 114 |
mesoderm | 2.47e-07 | 120 |
mesoderm-derived structure | 2.47e-07 | 120 |
presumptive mesoderm | 2.47e-07 | 120 |
anatomical conduit | 3.37e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.