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FFCP PHASE1:Mm9::chr14:52604532..52604583,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=268739|HGNC=|MCL_coexpression_id=1307|UniProt=Q3UPH7|association_with_transcript=24bp_to_ENSMUST00000093813,ENSMUST00000100639,NM_001145921,NM_001145922,NM_198249,uc007tno.2,uc007tnp.2,uc007tnq.2,uc007tnr.2,uc007tns.2,uc007tnt.2_5end|description=CAGE_peak_1_at_Arhgef40_5end|id=chr14:52604532..52604583,+|ontology_enrichment_celltype=CL:0000107!1.93e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.89e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!5.71e-08!333;UBERON:0002410!1.93e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.89e-07,9|phase1_expression=20.3389035823088,0.348975407639361,0,0,0,1.84667199103079,3.03696432774183,0,0.140788722151667,0,0,0,0,0,1.66554880907831,0.404950534779652,0,0.157731082679119,0,0,8.92954546586233,2.28369187762036,3.39559725880616,0.639969691173627,0.45881856213434,0,1.29228598847722,0.861884930743556,0.380046838912748,1.00812051903972,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,13.8486499773135,17.335455238537,10.4621648732158,37.5547845287059,14.3896603211095,23.9457939180574,23.9148775861369,17.0783434382942,15.8127820801469,0,0,0,16.7218633423366,20.6304076755905,15.4701627683233,7.68802551266472,9.52183762689659,10.775133859605,22.0248945844936,14.2287167377782,3.1496490104849,3.9554654502679,3.5524005747305,26.0652096151012,21.1320067926855,9.7468235569969,7.83034442323806,6.73039876324422,12.5686433137674,14.7981922437581,6.98197555525238,10.1596199279331,7.35375029288017,9.91042928994498,10.9811110753261,9.67721159514334,15.0350368012421,11.7104183811084,9.89735404057844,7.2587579740359,7.87867654044352,11.9182633265912,19.1508580557884,12.8134512719193,12.1159639786445,8.85996461998253,12.0158780569789,11.5945795480671,7.74381489283248,4.75979933595425,6.47643829965381,5.19821133958135,3.58421509677868,6.74133216632409,16.1908806449155,16.3665182899807,15.546941278455,25.6335023993559,29.5150898052931,71.3454671178608,92.4386714099331,8.01016851741492,9.88103475352884,10.6160133453104,5.02409070763864,1.55362730188303,9.79718117827843,14.7462527751215,14.9188084372949,15.912469310668,11.3041980414467,15.7568867561844,15.9596570988688,3.46072954828123,18.5087176857487,3.5384422077995,21.6767578929528,10.3795513676385,6.30337829075789,3.72783522436244,7.31951992528868,10.0534419270458,2.55457055208591,0.838705871541442,0,0.635351135365324,10.3355541189328,5.03250663100489,7.413606774659,3.65031072403781,7.67146371990992,11.0127663616567,11.356888414743,29.1260580611905,12.4406970610093,16.4269792981889,6.73413938836717,25.893968149578,19.5416788768452,19.086585759367,20.7972648613287,20.0707672496417,19.0889443224426,19.2088535347444,8.53721123438752,37.2932627773817,37.2538977930604,36.2459315777735,25.8650964264538,36.7022368977789,27.5119211552512,24.2822920961373,23.0879749509452,0,0.51469581422943,0,11.8061690345236,18.7620847984877,15.6653993471083,18.2293446400612,16.1346670032871,18.5120535464854,16.7424440220294,15.2915838797783,15.6465558772007,18.9243827400503,12.9692296622485,14.8355921468916,17.3977985036145,14.9294078397914,18.2520729514106,5.67782861123144,10.0846520131699,0.660837565967596,1.85115396664481,25.3813018136928,30.6552406855779,16.2373001265838,12.9077455758939,11.7860363237781,9.89173255785308,5.21981967698963,7.74085087202851,9.29940272560997,8.55512829776949,9.35827618171777,2.69645822596266,4.53889904736858,6.37252074413975,15.1734320762465,16.7945313536301,25.9227792048085,15.2738495883986,18.4254862809244,19.2172146499473,17.453284246295,8.11855813887812,8.00693511991011,9.87177311374404,5.03969466048153,5.5058884886311,4.52085688760367,2.24862112384854,3.65148218499305,4.3411888755435,3.31013607315846,5.17853047411459,4.21551589615092,3.56929837144506,8.62609239164127,4.46569137202204,4.99260276983297,7.32478746046624,5.20252499213545,11.5786445127208,8.68339993783042,17.2437184711141,18.2520773615069,23.7643120085263,21.8261930908307,21.4408009525524,20.2337094753112,23.2209040950781,21.2807444543358,19.710357378741,25.8316725225129,13.6006551214063,13.296743603674,16.6346417368738,0,0,14.7529281905711,14.3487108078461,9.79358598925531,13.5965556446956,8.6885521049638,16.6630811954886,51.7433479842661,42.5578231283336,56.6563536037261,58.5473554983752,57.2592592391753,70.2029796356304,50.1965270076869,54.9441012873266,66.0130589170694,8.03303291054518,12.9165477539524,27.2440373610901,23.7814960656221,23.7556977080451,3.98235415019888,12.867373716214,12.3952658355548,8.67583366877131,13.8791889653963,11.6825356218692,10.3371317267288,11.2695456138027,12.83390562185,6.32073515871632,0,6.18813259489121,13.6175842301515,26.8291030106652,23.0258457133303,17.7899739076222,17.2020026633005,19.4422011186257,20.2395295340609,22.2259412853657,1.87737366450968,1.48282449604674,9.70324951441832,9.39851641766436,17.115229229766,13.932285658404,8.35606408021955,8.042904087508,3.78925087618806,7.78786268444141,0.341741761595705,13.4151464176095,8.33375373163703,2.26042148405629,1.91371918809435,1.83022538565218,2.71965487990169,2.37917468950219,3.04039942369732,3.81868247206045,23.0925275314229,23.7883776538413,18.9009346438152,20.6997413054324,16.5955548447095,14.1607563704062,17.1092653351445,10.2084817373772,6.35113369129785,12.4267862617385,0,15.8487538806618,18.2004339502807,28.7787758749191,24.023727166858,24.3296820706721,24.4103056383168,17.9682051084651,11.7442465756796,3.38217769156408,4.03242008761012,4.10814456816632,21.0834223901771,16.1256202748779,8.05509102462329,6.98204113103178,5.36439657909415,4.44723163223885,4.13530676088816,3.12995994839258,2.66723823292499,2.01652370273681,1.07203668813728,2.30908419936791,1.75315353272353,7.70883304291719,0.443971906748129,0.897138566094757,0.503653849092235,16.4211154927362,9.94717119891265,13.5532201957776,7.93163002592544,7.02200945649509,9.03602948187307,3.68260189205742,6.87474616127276,4.46818274093588,5.48066015816514,2.2661816921691,2.02506750069542,3.60256962579376,7.25027854374727,6.21312374102184,16.2946135707157,31.1239401252804,20.1465654789878,21.8796045361465,16.5594398476106,13.604419625301,12.6680634846921,15.658664350156,15.0832028508153,15.6672271293554,15.2087579934144,14.5242282867279,16.6681883296391,16.1343384060271,15.737318493838,18.5754539600399,18.7732608030666,16.3972837394149,16.4834360321323,17.3694725758589,16.1148548621145,14.3755402989063,16.9289694862598,14.2439488299682,18.2572198005741,15.7383170678518,19.0245091787683,16.8364615320219,19.4199882799582,12.906272248128,17.7952527186261,15.7607171800902,15.5507796404482,15.6486209597826,17.3615949883027,18.2361721894701,18.2466654587419,18.9086527562503,25.4413481651562,18.0884963678003,12.5208631235028|short_description=p1@Arhgef40}}
|EntrezGene=268739
|HGNC=
|MCL_coexpression_id=1307
|UniProt=Q3UPH7
|association_with_transcript=24bp_to_ENSMUST00000093813,ENSMUST00000100639,NM_001145921,NM_001145922,NM_198249,uc007tno.2,uc007tnp.2,uc007tnq.2,uc007tnr.2,uc007tns.2,uc007tnt.2_5end
|description=CAGE_peak_1_at_Arhgef40_5end
|id=chr14:52604532..52604583,+
|ontology_enrichment_celltype=CL:0000107!1.93e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000107,1.89e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!5.71e-08!333;UBERON:0002410!1.93e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.89e-07,9
|phase1_expression=20.3389035823088,0.348975407639361,0,0,0,1.84667199103079,3.03696432774183,0,0.140788722151667,0,0,0,0,0,1.66554880907831,0.404950534779652,0,0.157731082679119,0,0,8.92954546586233,2.28369187762036,3.39559725880616,0.639969691173627,0.45881856213434,0,1.29228598847722,0.861884930743556,0.380046838912748,1.00812051903972,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,13.8486499773135,17.335455238537,10.4621648732158,37.5547845287059,14.3896603211095,23.9457939180574,23.9148775861369,17.0783434382942,15.8127820801469,0,0,0,16.7218633423366,20.6304076755905,15.4701627683233,7.68802551266472,9.52183762689659,10.775133859605,22.0248945844936,14.2287167377782,3.1496490104849,3.9554654502679,3.5524005747305,26.0652096151012,21.1320067926855,9.7468235569969,7.83034442323806,6.73039876324422,12.5686433137674,14.7981922437581,6.98197555525238,10.1596199279331,7.35375029288017,9.91042928994498,10.9811110753261,9.67721159514334,15.0350368012421,11.7104183811084,9.89735404057844,7.2587579740359,7.87867654044352,11.9182633265912,19.1508580557884,12.8134512719193,12.1159639786445,8.85996461998253,12.0158780569789,11.5945795480671,7.74381489283248,4.75979933595425,6.47643829965381,5.19821133958135,3.58421509677868,6.74133216632409,16.1908806449155,16.3665182899807,15.546941278455,25.6335023993559,29.5150898052931,71.3454671178608,92.4386714099331,8.01016851741492,9.88103475352884,10.6160133453104,5.02409070763864,1.55362730188303,9.79718117827843,14.7462527751215,14.9188084372949,15.912469310668,11.3041980414467,15.7568867561844,15.9596570988688,3.46072954828123,18.5087176857487,3.5384422077995,21.6767578929528,10.3795513676385,6.30337829075789,3.72783522436244,7.31951992528868,10.0534419270458,2.55457055208591,0.838705871541442,0,0.635351135365324,10.3355541189328,5.03250663100489,7.413606774659,3.65031072403781,7.67146371990992,11.0127663616567,11.356888414743,29.1260580611905,12.4406970610093,16.4269792981889,6.73413938836717,25.893968149578,19.5416788768452,19.086585759367,20.7972648613287,20.0707672496417,19.0889443224426,19.2088535347444,8.53721123438752,37.2932627773817,37.2538977930604,36.2459315777735,25.8650964264538,36.7022368977789,27.5119211552512,24.2822920961373,23.0879749509452,0,0.51469581422943,0,11.8061690345236,18.7620847984877,15.6653993471083,18.2293446400612,16.1346670032871,18.5120535464854,16.7424440220294,15.2915838797783,15.6465558772007,18.9243827400503,12.9692296622485,14.8355921468916,17.3977985036145,14.9294078397914,18.2520729514106,5.67782861123144,10.0846520131699,0.660837565967596,1.85115396664481,25.3813018136928,30.6552406855779,16.2373001265838,12.9077455758939,11.7860363237781,9.89173255785308,5.21981967698963,7.74085087202851,9.29940272560997,8.55512829776949,9.35827618171777,2.69645822596266,4.53889904736858,6.37252074413975,15.1734320762465,16.7945313536301,25.9227792048085,15.2738495883986,18.4254862809244,19.2172146499473,17.453284246295,8.11855813887812,8.00693511991011,9.87177311374404,5.03969466048153,5.5058884886311,4.52085688760367,2.24862112384854,3.65148218499305,4.3411888755435,3.31013607315846,5.17853047411459,4.21551589615092,3.56929837144506,8.62609239164127,4.46569137202204,4.99260276983297,7.32478746046624,5.20252499213545,11.5786445127208,8.68339993783042,17.2437184711141,18.2520773615069,23.7643120085263,21.8261930908307,21.4408009525524,20.2337094753112,23.2209040950781,21.2807444543358,19.710357378741,25.8316725225129,13.6006551214063,13.296743603674,16.6346417368738,0,0,14.7529281905711,14.3487108078461,9.79358598925531,13.5965556446956,8.6885521049638,16.6630811954886,51.7433479842661,42.5578231283336,56.6563536037261,58.5473554983752,57.2592592391753,70.2029796356304,50.1965270076869,54.9441012873266,66.0130589170694,8.03303291054518,12.9165477539524,27.2440373610901,23.7814960656221,23.7556977080451,3.98235415019888,12.867373716214,12.3952658355548,8.67583366877131,13.8791889653963,11.6825356218692,10.3371317267288,11.2695456138027,12.83390562185,6.32073515871632,0,6.18813259489121,13.6175842301515,26.8291030106652,23.0258457133303,17.7899739076222,17.2020026633005,19.4422011186257,20.2395295340609,22.2259412853657,1.87737366450968,1.48282449604674,9.70324951441832,9.39851641766436,17.115229229766,13.932285658404,8.35606408021955,8.042904087508,3.78925087618806,7.78786268444141,0.341741761595705,13.4151464176095,8.33375373163703,2.26042148405629,1.91371918809435,1.83022538565218,2.71965487990169,2.37917468950219,3.04039942369732,3.81868247206045,23.0925275314229,23.7883776538413,18.9009346438152,20.6997413054324,16.5955548447095,14.1607563704062,17.1092653351445,10.2084817373772,6.35113369129785,12.4267862617385,0,15.8487538806618,18.2004339502807,28.7787758749191,24.023727166858,24.3296820706721,24.4103056383168,17.9682051084651,11.7442465756796,3.38217769156408,4.03242008761012,4.10814456816632,21.0834223901771,16.1256202748779,8.05509102462329,6.98204113103178,5.36439657909415,4.44723163223885,4.13530676088816,3.12995994839258,2.6672382329249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|short_description=p1@Arhgef40
}}

Revision as of 02:16, 13 September 2013

Short description:p1@Arhgef40
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arhgef40_5end
Coexpression cluster:MCL_coexpression_mm9:1307
Association with transcript: 24bp_to_ENSMUST00000093813, ENSMUST00000100639, NM_001145921, NM_001145922, NM_198249, uc007tno.2, uc007tnp.2, uc007tnq.2, uc007tnr.2, uc007tns.2, uc007tnt.2_5end
EntrezGene:Arhgef40
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arhgef40

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.34
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.85
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D917.34
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.46
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B737.55
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.39
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B823.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C323.91
Mouse Astrocytes, donor2.CNhs12078.11552-120C417.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.72
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.63
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.47
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C622.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C826.07
Mouse Microglia, donor2.CNhs12634.11736-123E821.13
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.80
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.04
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.71
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.15
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.12
Mouse Schwann, donor1.CNhs12507.11728-123D98.86
Mouse Schwann, donor2.CNhs12573.11746-123F912.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.59
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.55
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G625.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H129.52
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I871.35
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B692.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.62
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.02
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D79.80
adrenal gland, embryo E14.CNhs11038.406-44C514.75
adrenal gland, embryo E16.CNhs11004.1254-43D614.92
adrenal gland, embryo E17.CNhs11043.1263-45I115.91
adrenal gland, embryo E18.CNhs11026.1262-18F511.30
adrenal gland, neonate N00.CNhs11191.1311-23C115.76
adrenal gland, neonate N25.CNhs11223.1377-27I315.96
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H118.51
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F521.68
bone (os femoris), neonate N16.CNhs11225.1525-43A610.38
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I210.05
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A410.34
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F17.41
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F211.01
diencephalon, neonate N30.CNhs11201.1388-42B211.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B129.13
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.44
epididymis, adult.CNhs10490.58-23B216.43
eyeball, adult.CNhs10484.31-12G46.73
eyeball, embryo E12.CNhs11016.345-16C625.89
eyeball, embryo E14.CNhs10521.399-16E219.54
eyeball, embryo E15.CNhs10593.426-16C919.09
eyeball, embryo E17.CNhs11023.1261-18D420.80
eyeball, neonate N00.CNhs11207.633-15C620.07
eyeball, neonate N01.CNhs11140.1532-43E719.09
eyeball, neonate N02.CNhs11205.1551-44G819.21
eyeball, neonate N16.CNhs11188.777-19A28.54
forelimb, embryo E11.CNhs10596.335-25E237.29
forelimb, embryo E12.CNhs10600.359-14H237.25
forelimb, embryo E13.CNhs10589.384-1E236.25
forelimb, embryo E14.CNhs10577.413-26A825.87
forelimb, embryo E15.CNhs11007.437-20E736.70
forelimb, embryo E17.CNhs10598.1517-43C427.51
forelimb, embryo E18.CNhs11008.1520-43B524.28
gonad, embryo E13.CNhs11044.1564-45I623.09
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E911.81
heart, embryo E12.CNhs11015.353-12F518.76
heart, embryo E13.CNhs11013.376-3I915.67
heart, embryo E14.CNhs10597.403-26D418.23
heart, embryo E15.CNhs11017.431-16C816.13
heart, embryo E16.CNhs11021.457-17C618.51
heart, embryo E17.CNhs11025.479-18E516.74
heart, embryo E18.CNhs11030.1283-20G315.29
heart, neonate N00.CNhs11213.639-21E315.65
heart, neonate N03.CNhs11221.1349-25I218.92
heart, neonate N10.CNhs11118.749-24G112.97
heart, neonate N16.CNhs11209.782-15G114.84
heart, neonate N20.CNhs11127.821-26I617.40
heart, neonate N25.CNhs11196.1351-25D314.93
heart, neonate N30.CNhs11202.1390-42D218.25
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G110.08
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I525.38
intestine, embryo E13.CNhs11010.381-16D530.66
intestine, embryo E15.CNhs10602.976-16D816.24
intestine, embryo E16.CNhs10585.463-22H412.91
intestine, embryo E17.CNhs10582.482-18D311.79
intestine, embryo E18.CNhs10526.1289-20F79.89
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E97.74
intestine, neonate N06.CNhs11102.688-20B89.30
intestine, neonate N07.CNhs11095.720-20F28.56
intestine, neonate N10.CNhs11098.755-23A59.36
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G16.37
kidney, embryo E14.CNhs10606.411-4I915.17
kidney, embryo E15.CNhs10997.434-16F816.79
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I215.27
kidney, embryo E18.CNhs11001.1288-20C718.43
kidney, neonate N00.CNhs11214.646-21G719.22
kidney, neonate N10.CNhs11206.758-6D517.45
kidney, neonate N20.CNhs11113.832-19I18.12
kidney, neonate N25.CNhs11122.1353-25F38.01
kidney, neonate N30.CNhs11203.1385-42H19.87
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F85.51
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F44.22
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A37.32
liver, neonate N25.CNhs11198.1368-26H15.20
liver, neonate N30.CNhs11106.1382-42D111.58
lung, adult.CNhs10474.28-22B18.68
lung, embryo E12.CNhs10522.354-16G217.24
lung, embryo E14.CNhs10604.404-26F818.25
lung, embryo E15.CNhs11020.432-17C523.76
lung, embryo E16.CNhs10998.458-17B621.83
lung, embryo E17.CNhs10605.480-44A621.44
lung, embryo E18.CNhs10583.1287-20I620.23
lung, neonate N00.CNhs11224.640-42C623.22
lung, neonate N06.CNhs11212.683-20E521.28
lung, neonate N07.CNhs11111.715-19A319.71
lung, neonate N10.CNhs11219.750-23E625.83
lung, neonate N20.CNhs11109.822-18A413.60
lung, neonate N25.CNhs11119.1359-25C713.30
lung, neonate N30.CNhs11133.1394-42H216.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B614.75
mammary gland, adult pregnant day19.CNhs10476.588-5H214.35
medulla oblongata, adult.CNhs10477.17-12C29.79
medulla oblongata, neonate N30.CNhs11200.1396-42A313.60
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.69
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.66
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E151.74
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E242.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E356.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D758.55
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D857.26
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D970.20
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D450.20
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D554.94
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D666.01
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I712.92
ovary, embryo E18.CNhs11040.505-44H727.24
ovary, neonate N00.CNhs11217.1299-22I423.78
oviduct, adult pregnant day01.CNhs10500.988-6G623.76
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F412.87
pancreas, embryo E15.CNhs11042.1556-45F212.40
pancreas, embryo E16.CNhs11003.460-26E58.68
pancreas, embryo E17.CNhs10599.1558-45G313.88
pancreas, embryo E18.CNhs10580.1535-43I711.68
pancreas, neonate N00.CNhs11105.645-26G910.34
pancreas, neonate N01.CNhs11138.1531-43D711.27
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G813.62
pituitary gland, embryo E12.CNhs11018.346-16E626.83
pituitary gland, embryo E13.CNhs11009.370-44C723.03
pituitary gland, embryo E14.CNhs11037.398-44A517.79
pituitary gland, embryo E15.CNhs10592.427-16B917.20
pituitary gland, embryo E16.CNhs11036.449-43F619.44
pituitary gland, embryo E17.CNhs11039.1265-44F520.24
pituitary gland, neonate N00.CNhs11190.1308-22E922.23
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F89.70
skin, adult.CNhs10492.30-1C39.40
skin, neonate N00.CNhs11124.650-25G417.12
skin, neonate N03.CNhs11215.662-22H313.93
skin, neonate N06.CNhs11097.693-20I58.36
skin, neonate N10.CNhs11108.762-6C48.04
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C97.79
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C113.42
spleen, embryo E18.CNhs11011.1271-21F28.33
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E323.09
stomach, embryo E15.CNhs10603.1252-16G823.79
stomach, embryo E16.CNhs11022.459-17D418.90
stomach, embryo E17.CNhs11006.1035-18D520.70
stomach, embryo E18.CNhs10999.1286-20C616.60
stomach, neonate N03.CNhs11193.1340-24B814.16
stomach, neonate N07.CNhs11210.718-18A917.11
stomach, neonate N25.CNhs11104.1355-25E410.21
stomach, neonate N30.CNhs11134.1386-42I16.35
submandibular gland, adult.CNhs10469.59-29C112.43
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F515.85
testis, embryo E15.CNhs11034.443-27C518.20
testis, embryo E16.CNhs11033.470-26G528.78
testis, embryo E17.CNhs11029.486-18I524.02
testis, embryo E18.CNhs11027.503-18G524.33
testis, neonate N00.CNhs11189.1300-22B724.41
testis, neonate N07.CNhs11222.726-26I417.97
testis, neonate N10.CNhs11204.763-44D911.74
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I421.08
thymus, embryo E15.CNhs11005.430-45I216.13
thymus, embryo E16.CNhs11002.456-26C58.06
thymus, embryo E17.CNhs10581.478-18C16.98
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F84.45
thymus, neonate N03.CNhs11137.2104-43C74.14
thymus, neonate N06.CNhs11197.681-26C43.13
thymus, neonate N07.CNhs11211.713-19D32.67
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B47.71
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E416.42
uterus, adult pregnant day19.CNhs10497.590-15F59.95
uterus, adult.CNhs10509.92-27E513.55
vagina, adult.CNhs10502.89-27D57.93
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I816.29
whole body, embryo E12.CNhs10587.857-27C931.12
whole body, embryo E13.CNhs10512.372-23H220.15
whole body, embryo E14.5.CNhs10578.420-27D221.88
whole body, embryo E14.CNhs10519.395-14B116.56
whole body, embryo E16.CNhs10514.453-14F213.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.67
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.21
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.52
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.74
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.77
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.37
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.38
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.93
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.24
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.74
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.65
whole body, embryo E17.5.CNhs10513.490-9F917.36
whole body, embryo E17.CNhs10517.475-3I518.24
whole body, embryo E18.CNhs10516.493-3B318.25
whole body, neonate N00.CNhs10525.657-19C218.91
whole body, neonate N01.CNhs10576.659-23C625.44
whole body, neonate N06.CNhs10515.692-21D118.09
whole body, neonate N10.CNhs10518.761-6B412.52





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron1.89e-079

Uber anatomy
Ontology termp-valuen
autonomic nervous system1.89e-079







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