FFCP PHASE1:Mm9::chr15:3201263..3201268,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=111|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:3201263..3201268,+|id=chr15:3201263..3201268,+|ontology_enrichment_celltype=CL:0000181!5.86e-07!5;CL:0000417!5.86e-07!5;CL:0000668!5.86e-07!5;CL:0000412!5.86e-07!5;CL:0000182!5.86e-07!5|ontology_enrichment_celltype_v019_2=CL:0000182,1.26e-14,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.75e-22!22;UBERON:0007499!1.75e-22!22;UBERON:0006925!1.75e-22!22;UBERON:0009497!1.75e-22!22;UBERON:0000015!1.75e-22!22;UBERON:0002423!1.75e-22!22;UBERON:0006235!1.75e-22!22;UBERON:0008835!1.75e-22!22;UBERON:0003894!1.75e-22!22;UBERON:0004161!1.75e-22!22;UBERON:0008836!1.75e-22!22;UBERON:0009854!3.97e-21!23;UBERON:0009856!3.97e-21!23;UBERON:0002365!9.47e-19!25;UBERON:0002330!9.47e-19!25;UBERON:0003914!1.35e-11!47;UBERON:0005256!3.31e-11!47;UBERON:0005172!6.37e-08!49;UBERON:0005173!6.37e-08!49;UBERON:0002417!6.37e-08!49;UBERON:0000916!6.37e-08!49;UBERON:0003929!6.71e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.88e-38,22;UBERON:0007499,1.88e-38,22;UBERON:0006925,1.88e-38,22;UBERON:0009497,1.88e-38,22;UBERON:0000015,1.88e-38,22;UBERON:0002423,1.88e-38,22;UBERON:0006235,1.88e-38,22;UBERON:0008835,1.88e-38,22;UBERON:0003894,1.88e-38,22;UBERON:0004161,1.88e-38,22;UBERON:0008836,1.88e-38,22;UBERON:0009854,1.35e-36,23;UBERON:0009856,1.35e-36,23;UBERON:0002365,2.47e-33,25;UBERON:0002330,2.47e-33,25;UBERON:0005256,1.19e-16,45;UBERON:0003914,9.17e-16,47;UBERON:0005172,5.97e-15,49;UBERON:0005173,5.97e-15,49;UBERON:0002417,5.97e-15,49;UBERON:0000916,5.97e-15,49;UBERON:0003929,7.25e-13,55;UBERON:0002368,1.89e-11,60;UBERON:0003104,3.40e-11,61;UBERON:0009142,3.40e-11,61;UBERON:0002530,2.97e-10,65;UBERON:0000490,4.89e-10,66;UBERON:0009569,4.89e-10,66;UBERON:0005911,2.01e-09,69;UBERON:0000949,7.31e-09,72;UBERON:0005177,1.01e-07,79;UBERON:0001041,1.41e-07,80|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,2.89864488701678,19.7897491705719,19.7191686775248,19.4293148989614,5.19821133958135,16.1289679355041,0.702222100658759,0.170430322578058,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0.461230994512117,0,0.587943535678524,0,10.6293836125781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0.592905254174298,0.166845105716094,0.196558995113203,0.449724224769707,3.24576194221605,4.10001171579109,12.4766667372896,15.247895284893,42.6415646418343,1.09824565275233,15.814502718009,8.55924179637558,1.5601883655728,8.5876818502018,3.40855085691633,5.30687873499704,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0.516856586336442,0.727067458955011,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0.991841468704031,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.919217542250071,0.666740183404846,1.44224540067226,0.962757628775446,2.27427490587418,1.01391719956096,0.754505365544305,1.12369808963859,0.89635213366817,0.861532034334199,0.952587382566147,0.927074607558844,1.15745532278223,1.64834360321323,0.147198920134397,0.342869252385415,1.4198064492747,0.715308569841963,1.74415699958794,0.376437521661322,1.69229215783353,1.28049581010941,0.789209134313529,0.543216455383447,1.12228454331548,0.593175090620871,1.18205378850676,0.818462086339379,0.619747364743864,0.771626443924566,0,1.16965804222704,2.57845264857958,0.191288332068843,0,0|short_description=p@chr15:3201263..3201268,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=111 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:3201263..3201268,+ | |||
|id=chr15:3201263..3201268,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.86e-07!5;CL:0000417!5.86e-07!5;CL:0000668!5.86e-07!5;CL:0000412!5.86e-07!5;CL:0000182!5.86e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.26e-14,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.75e-22!22;UBERON:0007499!1.75e-22!22;UBERON:0006925!1.75e-22!22;UBERON:0009497!1.75e-22!22;UBERON:0000015!1.75e-22!22;UBERON:0002423!1.75e-22!22;UBERON:0006235!1.75e-22!22;UBERON:0008835!1.75e-22!22;UBERON:0003894!1.75e-22!22;UBERON:0004161!1.75e-22!22;UBERON:0008836!1.75e-22!22;UBERON:0009854!3.97e-21!23;UBERON:0009856!3.97e-21!23;UBERON:0002365!9.47e-19!25;UBERON:0002330!9.47e-19!25;UBERON:0003914!1.35e-11!47;UBERON:0005256!3.31e-11!47;UBERON:0005172!6.37e-08!49;UBERON:0005173!6.37e-08!49;UBERON:0002417!6.37e-08!49;UBERON:0000916!6.37e-08!49;UBERON:0003929!6.71e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.88e-38,22;UBERON:0007499,1.88e-38,22;UBERON:0006925,1.88e-38,22;UBERON:0009497,1.88e-38,22;UBERON:0000015,1.88e-38,22;UBERON:0002423,1.88e-38,22;UBERON:0006235,1.88e-38,22;UBERON:0008835,1.88e-38,22;UBERON:0003894,1.88e-38,22;UBERON:0004161,1.88e-38,22;UBERON:0008836,1.88e-38,22;UBERON:0009854,1.35e-36,23;UBERON:0009856,1.35e-36,23;UBERON:0002365,2.47e-33,25;UBERON:0002330,2.47e-33,25;UBERON:0005256,1.19e-16,45;UBERON:0003914,9.17e-16,47;UBERON:0005172,5.97e-15,49;UBERON:0005173,5.97e-15,49;UBERON:0002417,5.97e-15,49;UBERON:0000916,5.97e-15,49;UBERON:0003929,7.25e-13,55;UBERON:0002368,1.89e-11,60;UBERON:0003104,3.40e-11,61;UBERON:0009142,3.40e-11,61;UBERON:0002530,2.97e-10,65;UBERON:0000490,4.89e-10,66;UBERON:0009569,4.89e-10,66;UBERON:0005911,2.01e-09,69;UBERON:0000949,7.31e-09,72;UBERON:0005177,1.01e-07,79;UBERON:0001041,1.41e-07,80 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,2.89864488701678,19.7897491705719,19.7191686775248,19.4293148989614,5.19821133958135,16.1289679355041,0.702222100658759,0.170430322578058,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0.461230994512117,0,0.587943535678524,0,10.6293836125781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0.592905254174298,0.166845105716094,0.196558995113203,0.449724224769707,3.24576194221605,4.10001171579109,12.4766667372896,15.247895284893,42.6415646418343,1.09824565275233,15.814502718009,8.55924179637558,1.5601883655728,8.5876818502018,3.40855085691633,5.30687873499704,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0.516856586336442,0.727067458955011,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0.991841468704031,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.919217542250071,0.666740183404846,1.44224540067226,0.962757628775446,2.27427490587418,1.01391719956096,0.754505365544305,1.12369808963859,0.89635213366817,0.861532034334199,0.952587382566147,0.927074607558844,1.15745532278223,1.64834360321323,0.147198920134397,0.342869252385415,1.4198064492747,0.715308569841963,1.74415699958794,0.376437521661322,1.69229215783353,1.28049581010941,0.789209134313529,0.543216455383447,1.12228454331548,0.593175090620871,1.18205378850676,0.818462086339379,0.619747364743864,0.771626443924566,0,1.16965804222704,2.57845264857958,0.191288332068843,0,0 | |||
|short_description=p@chr15:3201263..3201268,+ | |||
}} |
Revision as of 10:21, 13 September 2013
Short description: | p@chr15:3201263..3201268, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:3201263..3201268, + |
Coexpression cluster: | MCL_coexpression_mm9:111 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.26e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 1.88e-38 | 22 |
epithelial sac | 1.88e-38 | 22 |
digestive gland | 1.88e-38 | 22 |
epithelium of foregut-midgut junction | 1.88e-38 | 22 |
anatomical boundary | 1.88e-38 | 22 |
hepatobiliary system | 1.88e-38 | 22 |
foregut-midgut junction | 1.88e-38 | 22 |
hepatic diverticulum | 1.88e-38 | 22 |
liver primordium | 1.88e-38 | 22 |
septum transversum | 1.88e-38 | 22 |
liver bud | 1.88e-38 | 22 |
digestive tract diverticulum | 1.35e-36 | 23 |
sac | 1.35e-36 | 23 |
exocrine gland | 2.47e-33 | 25 |
exocrine system | 2.47e-33 | 25 |
trunk mesenchyme | 1.19e-16 | 45 |
epithelial tube | 9.17e-16 | 47 |
abdomen element | 5.97e-15 | 49 |
abdominal segment element | 5.97e-15 | 49 |
abdominal segment of trunk | 5.97e-15 | 49 |
abdomen | 5.97e-15 | 49 |
gut epithelium | 7.25e-13 | 55 |
endocrine gland | 1.89e-11 | 60 |
mesenchyme | 3.40e-11 | 61 |
entire embryonic mesenchyme | 3.40e-11 | 61 |
gland | 2.97e-10 | 65 |
unilaminar epithelium | 4.89e-10 | 66 |
subdivision of trunk | 4.89e-10 | 66 |
endo-epithelium | 2.01e-09 | 69 |
endocrine system | 7.31e-09 | 72 |
trunk region element | 1.01e-07 | 79 |
foregut | 1.41e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.