Personal tools

FFCP PHASE1:Mm9::chr15:36538447..36538475,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=18458|HGNC=|MCL_coexpression_id=773|UniProt=P29341,Q3V2M1|association_with_transcript=252bp_to_ENSMUST00000001809,ENSMUST00000146327,NM_008774,uc007vmx.2,uc007vmy.2_5end|description=CAGE_peak_4_at_Pabpc1_5end|id=chr15:36538447..36538475,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!1.91e-11!193;UBERON:0004120!1.91e-11!193;UBERON:0006603!1.91e-11!193;UBERON:0005156!1.57e-07!26;UBERON:0000990!1.57e-07!26;UBERON:0003133!3.99e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.96e-09,120;UBERON:0004120,1.96e-09,120;UBERON:0006603,1.96e-09,120;UBERON:0005156,1.42e-07,26;UBERON:0000990,1.42e-07,26;UBERON:0001048,1.82e-07,134;UBERON:0003133,3.63e-07,24|phase1_expression=0,0,0.909998478779072,0.30246421130683,1.00179145989269,0.671517087647559,1.40167584357315,1.29123323441576,2.39340827657833,3.5109678948299,1.19852577757853,1.43589886191606,0.856003649656029,1.22388563386596,7.99463428357591,8.30148596298286,9.79386629379405,1.73504190947031,1.7824876368746,0.42438965179803,6.03807360072595,1.58865521921416,1.82839852397255,2.23989391910769,0.45881856213434,0,0.430761996159075,1.07735616342945,0.760093677825496,1.51218077855958,0.665191531965914,1.90509202037889,0,0,1.1554064790051,1.32987716286794,1.02084678131185,1.67412652294763,0,0.523523743973798,1.17646297606203,0.683045484958446,1.45653105909346,8.18329316841252,9.7321853970734,8.62669735159903,4.69434806608824,1.52617609466313,0.659058548203415,0.972149495371417,3.3596741190087,1.43752564364972,0.503347818173209,5.07753499407941,2.68875039313971,1.80081605225163,2.0057340795713,1.03134418455488,0.404632921719196,0,1.26766280701236,2.71075625655306,9.78224275722253,3.5995988691256,3.9554654502679,1.4209602298922,4.49400165777607,3.45796474789399,1.76272340924412,0.945041568321835,1.26194976810829,1.14260393761521,0.220868540951614,1.22490799214954,0.670918297127655,0.919218786610021,0,0.255374676170375,0.46081959976873,1.18697658957174,0.548925861614458,0.52091337055676,0,0,0.30559649555362,2.06240009831567,1.13897344639282,1.3047961207771,0.984440513331393,1.13357340160178,1.44932244350839,0,9.51959867190851,2.15881276655127,1.94932925234301,7.6164570806547,1.82577746171277,1.36344258062446,1.81850203222008,0.35333957451034,0,0,0,0,0.865964164044856,0.760079596425296,2.02209778005913,8.67797485864856,18.125651855302,3.26572705942614,5.37804512975021,5.1759131313064,6.22661842591358,2.11011696773672,7.64326596382081,1.38233250462643,6.67426412882809,9.83275627055399,16.8076004870476,4.85300549842228,11.9254419968613,5.81850303762267,1.86391761218122,0.585561594023094,3.97948742945565,6.89734049063197,2.39630249011841,0.599902730993408,1.39777249780371,0.299581278809645,1.37250180845588,3.26701315493447,0,0.255715457330331,0,0.324482526135515,4.48093200941392,12.3162900903992,2.27450482590307,4.62972082950243,8.06746746368763,0.919608417733892,3.96136685571768,1.80845781402858,4.35433594568498,2.43416068541215,2.06143794031403,1.03481348295606,4.74249584452253,5.10586416453112,4.39877810409872,10.302199424096,2.50242524303038,3.48252166522167,3.2925141825271,4.97585667046233,1.40442637462647,2.05878325691772,1.70498099637356,2.89976081549703,3.04883877975425,2.16074473753218,4.7348947117042,1.57411385397923,2.1597395804233,1.16266972375204,0.804820204198858,3.61972561338225,0.493679549740441,0.820837320395476,2.51313309592153,1.90059983652932,1.09775057645525,3.08674763148855,0,2.98423375899925,1.98251269790279,2.11560453330835,3.19932375802851,1.39342003116263,3.47942145569652,6.05050573870028,2.2237804384487,1.71203063501303,3.32170343081158,1.97638745668813,2.26201687920243,8.15721535368718,1.75467678407208,12.5834717211591,3.8904848977445,3.18626037206988,22.9498160153229,1.94222471436539,3.38123207019241,3.25842124552503,2.71533482034676,9.8190147846446,1.83385957660346,1.03327103585722,1.255989822731,1.60416313098341,0.592905254174298,10.0107063429656,14.7419246334902,12.367416181167,10.7515864335907,9.16473207059184,4.07401362850272,12.083237772934,48.3162975789605,2.74561413188081,10.0637744569148,6.32639611036456,0.312037673114561,2.02063102357689,1.25578189465339,7.23665282045051,2.03228509183265,3.03186258832776,2.93336957595647,1.35796068620151,1.64283173801951,2.68010011906905,4.04674189506223,11.5128852236101,5.35959489961049,6.2010113101657,2.07291199254733,1.14704320301017,1.55416483679306,3.47157740595628,4.52373851817817,3.26343410291226,0.983528546038072,8.55403913544671,0.160550589987792,0.586058432961016,6.06559297893699,2.52470927204373,3.15508219416257,3.51394869866975,4.73931475012158,4.30143836314594,5.56996685205985,3.67999490025482,1.61924280669958,4.09158201075837,2.76701444562566,0.321321316421807,10.0777460497871,8.369083372361,9.77321756121457,7.75359577970917,2.65490276679926,2.6705869977048,2.11626489875326,3.77210159511796,4.72483028609236,0.307435147943927,2.32585463851399,1.45413491791002,1.78248689192361,0.948110273807448,0,1.03135543248187,0.340439605753788,2.34079422240703,3.36332577835162,1.71469628025274,1.24138163549592,2.31879462882692,2.46823530903181,5.48036908406279,14.3149741918863,3.38931313382112,3.74898276693435,6.43056386471772,23.2508774442104,4.52346936961169,5.252383136138,5.41664969158702,7.28702091574627,0.927126510052548,27.6810826892521,13.4151464176095,6.85219751267933,17.3298980444316,22.4178533462481,16.9295848172827,1.35982743995084,1.95932033253121,1.79659965945751,1.90934123603023,9.80641580101519,3.25311147402958,1.62008011232702,2.50905955217362,0.655087691238533,1.75323650300267,6.69492991375221,1.83229159388821,3.11075935900303,11.1841076355647,40.5858915852617,8.07389348637486,2.64733584731356,2.52786544847262,2.19571699912143,2.53434188236167,5.39843297770468,2.47388331203505,8.91304427618542,13.7702948870823,27.3628505944972,12.0084225838708,3.44632865993279,4.72470402958205,8.44485349355668,8.95133478337407,7.3512101269068,6.37035882455835,5.75989155980851,9.79374564497032,9.75447125183998,5.24296162711571,5.36018344068638,5.8689223400601,7.01261413089414,2.49403421976732,13.763129109192,6.6388253891012,13.4307693091263,4.82973985080476,6.00583921443782,11.721703953105,12.862102744744,8.02515366456581,0,0.460325236507177,1.71868654031819,0.171853182343688,0.685082519770642,1.5107877947794,0,0,1.35942722695261,1.03552062350364,2.38710899443606,14.7639203158381,3.24393850932855,5.59145449257076,3.35381060204772,1.10306105070008,1.33348036680969,1.64828045791115,2.24643446714271,1.26348605881899,2.02783439912192,1.32038438970253,1.591905626988,2.30490548657529,1.43588672389033,4.76293691283074,2.78122382267653,0.578727661391115,2.88460130562315,2.06078488188156,2.05721551431249,0.70990322463735,1.1921809497366,2.61623549938191,2.4468438907986,1.52306294205018,1.82927972872773,2.89376682581627,3.12349461845482,1.12228454331548,1.89816028998679,1.47756723563345,0.818462086339379,2.01417893541756,5.98010494041538,7.99393849401427,5.14649538579898,17.1896843238639,15.876931561714,6.17655973534643,4.40548887678801|short_description=p4@Pabpc1}}
|EntrezGene=18458
|HGNC=
|MCL_coexpression_id=773
|UniProt=P29341,Q3V2M1
|association_with_transcript=252bp_to_ENSMUST00000001809,ENSMUST00000146327,NM_008774,uc007vmx.2,uc007vmy.2_5end
|description=CAGE_peak_4_at_Pabpc1_5end
|id=chr15:36538447..36538475,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!1.91e-11!193;UBERON:0004120!1.91e-11!193;UBERON:0006603!1.91e-11!193;UBERON:0005156!1.57e-07!26;UBERON:0000990!1.57e-07!26;UBERON:0003133!3.99e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.96e-09,120;UBERON:0004120,1.96e-09,120;UBERON:0006603,1.96e-09,120;UBERON:0005156,1.42e-07,26;UBERON:0000990,1.42e-07,26;UBERON:0001048,1.82e-07,134;UBERON:0003133,3.63e-07,24
|phase1_expression=0,0,0.909998478779072,0.30246421130683,1.00179145989269,0.671517087647559,1.40167584357315,1.29123323441576,2.39340827657833,3.5109678948299,1.19852577757853,1.43589886191606,0.856003649656029,1.22388563386596,7.99463428357591,8.30148596298286,9.79386629379405,1.73504190947031,1.7824876368746,0.42438965179803,6.03807360072595,1.58865521921416,1.82839852397255,2.23989391910769,0.45881856213434,0,0.430761996159075,1.07735616342945,0.760093677825496,1.51218077855958,0.665191531965914,1.90509202037889,0,0,1.1554064790051,1.32987716286794,1.02084678131185,1.67412652294763,0,0.523523743973798,1.17646297606203,0.683045484958446,1.45653105909346,8.18329316841252,9.7321853970734,8.62669735159903,4.69434806608824,1.52617609466313,0.659058548203415,0.972149495371417,3.3596741190087,1.43752564364972,0.503347818173209,5.07753499407941,2.68875039313971,1.80081605225163,2.0057340795713,1.03134418455488,0.404632921719196,0,1.26766280701236,2.71075625655306,9.78224275722253,3.5995988691256,3.9554654502679,1.4209602298922,4.49400165777607,3.45796474789399,1.76272340924412,0.945041568321835,1.26194976810829,1.14260393761521,0.220868540951614,1.22490799214954,0.670918297127655,0.919218786610021,0,0.255374676170375,0.46081959976873,1.18697658957174,0.548925861614458,0.52091337055676,0,0,0.30559649555362,2.06240009831567,1.13897344639282,1.3047961207771,0.984440513331393,1.13357340160178,1.44932244350839,0,9.51959867190851,2.15881276655127,1.94932925234301,7.6164570806547,1.82577746171277,1.36344258062446,1.81850203222008,0.35333957451034,0,0,0,0,0.865964164044856,0.760079596425296,2.02209778005913,8.67797485864856,18.125651855302,3.26572705942614,5.37804512975021,5.1759131313064,6.22661842591358,2.11011696773672,7.64326596382081,1.38233250462643,6.67426412882809,9.83275627055399,16.8076004870476,4.85300549842228,11.9254419968613,5.81850303762267,1.86391761218122,0.585561594023094,3.97948742945565,6.89734049063197,2.39630249011841,0.599902730993408,1.39777249780371,0.299581278809645,1.37250180845588,3.26701315493447,0,0.255715457330331,0,0.324482526135515,4.48093200941392,12.3162900903992,2.27450482590307,4.62972082950243,8.06746746368763,0.919608417733892,3.96136685571768,1.80845781402858,4.35433594568498,2.43416068541215,2.06143794031403,1.03481348295606,4.74249584452253,5.10586416453112,4.39877810409872,10.302199424096,2.50242524303038,3.48252166522167,3.2925141825271,4.97585667046233,1.40442637462647,2.05878325691772,1.70498099637356,2.89976081549703,3.04883877975425,2.16074473753218,4.7348947117042,1.57411385397923,2.1597395804233,1.16266972375204,0.804820204198858,3.61972561338225,0.493679549740441,0.820837320395476,2.51313309592153,1.90059983652932,1.09775057645525,3.08674763148855,0,2.98423375899925,1.98251269790279,2.11560453330835,3.19932375802851,1.39342003116263,3.47942145569652,6.05050573870028,2.2237804384487,1.71203063501303,3.32170343081158,1.97638745668813,2.26201687920243,8.15721535368718,1.75467678407208,12.5834717211591,3.8904848977445,3.18626037206988,22.9498160153229,1.94222471436539,3.38123207019241,3.25842124552503,2.71533482034676,9.8190147846446,1.83385957660346,1.03327103585722,1.255989822731,1.60416313098341,0.592905254174298,10.0107063429656,14.7419246334902,12.367416181167,10.7515864335907,9.16473207059184,4.07401362850272,12.083237772934,48.3162975789605,2.74561413188081,10.0637744569148,6.32639611036456,0.312037673114561,2.02063102357689,1.25578189465339,7.23665282045051,2.03228509183265,3.03186258832776,2.93336957595647,1.35796068620151,1.64283173801951,2.68010011906905,4.04674189506223,11.5128852236101,5.35959489961049,6.2010113101657,2.07291199254733,1.14704320301017,1.55416483679306,3.47157740595628,4.52373851817817,3.26343410291226,0.983528546038072,8.55403913544671,0.160550589987792,0.586058432961016,6.06559297893699,2.52470927204373,3.15508219416257,3.51394869866975,4.73931475012158,4.30143836314594,5.56996685205985,3.67999490025482,1.61924280669958,4.09158201075837,2.76701444562566,0.321321316421807,10.0777460497871,8.369083372361,9.77321756121457,7.75359577970917,2.65490276679926,2.6705869977048,2.11626489875326,3.77210159511796,4.72483028609236,0.307435147943927,2.32585463851399,1.45413491791002,1.78248689192361,0.948110273807448,0,1.03135543248187,0.340439605753788,2.34079422240703,3.36332577835162,1.71469628025274,1.24138163549592,2.31879462882692,2.46823530903181,5.48036908406279,14.3149741918863,3.38931313382112,3.74898276693435,6.43056386471772,23.2508774442104,4.52346936961169,5.252383136138,5.41664969158702,7.28702091574627,0.927126510052548,27.6810826892521,13.4151464176095,6.85219751267933,17.3298980444316,22.4178533462481,16.9295848172827,1.35982743995084,1.95932033253121,1.79659965945751,1.90934123603023,9.80641580101519,3.25311147402958,1.62008011232702,2.50905955217362,0.655087691238533,1.75323650300267,6.69492991375221,1.83229159388821,3.11075935900303,11.1841076355647,40.5858915852617,8.07389348637486,2.64733584731356,2.52786544847262,2.19571699912143,2.53434188236167,5.39843297770468,2.47388331203505,8.91304427618542,13.7702948870823,27.3628505944972,12.0084225838708,3.44632865993279,4.72470402958205,8.44485349355668,8.95133478337407,7.3512101269068,6.37035882455835,5.75989155980851,9.79374564497032,9.75447125183998,5.24296162711571,5.36018344068638,5.8689223400601,7.01261413089414,2.49403421976732,13.763129109192,6.6388253891012,13.4307693091263,4.82973985080476,6.00583921443782,11.721703953105,12.862102744744,8.02515366456581,0,0.460325236507177,1.71868654031819,0.171853182343688,0.685082519770642,1.5107877947794,0,0,1.35942722695261,1.03552062350364,2.38710899443606,14.7639203158381,3.24393850932855,5.59145449257076,3.35381060204772,1.10306105070008,1.33348036680969,1.64828045791115,2.24643446714271,1.26348605881899,2.02783439912192,1.32038438970253,1.591905626988,2.30490548657529,1.43588672389033,4.76293691283074,2.78122382267653,0.578727661391115,2.88460130562315,2.06078488188156,2.05721551431249,0.70990322463735,1.1921809497366,2.61623549938191,2.4468438907986,1.52306294205018,1.82927972872773,2.89376682581627,3.12349461845482,1.12228454331548,1.89816028998679,1.47756723563345,0.818462086339379,2.01417893541756,5.98010494041538,7.99393849401427,5.14649538579898,17.1896843238639,15.876931561714,6.17655973534643,4.40548887678801
|short_description=p4@Pabpc1
}}

Revision as of 10:25, 13 September 2013

Short description:p4@Pabpc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Pabpc1_5end
Coexpression cluster:MCL_coexpression_mm9:773
Association with transcript: 252bp_to_ENSMUST00000001809, ENSMUST00000146327, NM_008774, uc007vmx.2, uc007vmy.2_5end
EntrezGene:Pabpc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Pabpc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.30
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.73
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.63
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.68
accessory axillary lymph node, adult.CNhs10475.1063-29H918.13
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C55.38
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C17.64
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A86.67
aorta, adult.CNhs10498.46-23H19.83
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F54.85
bone (os femoris), neonate N16.CNhs11225.1525-43A611.93
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H76.90
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.48
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.32
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C68.07
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C64.35
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H25.11
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A810.30
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E33.62
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G12.51
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D83.48
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F28.16
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I922.95
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G79.82
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F810.01
liver, embryo E13.CNhs10524.378-3H614.74
liver, embryo E14.CNhs10594.409-16E112.37
liver, embryo E15.CNhs10520.433-16D710.75
liver, embryo E16.CNhs10523.462-17F59.16
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G412.08
liver, neonate N00.CNhs11117.641-24F448.32
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C611.51
lung, neonate N06.CNhs11212.683-20E55.36
lung, neonate N07.CNhs11111.715-19A36.20
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H23.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H28.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.57
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I710.08
ovary, embryo E18.CNhs11040.505-44H78.37
ovary, neonate N00.CNhs11217.1299-22I49.77
oviduct, adult pregnant day01.CNhs10500.988-6G67.75
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I714.31
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F83.75
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G423.25
skin, neonate N03.CNhs11215.662-22H34.52
skin, neonate N06.CNhs11097.693-20I55.25
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G227.68
spleen, embryo E16.CNhs11035.461-43C113.42
spleen, embryo E18.CNhs11011.1271-21F26.85
spleen, neonate N10.CNhs11116.752-24D117.33
spleen, neonate N20.CNhs11112.824-19H122.42
spleen, neonate N25.CNhs11099.1354-25G316.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E39.81
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A96.69
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I13.11
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G540.59
testis, embryo E13.CNhs11031.389-23F58.07
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B75.40
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D98.91
testis, neonate N20.CNhs11110.839-18H313.77
testis, neonate N30.CNhs11130.1391-42E227.36
thymus, adult.CNhs10471.38-12B512.01
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I24.72
thymus, embryo E16.CNhs11002.456-26C58.44
thymus, embryo E17.CNhs10581.478-18C18.95
thymus, embryo E18.CNhs10595.1273-19G47.35
thymus, neonate N02.CNhs11181.1541-43F86.37
thymus, neonate N03.CNhs11137.2104-43C75.76
thymus, neonate N06.CNhs11197.681-26C49.79
thymus, neonate N07.CNhs11211.713-19D39.75
thymus, neonate N10.CNhs11194.748-24E45.24
thymus, neonate N20.CNhs11186.820-7A25.36
thymus, neonate N25.CNhs11125.1362-25G75.87
thymus, neonate N30.CNhs11132.1393-42G27.01
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.64
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G513.43
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F56.01
uterus, adult.CNhs10509.92-27E511.72
vagina, adult.CNhs10502.89-27D512.86
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C914.76
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I57.99
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C217.19
whole body, neonate N01.CNhs10576.659-23C615.88
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mesoderm1.96e-09120
mesoderm-derived structure1.96e-09120
presumptive mesoderm1.96e-09120
reproductive structure1.42e-0726
reproductive system1.42e-0726
primordium1.82e-07134
reproductive organ3.63e-0724







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:36538447..36538475,-&oldid=2925936"