Personal tools

FFCP PHASE1:Mm9::chr16:18811731..18811736,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=12544|HGNC=|MCL_coexpression_id=49|UniProt=F8WJ72,Q9Z1X9|association_with_transcript=0bp_to_NM_001161623_5end|description=CAGE_peak_3_at_Cdc45_5end|id=chr16:18811731..18811736,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.79e-10,29;UBERON:0005057,1.79e-10,29;UBERON:0002390,6.42e-09,45;UBERON:0003061,6.42e-09,45;UBERON:0001048,7.06e-09,134;UBERON:0003081,9.08e-09,87;UBERON:0002106,5.48e-08,6;UBERON:0004457,5.48e-08,6;UBERON:0000042,5.48e-08,6;UBERON:0004854,5.48e-08,6;UBERON:0009034,5.48e-08,6;UBERON:0002095,5.48e-08,6;UBERON:0004782,5.48e-08,6;UBERON:0003281,5.48e-08,6;UBERON:0009664,5.48e-08,6;UBERON:0002296,5.48e-08,6;UBERON:0005602,5.48e-08,6;UBERON:0001179,5.48e-08,6;UBERON:0006293,5.48e-08,6;UBERON:0002193,6.24e-08,48;UBERON:0002405,6.24e-08,48;UBERON:0000077,1.04e-07,35;UBERON:0000926,1.81e-07,120;UBERON:0004120,1.81e-07,120;UBERON:0006603,1.81e-07,120;UBERON:0001041,5.17e-07,80;UBERON:0003887,9.15e-07,10|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0.0874204024189974,2.33176833270964,2.02475267389826,1.39912375625629,0,0.548457734422955,0,0.255129870453209,1.09220046320974,1.82839852397255,0.319984845586813,0.45881856213434,0,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.443461021310609,2.54012269383853,1.23012957516914,0,0.866554859253824,1.49611180822643,0.612508068787107,0.837063261473815,0.7813353445238,2.09409497589519,0,1.36609096991689,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0,0.514518872071894,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.414758449233911,0.540023753326763,0.630974884054146,0.285650984403804,0,0.979926393719632,1.24599112323707,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0.302904773332736,1.66257432234928,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0,0,0.422530259330042,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0,0.517875767294343,0.148442139064825,1.04091196059682,0.304465478312141,0.230615497256059,0.60289056221049,0.352766121407114,0.376999773989026,0,0,0,1.13236794963186,0.662524555381181,3.39412677194655,0,0,0,1.02182822083437,1.31796636956512,2.99951365496704,0.508280908292259,0,0.457500602818626,0.125654352112864,0,0,0,0,0.611036183101898,1.36847667671102,0,0,2.73252930221678,0.919608417733892,0.540186389416048,1.80845781402858,0.816437989815934,0.768682321709099,0.374806898238915,0,1.94011193639558,0.378212160335639,1.58356011747554,0.876782929710299,1.11218899690239,1.0447564995665,0.205782136407943,0.995171334092466,0,1.28673953557358,1.13665399758237,2.07125772535502,0.469052119962192,1.62055855314913,2.3674473558521,1.57411385397923,1.54267112887378,0.930135779001631,0.536546802799238,0.350296027101508,1.15191894939436,0.656669856316381,0.0810688095458557,0,0.219550115291051,0,0,0.411618449517138,0,0.264450566663544,1.70630600428187,1.62565670302307,0.515469845288373,1.4117846723634,0.667134131534611,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.398282546508734,1.32767530667157,0.685491075658373,3.38123207019241,0.203651327845314,1.16371492300575,0.280543279561274,0.505892296994058,0,0.156998727841375,0.123397163921801,0,2.33583148002532,2.16214894624523,1.57403478669398,1.21716072833102,1.68824011826692,1.78238096246994,1.43848068725405,0.648540907100142,0.823684239564244,2.87536413054709,0,0,0,0.179397413521912,0,0,1.70542270593436,0.977789858652155,1.69745085775188,0.469380496577004,0.670025029767263,0.238043640886014,0,0.472905432318573,0.221464689648775,0.159454768657487,0,0.345369963731791,0,0,0,0.491764273019036,0,0,0,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.668396022247182,0,0.809621403349789,0.584511715822624,0,0,0.141940085208269,1.24645922567079,0.162886959353576,0,0,1.45668381692989,2.11626489875326,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0.712994756769443,0,0,0,0,1.08036656418786,0.388076051348264,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0,0.469343416127421,0,0,0.16488625294148,0.484393280087717,0.72375509913787,0.596861720015682,0.328281799490123,0.291480836629851,0,2.9048049735635,1.65109494370578,1.66675074632741,3.39063222608444,2.32380187125743,1.83022538565218,0.849892149969277,0.139951452323658,0.276399947608848,0,1.26534397432454,1.01659733563424,1.18805874903981,1.25452977608681,0.655087691238533,0.944050424693745,0.247960367176008,0.523511883968059,0.129614973291793,0,1.12738587736838,1.04661582230785,1.98550188548517,0.777804753376191,0.904118764344118,0.844780627453891,1.29092962510329,0.651021924219751,1.25831213310853,0.483168241652012,0.288030006257865,1.58005560314089,1.21635129174099,1.33524244314275,1.55904987573354,1.25318686967237,1.78813219303138,2.52410443991935,1.62458479892035,1.71642964911851,2.13379058634,1.51239277705261,1.46186821109629,2.21287235772758,0.584384510907845,0,0.887943813496259,1.34570784914214,1.00730769818447,0,0.187682475451182,0,0.643105137237198,1.00314420807073,0,0,0,0,0,0,0,0,0,0,1.14166082342594,0.399024873401031,0.682934423016537,1.45864030240976,0.838452650511929,0.183843508450014,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.448176066834085,0.402048282689293,0,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0.290692833264657,0.376437521661322,0.169229215783353,0.365855945745545,0.263069711437843,0.543216455383447,1.12228454331548,0.593175090620871,0.591026894253381,0.409231043169689,0.154936841185966,0.964533054905707,0.249810577937946,0.467863216890817,0,0.57386499620653,0.441182838239031,0.463735671240843|short_description=p3@Cdc45}}
|EntrezGene=12544
|HGNC=
|MCL_coexpression_id=49
|UniProt=F8WJ72,Q9Z1X9
|association_with_transcript=0bp_to_NM_001161623_5end
|description=CAGE_peak_3_at_Cdc45_5end
|id=chr16:18811731..18811736,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.79e-10,29;UBERON:0005057,1.79e-10,29;UBERON:0002390,6.42e-09,45;UBERON:0003061,6.42e-09,45;UBERON:0001048,7.06e-09,134;UBERON:0003081,9.08e-09,87;UBERON:0002106,5.48e-08,6;UBERON:0004457,5.48e-08,6;UBERON:0000042,5.48e-08,6;UBERON:0004854,5.48e-08,6;UBERON:0009034,5.48e-08,6;UBERON:0002095,5.48e-08,6;UBERON:0004782,5.48e-08,6;UBERON:0003281,5.48e-08,6;UBERON:0009664,5.48e-08,6;UBERON:0002296,5.48e-08,6;UBERON:0005602,5.48e-08,6;UBERON:0001179,5.48e-08,6;UBERON:0006293,5.48e-08,6;UBERON:0002193,6.24e-08,48;UBERON:0002405,6.24e-08,48;UBERON:0000077,1.04e-07,35;UBERON:0000926,1.81e-07,120;UBERON:0004120,1.81e-07,120;UBERON:0006603,1.81e-07,120;UBERON:0001041,5.17e-07,80;UBERON:0003887,9.15e-07,10
|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0.0874204024189974,2.33176833270964,2.02475267389826,1.39912375625629,0,0.548457734422955,0,0.255129870453209,1.09220046320974,1.82839852397255,0.319984845586813,0.45881856213434,0,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.443461021310609,2.54012269383853,1.23012957516914,0,0.866554859253824,1.49611180822643,0.612508068787107,0.837063261473815,0.7813353445238,2.09409497589519,0,1.36609096991689,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0,0.514518872071894,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.414758449233911,0.540023753326763,0.630974884054146,0.285650984403804,0,0.979926393719632,1.24599112323707,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0.302904773332736,1.66257432234928,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0,0,0.422530259330042,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0,0.517875767294343,0.148442139064825,1.04091196059682,0.304465478312141,0.230615497256059,0.60289056221049,0.352766121407114,0.376999773989026,0,0,0,1.13236794963186,0.662524555381181,3.39412677194655,0,0,0,1.02182822083437,1.31796636956512,2.99951365496704,0.508280908292259,0,0.457500602818626,0.125654352112864,0,0,0,0,0.611036183101898,1.36847667671102,0,0,2.73252930221678,0.919608417733892,0.540186389416048,1.80845781402858,0.816437989815934,0.768682321709099,0.374806898238915,0,1.94011193639558,0.378212160335639,1.58356011747554,0.876782929710299,1.11218899690239,1.0447564995665,0.205782136407943,0.995171334092466,0,1.28673953557358,1.13665399758237,2.07125772535502,0.469052119962192,1.62055855314913,2.3674473558521,1.57411385397923,1.54267112887378,0.930135779001631,0.536546802799238,0.350296027101508,1.15191894939436,0.656669856316381,0.0810688095458557,0,0.219550115291051,0,0,0.411618449517138,0,0.264450566663544,1.70630600428187,1.62565670302307,0.515469845288373,1.4117846723634,0.667134131534611,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.398282546508734,1.32767530667157,0.685491075658373,3.38123207019241,0.203651327845314,1.16371492300575,0.280543279561274,0.505892296994058,0,0.156998727841375,0.123397163921801,0,2.33583148002532,2.16214894624523,1.57403478669398,1.21716072833102,1.68824011826692,1.78238096246994,1.43848068725405,0.648540907100142,0.823684239564244,2.87536413054709,0,0,0,0.179397413521912,0,0,1.70542270593436,0.977789858652155,1.69745085775188,0.469380496577004,0.670025029767263,0.238043640886014,0,0.472905432318573,0.221464689648775,0.159454768657487,0,0.345369963731791,0,0,0,0.491764273019036,0,0,0,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.668396022247182,0,0.809621403349789,0.584511715822624,0,0,0.141940085208269,1.24645922567079,0.162886959353576,0,0,1.45668381692989,2.11626489875326,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0.712994756769443,0,0,0,0,1.08036656418786,0.388076051348264,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0,0.469343416127421,0,0,0.16488625294148,0.484393280087717,0.72375509913787,0.596861720015682,0.328281799490123,0.291480836629851,0,2.9048049735635,1.65109494370578,1.66675074632741,3.39063222608444,2.32380187125743,1.83022538565218,0.849892149969277,0.139951452323658,0.276399947608848,0,1.26534397432454,1.01659733563424,1.18805874903981,1.25452977608681,0.655087691238533,0.944050424693745,0.247960367176008,0.523511883968059,0.129614973291793,0,1.12738587736838,1.04661582230785,1.98550188548517,0.777804753376191,0.904118764344118,0.844780627453891,1.29092962510329,0.651021924219751,1.25831213310853,0.483168241652012,0.288030006257865,1.58005560314089,1.21635129174099,1.33524244314275,1.55904987573354,1.25318686967237,1.78813219303138,2.52410443991935,1.62458479892035,1.71642964911851,2.13379058634,1.51239277705261,1.46186821109629,2.21287235772758,0.584384510907845,0,0.887943813496259,1.34570784914214,1.00730769818447,0,0.187682475451182,0,0.643105137237198,1.00314420807073,0,0,0,0,0,0,0,0,0,0,1.14166082342594,0.399024873401031,0.682934423016537,1.45864030240976,0.838452650511929,0.183843508450014,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.448176066834085,0.402048282689293,0,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0.290692833264657,0.376437521661322,0.169229215783353,0.365855945745545,0.263069711437843,0.543216455383447,1.12228454331548,0.593175090620871,0.591026894253381,0.409231043169689,0.154936841185966,0.964533054905707,0.249810577937946,0.467863216890817,0,0.57386499620653,0.441182838239031,0.463735671240843
|short_description=p3@Cdc45
}}

Revision as of 12:07, 13 September 2013

Short description:p3@Cdc45
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cdc45_5end
Coexpression cluster:MCL_coexpression_mm9:49
Association with transcript: 0bp_to_NM_001161623_5end
EntrezGene:Cdc45
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cdc45

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F82.52
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E41.51
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G72.21
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:18811731..18811736,-&oldid=2933414"