FFCP PHASE1:Mm9::chr17:24664841..24664852,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=224619|HGNC=|UniProt=F8WJF7,Q8C2K8,Q922B6|association_with_transcript=30bp_to_NM_001172113,NM_001172114,NM_153792,uc008awq.2,uc008awr.2,uc008aws.2,uc012aml.1_5end|description=CAGE_peak_5_at_Traf7_5end|id=chr17:24664841..24664852,-|ontology_enrichment_celltype=CL:0002371!2.58e-07!118;CL:0000144!4.63e-07!121;CL:0000012!4.63e-07!121|ontology_enrichment_celltype_v019_2=CL:0000473,1.11e-09,7;CL:0000066,2.20e-08,25;CL:0000682,8.53e-07,3;CL:0002076,9.89e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.320297694209588,2.79180326111489,1.81999695755814,1.81478526784098,1.50268718983904,0.671517087647559,0.467225281191051,0.645616617207881,0.281577444303333,1.17032263160997,0.513653904676515,0.558405112967355,0,0.611942816932982,0.666219523631325,0.607425802169478,0,0.157731082679119,0,0,0.850432901510698,0.695036658406197,0,1.75991665072747,1.37645568640302,3.44539178469012,2.15380998079537,1.72376986148711,0.380046838912748,0.504060259519861,0.886922042621219,6.35030673459631,7.99584223859941,0,0.288851619751275,0.332469290716985,0.408338712524738,0.837063261473815,0.7813353445238,0.523523743973798,1.17646297606203,1.36609096991689,0,0.755380907853464,1.11514624341466,0.550640256485045,0.782391344348039,1.52617609466313,2.85592037554813,0.777719596297134,0.279972843250725,2.87505128729943,0,0,0,1.28629718017973,0.573066879877513,1.03134418455488,0.606949382578793,0.528990979272033,0,1.69422266034566,1.77858959222228,0.449949858640699,0,0,0.299600110518405,1.15265491596466,0.311068836925433,0,0.210324961351382,0.856952953211411,0.441737081903227,0.367472397644862,0.383381884072945,0,1.10115880999389,0.255374676170375,0.307213066512487,0.527545150920775,0.548925861614458,0,0,1.12552522006336,0.15279824777681,0.294628585473668,0.569486723196412,0.186399445825301,1.13589289999776,0.68014404096107,0,0,1.3599426674155,0,0,0.448026887097336,0.421333260395256,1.02258193546835,1.81850203222008,0.70667914902068,0.14084341977668,0,0,7.11066703153331,1.08245520505607,1.52015919285059,1.01104889002957,0.22836775943812,0,0.148442139064825,0.520455980298408,0,0.461230994512117,0.452167921657868,0.23517741427141,0,1.23597483867187,0.289198713839823,0,0.161766849947409,0.441683036920787,0,0,0,0.209446706813455,0.510914110417183,0,0,0.254140454146129,0,1.37250180845588,0.753926112677186,0.521472960576829,0.255715457330331,0,0.162241263067758,0.101839363850316,0.124406970610093,0.758168275301024,0.420883711772948,0,0.229902104433473,0,0.452114453507145,0.408218994907967,0,0,0.258703370739016,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.411564272815887,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0.469052119962192,0.180062061461015,0.473489471170421,0.590292695242212,0,0,1.07309360559848,0,0,0,0.162137619091711,0.146199987425332,0.439100230582101,0,0.210289948564127,0.617427674275707,0.660837565967596,3.96675849995316,0.426576501070468,0.696710015581316,0.257734922644187,0.403367049246685,0.444756087689741,0.570676878337677,0.474529061544512,0.494096864172033,0,0.397912944082302,0.19496408711912,0,0,0.398282546508734,0.758671603812327,0.342745537829186,0,0.203651327845314,0.193952487167626,0.420814919341911,0,0.590440591918409,0.627994911365499,0.123397163921801,0,0.667380422864376,0.393117990226406,0.449724224769707,1.01430060694251,0.482354319504834,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,1.86070473834252,0,0,0,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0.469380496577004,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.144649058581512,3.01582567878545,1.63171705145613,0,0,0.160550589987792,0.586058432961016,4.91804836130026,0.252470927204373,0.315508219416257,0.780877488593277,0.861693590931196,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,1.16902343164525,0.395287777946524,0,0.283880170416537,0.534196811001766,0,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0,0,0,0,0,1.40803024838226,1.48282449604674,0.220528398054962,0.49465875882444,0.161464426695906,0.422190474497091,0.119372344003136,0.656563598980245,0.291480836629851,0.370850604021019,0.170870880797853,0.412773735926445,0.370389054739423,0,0.410082683163076,0.228778173206523,0.509935289981566,0.279902904647316,0,0,0.632671987162271,0.406638934253697,0.324016022465404,0.418176592028937,0,0.134864346384821,0.165306911450672,0.523511883968059,0.129614973291793,0,0.56369293868419,0.448549638131936,0.330916980914195,0.194451188344048,0.129159823477731,0.675824501963113,0.58678619322877,0.39061315453185,0.419437377702843,1.20792060413003,0.864090018773596,0.948033361884535,0.202725215290164,0.718976700153791,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.29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| ||
|EntrezGene=224619 | |||
|HGNC= | |||
|UniProt=F8WJF7,Q8C2K8,Q922B6 | |||
|association_with_transcript=30bp_to_NM_001172113,NM_001172114,NM_153792,uc008awq.2,uc008awr.2,uc008aws.2,uc012aml.1_5end | |||
|description=CAGE_peak_5_at_Traf7_5end | |||
|id=chr17:24664841..24664852,- | |||
|ontology_enrichment_celltype=CL:0002371!2.58e-07!118;CL:0000144!4.63e-07!121;CL:0000012!4.63e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.11e-09,7;CL:0000066,2.20e-08,25;CL:0000682,8.53e-07,3;CL:0002076,9.89e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.320297694209588,2.79180326111489,1.81999695755814,1.81478526784098,1.50268718983904,0.671517087647559,0.467225281191051,0.645616617207881,0.281577444303333,1.17032263160997,0.513653904676515,0.558405112967355,0,0.611942816932982,0.666219523631325,0.607425802169478,0,0.157731082679119,0,0,0.850432901510698,0.695036658406197,0,1.75991665072747,1.37645568640302,3.44539178469012,2.15380998079537,1.72376986148711,0.380046838912748,0.504060259519861,0.886922042621219,6.35030673459631,7.99584223859941,0,0.288851619751275,0.332469290716985,0.408338712524738,0.837063261473815,0.7813353445238,0.523523743973798,1.17646297606203,1.36609096991689,0,0.755380907853464,1.11514624341466,0.550640256485045,0.782391344348039,1.52617609466313,2.85592037554813,0.777719596297134,0.279972843250725,2.87505128729943,0,0,0,1.28629718017973,0.573066879877513,1.03134418455488,0.606949382578793,0.528990979272033,0,1.69422266034566,1.77858959222228,0.449949858640699,0,0,0.299600110518405,1.15265491596466,0.311068836925433,0,0.210324961351382,0.856952953211411,0.441737081903227,0.367472397644862,0.383381884072945,0,1.10115880999389,0.255374676170375,0.307213066512487,0.527545150920775,0.548925861614458,0,0,1.12552522006336,0.15279824777681,0.294628585473668,0.569486723196412,0.186399445825301,1.13589289999776,0.68014404096107,0,0,1.3599426674155,0,0,0.448026887097336,0.421333260395256,1.02258193546835,1.81850203222008,0.70667914902068,0.14084341977668,0,0,7.11066703153331,1.08245520505607,1.52015919285059,1.01104889002957,0.22836775943812,0,0.148442139064825,0.520455980298408,0,0.461230994512117,0.452167921657868,0.23517741427141,0,1.23597483867187,0.289198713839823,0,0.161766849947409,0.441683036920787,0,0,0,0.209446706813455,0.510914110417183,0,0,0.254140454146129,0,1.37250180845588,0.753926112677186,0.521472960576829,0.255715457330331,0,0.162241263067758,0.101839363850316,0.124406970610093,0.758168275301024,0.420883711772948,0,0.229902104433473,0,0.452114453507145,0.408218994907967,0,0,0.258703370739016,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.411564272815887,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0.469052119962192,0.180062061461015,0.473489471170421,0.590292695242212,0,0,1.07309360559848,0,0,0,0.162137619091711,0.146199987425332,0.439100230582101,0,0.210289948564127,0.617427674275707,0.660837565967596,3.96675849995316,0.426576501070468,0.696710015581316,0.257734922644187,0.403367049246685,0.444756087689741,0.570676878337677,0.474529061544512,0.494096864172033,0,0.397912944082302,0.19496408711912,0,0,0.398282546508734,0.758671603812327,0.342745537829186,0,0.203651327845314,0.193952487167626,0.420814919341911,0,0.590440591918409,0.627994911365499,0.123397163921801,0,0.667380422864376,0.393117990226406,0.449724224769707,1.01430060694251,0.482354319504834,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,1.86070473834252,0,0,0,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0.469380496577004,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.144649058581512,3.01582567878545,1.63171705145613,0,0,0.160550589987792,0.586058432961016,4.91804836130026,0.252470927204373,0.315508219416257,0.780877488593277,0.861693590931196,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,1.16902343164525,0.395287777946524,0,0.283880170416537,0.534196811001766,0,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0,0,0,0,0,1.40803024838226,1.48282449604674,0.220528398054962,0.49465875882444,0.161464426695906,0.422190474497091,0.119372344003136,0.656563598980245,0.291480836629851,0.370850604021019,0.170870880797853,0.412773735926445,0.370389054739423,0,0.410082683163076,0.228778173206523,0.509935289981566,0.279902904647316,0,0,0.632671987162271,0.406638934253697,0.324016022465404,0.418176592028937,0,0.134864346384821,0.165306911450672,0.523511883968059,0.129614973291793,0,0.56369293868419,0.448549638131936,0.330916980914195,0.194451188344048,0.129159823477731,0.675824501963113,0.58678619322877,0.39061315453185,0.419437377702843,1.20792060413003,0.864090018773596,0.948033361884535,0.202725215290164,0.718976700153791,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0.100966449948148,0.228620419965,0.403304740547362,0.0974578807397524,0.192423683280659,0.701261413089414,0,2.44184548711471,4.21655126064536,1.34307693091263,0.19318959403219,0,0,0.428736758158132,0,0,0.460325236507177,0,0.171853182343688,1.37016503954128,0,0,0.45032120322422,0,1.03552062350364,0.415149390336707,0.798049746802062,0.341467211508268,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0,0.758091635291392,0.25347929989024,0.188626341386076,0.468207537349412,0.320125762024346,0.459483751644906,0.476293691283074,0.115884325944855,0,0.412085900803307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| |||
|short_description=p5@Traf7 | |||
}} | |||
Revision as of 13:42, 13 September 2013
| Short description: | p5@Traf7 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Traf7_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 30bp_to_NM_001172113, NM_001172114, NM_153792, uc008awq.2, uc008awr.2, uc008aws.2, uc012aml.1_5end |
| EntrezGene: | Traf7 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| defensive cell | 1.11e-09 | 7 |
| epithelial cell | 2.20e-08 | 25 |
| M cell of gut | 8.53e-07 | 3 |
| endo-epithelial cell | 9.89e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
