FFCP PHASE1:Mm9::chr19:41338509..41338544,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=107358|HGNC=|UniProt=Q9ET30,Q571B0|association_with_transcript=-15bp_to_ENSMUST00000025989,NM_133352,uc008hls.1,uc008hlt.1_5end|description=CAGE_peak_2_at_Tm9sf3_5end|id=chr19:41338509..41338544,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.13e-11!43;UBERON:0000344!5.26e-08!15;UBERON:0002108!9.56e-08!16;UBERON:0001242!1.75e-07!13;UBERON:0000060!1.75e-07!13;UBERON:0001262!1.75e-07!13;UBERON:0004786!1.75e-07!13;UBERON:0005409!2.40e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.26e-08,15;UBERON:0001242,1.75e-07,13;UBERON:0001262,1.75e-07,13;UBERON:0004786,1.75e-07,13|phase1_expression=35.7131929043691,30.7098358722638,33.6699437148257,28.7341000741489,41.5743455855468,33.7437336542898,22.4268134971705,9.42600261123507,4.50523910885334,4.21316147379588,4.10923123741212,3.90883579077148,14.0384598543589,11.7143339241457,14.6568295198892,10.5287139042709,6.29605690315332,14.1957974411207,16.0423887318714,16.5511964201232,26.7035931074359,17.8723712161594,21.6795824985316,22.7189240366637,28.6761601333963,32.7312219545562,41.7839136274303,28.6576739472232,32.1139578881272,46.3735438758273,30.3770799597767,0,2.46025915033828,0,30.6182716936351,32.083286554189,25.3170001765338,23.4377713212668,15.626706890476,22.5115209908733,20.5881020810855,23.9065919735456,23.7900072985265,12.7155786155333,14.192770370732,23.8610777810186,8.60630478782843,12.4274339136855,12.5221124158649,14.9711022287198,12.3188051030319,12.9377307928474,14.4293041209653,12.3311564141929,11.0910953717013,16.4646039063006,18.9112070359579,18.5641953219879,16.9945827122062,10.0508286061686,20.2826049121977,12.876092218627,8.89294796111139,8.54904731417329,6.92206453796882,4.9733608046227,6.2916023208865,8.83702102239575,16.1755795201225,11.7455166348571,14.5124223332454,21.1381728458815,17.4486147351775,15.6788222995141,13.6100568845896,11.9498442259303,11.0115880999389,30.3895864642747,27.9563890526363,16.4857859662742,20.1272815925301,18.7528813400434,21.7762739221077,19.1339287410771,25.0589126353969,22.6864010814724,30.6099113718071,26.655120753018,23.5508461266202,20.782179029366,15.0729534124872,18.9293252935905,8.15965600449301,25.9057531986152,24.6915038630114,28.6737207742295,19.3813299781818,23.68981483835,16.8860902991865,17.666978725517,37.041819401267,19.2489716121477,66.2493623237279,156.434674693733,13.2059535016841,10.387754484479,10.6160133453104,27.6324988920125,16.3130866697718,14.6957717674177,13.5318554877586,10.3518262626128,15.2206228188999,17.0316583824463,19.6373140916627,27.2696503185396,22.2475470960936,16.7735254027098,9.73071607144862,29.2797998404811,19.2132121060542,17.455509112868,24.2309289583559,13.7606974595427,15.0801628905688,24.0129631896076,20.967646788536,24.5960119707297,19.0605340609597,19.7723644014366,18.3000241127451,20.356005042284,19.9897968221118,24.2929684463814,18.4931359658008,21.0913641988085,33.0977932513528,19.6563013563947,26.5358896355358,26.7261156975822,17.1758984710769,18.8519725635448,22.147641966058,18.2352829581215,22.7241907165435,17.6796933993093,22.8632207925738,13.7112786491678,11.6406716183735,17.2086532952716,14.6039433056078,19.5084201860542,10.5657954705727,19.8503734917635,15.4336602305958,19.5053581482123,21.7686088067103,20.0731367549478,18.7547909601091,22.3695834338342,12.195355119017,17.8261440846405,20.8335367314985,19.0861304794982,18.9748548851475,16.2773761325285,17.9743178937745,27.9069168257535,20.7345410890985,20.685100473966,19.8618583387347,19.1521983527185,14.4903076092093,15.5679445762031,19.5569652164638,22.3303008863047,27.0943402046714,25.3872543997003,15.5700422890721,11.8440702648824,21.3919985794675,18.5548842653475,17.3454874198999,17.690983228468,26.5736274464927,19.7638745668813,21.3634927480229,24.2726895890204,20.6661932346267,19.7740269903929,21.8299430373441,25.490082976559,9.48339504765408,18.8510045806053,12.3978509240388,19.9578301288408,19.9771061782655,33.1041069882304,31.3653224136316,32.7694528514717,27.3177786443992,27.0239788988743,20.7516838961004,11.8460025058427,12.1866576970186,11.4679677316275,11.3601667977562,11.576503668116,13.4951701444152,13.5217184601881,20.2669033468794,15.1008777253445,18.6898668485561,18.6070473834252,21.5305994449047,17.4279425783507,22.2452792767171,26.5343936749852,22.5398892003258,20.8440552947533,18.578007314391,16.2955282344181,13.6120344007331,22.1108259823197,22.1380586023993,33.1727201358258,18.4433118604243,21.7035395855799,27.2667654404303,17.0417847304368,21.2402527695052,26.4707777204166,7.53956419696361,9.79030230873677,30.4893849271802,31.4567890787395,17.8211154886449,26.6070528564301,19.5082584998244,24.2372090116198,16.4064274096453,10.9322848403059,15.2950612390287,16.7278158566786,17.3782965784267,18.1168979704853,12.5491317519217,18.704374906324,22.5314033429518,18.6366363524648,18.4522110770749,14.9575107080494,34.0433745048974,20.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| ||
|EntrezGene=107358 | |||
|HGNC= | |||
|UniProt=Q9ET30,Q571B0 | |||
|association_with_transcript=-15bp_to_ENSMUST00000025989,NM_133352,uc008hls.1,uc008hlt.1_5end | |||
|description=CAGE_peak_2_at_Tm9sf3_5end | |||
|id=chr19:41338509..41338544,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.13e-11!43;UBERON:0000344!5.26e-08!15;UBERON:0002108!9.56e-08!16;UBERON:0001242!1.75e-07!13;UBERON:0000060!1.75e-07!13;UBERON:0001262!1.75e-07!13;UBERON:0004786!1.75e-07!13;UBERON:0005409!2.40e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.26e-08,15;UBERON:0001242,1.75e-07,13;UBERON:0001262,1.75e-07,13;UBERON:0004786,1.75e-07,13 | |||
|phase1_expression=35.7131929043691,30.7098358722638,33.6699437148257,28.7341000741489,41.5743455855468,33.7437336542898,22.4268134971705,9.42600261123507,4.50523910885334,4.21316147379588,4.10923123741212,3.90883579077148,14.0384598543589,11.7143339241457,14.6568295198892,10.5287139042709,6.29605690315332,14.1957974411207,16.0423887318714,16.5511964201232,26.7035931074359,17.8723712161594,21.6795824985316,22.7189240366637,28.6761601333963,32.7312219545562,41.7839136274303,28.6576739472232,32.1139578881272,46.3735438758273,30.3770799597767,0,2.46025915033828,0,30.6182716936351,32.083286554189,25.3170001765338,23.4377713212668,15.626706890476,22.5115209908733,20.5881020810855,23.9065919735456,23.7900072985265,12.7155786155333,14.192770370732,23.8610777810186,8.60630478782843,12.4274339136855,12.5221124158649,14.9711022287198,12.3188051030319,12.9377307928474,14.4293041209653,12.3311564141929,11.0910953717013,16.4646039063006,18.9112070359579,18.5641953219879,16.9945827122062,10.0508286061686,20.2826049121977,12.876092218627,8.89294796111139,8.54904731417329,6.92206453796882,4.9733608046227,6.2916023208865,8.83702102239575,16.1755795201225,11.7455166348571,14.5124223332454,21.1381728458815,17.4486147351775,15.6788222995141,13.6100568845896,11.9498442259303,11.0115880999389,30.3895864642747,27.9563890526363,16.4857859662742,20.1272815925301,18.7528813400434,21.7762739221077,19.1339287410771,25.0589126353969,22.6864010814724,30.6099113718071,26.655120753018,23.5508461266202,20.782179029366,15.0729534124872,18.9293252935905,8.15965600449301,25.9057531986152,24.6915038630114,28.6737207742295,19.3813299781818,23.68981483835,16.8860902991865,17.666978725517,37.041819401267,19.2489716121477,66.2493623237279,156.434674693733,13.2059535016841,10.387754484479,10.6160133453104,27.6324988920125,16.3130866697718,14.6957717674177,13.5318554877586,10.3518262626128,15.2206228188999,17.0316583824463,19.6373140916627,27.2696503185396,22.2475470960936,16.7735254027098,9.73071607144862,29.2797998404811,19.2132121060542,17.455509112868,24.2309289583559,13.7606974595427,15.0801628905688,24.0129631896076,20.967646788536,24.5960119707297,19.0605340609597,19.7723644014366,18.3000241127451,20.356005042284,19.9897968221118,24.2929684463814,18.4931359658008,21.0913641988085,33.0977932513528,19.6563013563947,26.5358896355358,26.7261156975822,17.1758984710769,18.8519725635448,22.147641966058,18.2352829581215,22.7241907165435,17.6796933993093,22.8632207925738,13.7112786491678,11.6406716183735,17.2086532952716,14.6039433056078,19.5084201860542,10.5657954705727,19.8503734917635,15.4336602305958,19.5053581482123,21.7686088067103,20.0731367549478,18.7547909601091,22.3695834338342,12.195355119017,17.8261440846405,20.8335367314985,19.0861304794982,18.9748548851475,16.2773761325285,17.9743178937745,27.9069168257535,20.7345410890985,20.685100473966,19.8618583387347,19.1521983527185,14.4903076092093,15.5679445762031,19.5569652164638,22.3303008863047,27.0943402046714,25.3872543997003,15.5700422890721,11.8440702648824,21.3919985794675,18.5548842653475,17.3454874198999,17.690983228468,26.5736274464927,19.7638745668813,21.3634927480229,24.2726895890204,20.6661932346267,19.7740269903929,21.8299430373441,25.490082976559,9.48339504765408,18.8510045806053,12.3978509240388,19.9578301288408,19.9771061782655,33.1041069882304,31.3653224136316,32.7694528514717,27.3177786443992,27.0239788988743,20.7516838961004,11.8460025058427,12.1866576970186,11.4679677316275,11.3601667977562,11.576503668116,13.4951701444152,13.5217184601881,20.2669033468794,15.1008777253445,18.6898668485561,18.6070473834252,21.5305994449047,17.4279425783507,22.2452792767171,26.5343936749852,22.5398892003258,20.8440552947533,18.578007314391,16.2955282344181,13.6120344007331,22.1108259823197,22.1380586023993,33.1727201358258,18.4433118604243,21.7035395855799,27.2667654404303,17.0417847304368,21.2402527695052,26.4707777204166,7.53956419696361,9.79030230873677,30.4893849271802,31.4567890787395,17.8211154886449,26.6070528564301,19.5082584998244,24.2372090116198,16.4064274096453,10.9322848403059,15.2950612390287,16.7278158566786,17.3782965784267,18.1168979704853,12.5491317519217,18.704374906324,22.5314033429518,18.6366363524648,18.4522110770749,14.9575107080494,34.0433745048974,20.2913251256219,43.8058956521877,16.7518638946937,18.7440605318146,28.1021568836288,26.2818684663888,29.821209350561,33.854106405037,34.1721705708855,43.1361827845513,37.2923374364263,50.6009321159994,45.3796390292022,24.5116516142727,20.5269647195694,10.4780533864031,19.2903331528433,23.2315706071378,20.334045206636,29.2897256671775,17.0500371504176,14.0803024838226,23.0896957241564,25.3607657763206,24.8978241941635,18.4069446433332,22.6173468480584,16.7121281604391,17.0706535734864,25.358832786797,20.9530591271876,13.8405413446261,17.1301100409475,14.0747840800981,10.1718966782533,10.3887613067979,10.9813523139131,15.8079939894285,16.6542228265153,12.8525975638114,18.1387417422872,13.2861117304077,23.9916971209681,19.0089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| |||
|short_description=p2@Tm9sf3 | |||
}} | |||
Revision as of 17:37, 13 September 2013
| Short description: | p2@Tm9sf3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Tm9sf3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -15bp_to_ENSMUST00000025989, NM_133352, uc008hls.1, uc008hlt.1_5end |
| EntrezGene: | Tm9sf3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mucosa | 5.26e-08 | 15 |
| intestinal mucosa | 1.75e-07 | 13 |
| wall of intestine | 1.75e-07 | 13 |
| gastrointestinal system mucosa | 1.75e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
