Personal tools

FFCP PHASE1:Mm9::chr1:135320962..135320981,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=20668|HGNC=|UniProt=Q04891|association_with_transcript=-8bp_to_ENSMUST00000153799_5end|description=CAGE_peak_2_at_Sox13_5end|id=chr1:135320962..135320981,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.98e-14!43;UBERON:0005409!7.33e-14!59;UBERON:0001007!3.00e-07!128;UBERON:0001555!3.00e-07!128;UBERON:0007026!3.00e-07!128;UBERON:0004921!4.33e-07!126;UBERON:0004185!4.33e-07!126;UBERON:0004119!4.61e-07!130;UBERON:0000925!4.61e-07!130;UBERON:0006595!4.61e-07!130;UBERON:0001242!8.73e-07!13;UBERON:0000060!8.73e-07!13;UBERON:0001262!8.73e-07!13;UBERON:0004786!8.73e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.43e-14,31;UBERON:0005409,2.34e-12,47;UBERON:0001242,7.10e-07,13;UBERON:0001262,7.10e-07,13;UBERON:0004786,7.10e-07,13|phase1_expression=5.76535849577258,29.6629096493457,22.2949627300873,13.6108895088074,22.0394121176393,4.36486106970913,5.13947809310157,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,5.3577272795174,0,0,2.07990149631429,4.12936705920906,20.6723507081407,10.7690499039769,7.54149314400612,10.0712412311878,10.0812051903972,6.65191531965914,0,0,0,3.75507105676657,2.65975432573588,3.26670970019791,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0.782391344348039,0,0.439372365468944,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0,0.286533439938757,0,0.809265843438391,0.528990979272033,1.26766280701236,0,0,0,0,0,2.39680088414724,0.768436610643109,0.829516898467821,1.4850653216486,1.26194976810829,1.99955689082663,0.883474163806454,0.979926393719632,0.958454710182364,0.919218786610021,4.40463523997555,2.042997409363,2.15049146558741,2.76961204233407,2.19570344645783,1.56274011167028,1.95428099300967,0,1.06958773443767,2.35702868378934,1.56608848879013,2.05039390407831,5.37655972665607,8.38844317185319,2.89864488701678,0,0.679971333707751,0,0.649776417447669,0,2.10666630197628,0,0,0.35333957451034,15.0702459161048,0,0,0,1.29894624606728,1.52015919285059,1.51657333504435,3.88225191044804,0,2.07818994690755,3.29622120855658,1.21786191324856,2.7673859670727,2.56228488939458,2.58695155698551,2.13633205260448,3.70792451601561,2.60278842455841,0.884610551949874,2.10296904931632,1.76673214768315,0.969750506270444,1.86391761218122,0.292780797011547,0.628340120440365,12.0064815948038,0,0,0.127070227073065,1.04853447583376,1.37250180845588,1.25654352112864,1.21677024134594,1.02286182932132,2.0778804455956,1.78465389374533,6.00852246716866,2.98576729464223,3.53811861807145,2.73574412652416,4.29397461776922,3.44853156650209,2.34080768746954,3.76762044589288,6.12328492361951,5.89323113310309,5.24729657534481,4.39795730256327,2.37124792226126,1.32374256117473,1.58356011747554,1.53437012699302,2.22437799380478,1.74126083261083,1.23469281844766,3.38358253591438,0,0,0,1.44988040774851,0.703578179943289,1.80062061461015,1.65721314909647,1.96764231747404,2.1597395804233,3.25547522650571,2.95100741539581,3.26942958628075,2.79751744852917,3.447516745661,4.29664690593035,4.23979963533464,2.63460138349261,4.96563749413376,1.26173969138476,1.02904612379284,14.8688452342709,5.81791246659797,2.77274725695804,3.71578674976702,3.99489130098489,6.25218926332362,6.0042071838115,5.89699440948933,9.01605216934572,6.58795818896044,10.8074139784116,7.16243299348143,8.77338392036041,8.98819408654222,9.94235029423593,9.16049856970089,5.12103332573321,3.88444942873078,4.50830942692322,5.90588850751411,4.65485969202302,10.4502371636575,8.66340558602325,6.34723636312289,4.23896565171712,5.92306386824642,0.592905254174298,0.333690211432188,1.76903095601883,0.674586337154561,1.21716072833102,2.894125917029,0.763877555344259,0.863088412352432,0.648540907100142,1.64736847912849,1.43768206527355,1.48856379067401,0.624075346229121,0.252578877947112,1.07638448113147,0.482443521363367,10.3461786493299,1.89491411770485,3.09633455239849,1.18821560042632,2.58159273117352,4.52266895092903,5.71304738126433,15.2204245329083,9.77337893458384,10.6303051031412,12.9158362612565,11.9620219742489,5.69860440157455,10.2700831592873,0,0,2.45882136509518,2.20749397043786,2.0871576698413,2.46144541843627,0,2.27223834483936,0.315508219416257,2.34263246577983,1.93881057959519,1.91175038362042,4.23317480756549,3.96307143104365,1.61924280669958,2.63030272120181,1.97643888973262,1.92792789853084,3.12268187458191,3.38324646967785,5.21238269931443,9.07335676348945,7.96470830039777,2.91336763385978,2.72091201268276,2.45186603682668,2.06711325016541,3.07435147943927,6.71913562237375,2.54473610634254,4.9909632973861,2.84433082142234,7.37930260024991,2.06271086496374,4.42571487479924,2.88097750450096,3.36332577835162,2.57204442037911,2.12808280370728,2.85390108163313,2.63278432963394,6.08929898229199,1.17335854031855,2.33015277950202,0.661585194164886,2.96795255294664,5.48979050766079,3.61877549568935,1.67121281604391,1.80554989719567,10.4933101186746,1.48340241608408,0.683483523191411,4.54051109519089,3.88908507476395,1.50694765603753,0.136694227721025,0.686334519619568,1.01987057996313,0.69975726161829,1.38199973804424,4.77335309007557,3.63786392618306,2.64315307264903,2.16010681643603,4.18176592028937,3.49380101993884,2.42755823492677,4.71124697634415,3.92633912976044,4.66613903850454,11.1841076355647,0.56369293868419,5.83114529571517,3.64008679005615,1.55560950675238,2.19571699912143,0.844780627453891,3.87278887530988,3.9061315453185,3.35549902162275,1.44950472495604,1.44015003128933,1.26404448251271,4.05450430580328,4.5192821152524,7.53540773271211,8.23522800070415,6.75516606256301,5.4087952283986,2.21534290761866,3.73575864808146,4.41999478598999,3.12561173924206,1.75424185331554,1.73181314952593,1.40252282617883,2.72076460338254,0.443971906748129,0.179427713218951,0,4.25017106870819,3.19060208267009,8.05867146775966,3.00115730710692,2.50786052017682,1.12950368523413,0.460325236507177,0,0.343706364687375,1.37016503954128,0.755393897389701,0,0.45032120322422,0,1.03552062350364,4.67043064128795,3.99024873401031,2.39027048055788,2.18796045361465,1.46729213839588,1.10306105070008,2.44471400581777,1.64828045791115,5.13470735346904,2.27427490587418,2.02783439912192,1.50901073108861,2.90288673156635,2.68905640100451,2.29741875822453,3.81034953026459,3.01299247456624,1.15745532278223,3.29668720642645,2.06078488188156,3.42869252385415,2.66213709239006,1.90748951957857,2.61623549938191,1.88218760830661,2.36920902096694,4.024415403201,2.10455769150274,2.44447404922551,2.80571135828869,2.37270036248348,2.65962102414021,2.86461730218783,3.71848418846318,0.771626443924566,2.24829520144151,2.8071793013449,5.37177635120746,2.29545998482612,1.54413993383661,2.78241402744506|short_description=p2@Sox13}}
|EntrezGene=20668
|HGNC=
|UniProt=Q04891
|association_with_transcript=-8bp_to_ENSMUST00000153799_5end
|description=CAGE_peak_2_at_Sox13_5end
|id=chr1:135320962..135320981,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!1.98e-14!43;UBERON:0005409!7.33e-14!59;UBERON:0001007!3.00e-07!128;UBERON:0001555!3.00e-07!128;UBERON:0007026!3.00e-07!128;UBERON:0004921!4.33e-07!126;UBERON:0004185!4.33e-07!126;UBERON:0004119!4.61e-07!130;UBERON:0000925!4.61e-07!130;UBERON:0006595!4.61e-07!130;UBERON:0001242!8.73e-07!13;UBERON:0000060!8.73e-07!13;UBERON:0001262!8.73e-07!13;UBERON:0004786!8.73e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.43e-14,31;UBERON:0005409,2.34e-12,47;UBERON:0001242,7.10e-07,13;UBERON:0001262,7.10e-07,13;UBERON:0004786,7.10e-07,13
|phase1_expression=5.76535849577258,29.6629096493457,22.2949627300873,13.6108895088074,22.0394121176393,4.36486106970913,5.13947809310157,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,5.3577272795174,0,0,2.07990149631429,4.12936705920906,20.6723507081407,10.7690499039769,7.54149314400612,10.0712412311878,10.0812051903972,6.65191531965914,0,0,0,3.75507105676657,2.65975432573588,3.26670970019791,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0.782391344348039,0,0.439372365468944,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0,0.286533439938757,0,0.809265843438391,0.528990979272033,1.26766280701236,0,0,0,0,0,2.39680088414724,0.768436610643109,0.829516898467821,1.4850653216486,1.26194976810829,1.99955689082663,0.883474163806454,0.979926393719632,0.958454710182364,0.919218786610021,4.40463523997555,2.042997409363,2.15049146558741,2.76961204233407,2.19570344645783,1.56274011167028,1.95428099300967,0,1.06958773443767,2.35702868378934,1.56608848879013,2.05039390407831,5.37655972665607,8.38844317185319,2.89864488701678,0,0.679971333707751,0,0.649776417447669,0,2.10666630197628,0,0,0.35333957451034,15.0702459161048,0,0,0,1.29894624606728,1.52015919285059,1.51657333504435,3.88225191044804,0,2.07818994690755,3.29622120855658,1.21786191324856,2.7673859670727,2.56228488939458,2.58695155698551,2.13633205260448,3.70792451601561,2.60278842455841,0.884610551949874,2.10296904931632,1.76673214768315,0.969750506270444,1.86391761218122,0.292780797011547,0.628340120440365,12.0064815948038,0,0,0.127070227073065,1.04853447583376,1.37250180845588,1.25654352112864,1.21677024134594,1.02286182932132,2.0778804455956,1.78465389374533,6.00852246716866,2.98576729464223,3.53811861807145,2.73574412652416,4.29397461776922,3.44853156650209,2.34080768746954,3.76762044589288,6.12328492361951,5.89323113310309,5.24729657534481,4.39795730256327,2.37124792226126,1.32374256117473,1.58356011747554,1.53437012699302,2.22437799380478,1.74126083261083,1.23469281844766,3.38358253591438,0,0,0,1.44988040774851,0.703578179943289,1.80062061461015,1.65721314909647,1.96764231747404,2.1597395804233,3.25547522650571,2.95100741539581,3.26942958628075,2.79751744852917,3.447516745661,4.29664690593035,4.23979963533464,2.63460138349261,4.96563749413376,1.26173969138476,1.02904612379284,14.8688452342709,5.81791246659797,2.77274725695804,3.71578674976702,3.99489130098489,6.25218926332362,6.0042071838115,5.89699440948933,9.01605216934572,6.58795818896044,10.8074139784116,7.16243299348143,8.77338392036041,8.98819408654222,9.94235029423593,9.16049856970089,5.12103332573321,3.88444942873078,4.50830942692322,5.90588850751411,4.65485969202302,10.4502371636575,8.66340558602325,6.34723636312289,4.23896565171712,5.92306386824642,0.592905254174298,0.333690211432188,1.76903095601883,0.674586337154561,1.21716072833102,2.894125917029,0.763877555344259,0.863088412352432,0.648540907100142,1.64736847912849,1.43768206527355,1.48856379067401,0.624075346229121,0.252578877947112,1.07638448113147,0.482443521363367,10.3461786493299,1.89491411770485,3.09633455239849,1.18821560042632,2.58159273117352,4.52266895092903,5.71304738126433,15.2204245329083,9.77337893458384,10.6303051031412,12.9158362612565,11.9620219742489,5.69860440157455,10.2700831592873,0,0,2.45882136509518,2.20749397043786,2.0871576698413,2.46144541843627,0,2.27223834483936,0.315508219416257,2.34263246577983,1.93881057959519,1.91175038362042,4.23317480756549,3.96307143104365,1.61924280669958,2.63030272120181,1.97643888973262,1.92792789853084,3.12268187458191,3.38324646967785,5.21238269931443,9.07335676348945,7.96470830039777,2.91336763385978,2.72091201268276,2.45186603682668,2.06711325016541,3.07435147943927,6.71913562237375,2.54473610634254,4.9909632973861,2.84433082142234,7.37930260024991,2.06271086496374,4.42571487479924,2.88097750450096,3.36332577835162,2.57204442037911,2.12808280370728,2.85390108163313,2.63278432963394,6.08929898229199,1.17335854031855,2.33015277950202,0.661585194164886,2.96795255294664,5.48979050766079,3.61877549568935,1.67121281604391,1.80554989719567,10.4933101186746,1.48340241608408,0.683483523191411,4.54051109519089,3.88908507476395,1.50694765603753,0.136694227721025,0.686334519619568,1.01987057996313,0.69975726161829,1.38199973804424,4.77335309007557,3.63786392618306,2.64315307264903,2.16010681643603,4.18176592028937,3.49380101993884,2.42755823492677,4.71124697634415,3.92633912976044,4.66613903850454,11.1841076355647,0.56369293868419,5.83114529571517,3.64008679005615,1.55560950675238,2.19571699912143,0.844780627453891,3.87278887530988,3.9061315453185,3.35549902162275,1.44950472495604,1.44015003128933,1.26404448251271,4.05450430580328,4.5192821152524,7.53540773271211,8.23522800070415,6.75516606256301,5.4087952283986,2.21534290761866,3.73575864808146,4.41999478598999,3.12561173924206,1.75424185331554,1.73181314952593,1.40252282617883,2.72076460338254,0.443971906748129,0.179427713218951,0,4.25017106870819,3.19060208267009,8.05867146775966,3.00115730710692,2.50786052017682,1.12950368523413,0.460325236507177,0,0.343706364687375,1.37016503954128,0.755393897389701,0,0.45032120322422,0,1.03552062350364,4.67043064128795,3.99024873401031,2.39027048055788,2.18796045361465,1.46729213839588,1.10306105070008,2.44471400581777,1.64828045791115,5.13470735346904,2.27427490587418,2.02783439912192,1.50901073108861,2.90288673156635,2.68905640100451,2.29741875822453,3.81034953026459,3.01299247456624,1.15745532278223,3.29668720642645,2.06078488188156,3.42869252385415,2.66213709239006,1.90748951957857,2.61623549938191,1.88218760830661,2.36920902096694,4.024415403201,2.10455769150274,2.44447404922551,2.80571135828869,2.37270036248348,2.65962102414021,2.86461730218783,3.71848418846318,0.771626443924566,2.24829520144151,2.8071793013449,5.37177635120746,2.29545998482612,1.54413993383661,2.78241402744506
|short_description=p2@Sox13
}}

Revision as of 18:53, 13 September 2013

Short description:p2@Sox13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sox13_5end
Coexpression cluster:NA
Association with transcript: -8bp_to_ENSMUST00000153799_5end
EntrezGene:Sox13
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sox13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I529.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I622.29
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.61
CD326+ enterocyte, pool2.CNhs13197.11849-124I422.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H920.67
GP2+ M cell, pool2.CNhs13231.11846-124I110.77
GP2+ M cell, pool3.CNhs13240.11847-124I27.54
Ileum epithelium, pool1.CNhs13199.10252-104B910.07
Ileum epithelium, pool2.CNhs13232.10253-104C110.08
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D95.38
Mouse Schwann, donor2.CNhs12573.11746-123F98.39
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.88
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H712.01
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C64.29
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C66.12
eyeball, neonate N01.CNhs11140.1532-43E75.89
eyeball, neonate N02.CNhs11205.1551-44G85.25
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E33.27
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G13.45
heart, neonate N16.CNhs11209.782-15G14.30
heart, neonate N20.CNhs11127.821-26I64.24
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D24.97
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I314.87
intestine, adult.CNhs10496.178-9A35.82
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D83.99
intestine, embryo E16.CNhs10585.463-22H46.25
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F75.90
intestine, neonate N00.CNhs11126.644-26D19.02
intestine, neonate N01.CNhs11192.1322-23E96.59
intestine, neonate N06.CNhs11102.688-20B810.81
intestine, neonate N07.CNhs11095.720-20F27.16
intestine, neonate N10.CNhs11098.755-23A58.77
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E39.94
intestine, neonate N30.CNhs11131.1384-42G19.16
kidney, embryo E14.CNhs10606.411-4I95.12
kidney, embryo E15.CNhs10997.434-16F83.88
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.91
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G710.45
kidney, neonate N10.CNhs11206.758-6D58.66
kidney, neonate N20.CNhs11113.832-19I16.35
kidney, neonate N25.CNhs11122.1353-25F34.24
kidney, neonate N30.CNhs11203.1385-42H15.92
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B110.35
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A64.52
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C615.22
lung, neonate N06.CNhs11212.683-20E59.77
lung, neonate N07.CNhs11111.715-19A310.63
lung, neonate N10.CNhs11219.750-23E612.92
lung, neonate N20.CNhs11109.822-18A411.96
lung, neonate N25.CNhs11119.1359-25C75.70
lung, neonate N30.CNhs11133.1394-42H210.27
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I45.21
oviduct, adult pregnant day01.CNhs10500.988-6G69.07
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G96.72
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G45.49
skin, neonate N03.CNhs11215.662-22H33.62
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I110.49
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F23.89
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A94.71
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I14.67
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F55.83
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I43.91
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I24.52
thymus, embryo E16.CNhs11002.456-26C57.54
thymus, embryo E17.CNhs10581.478-18C18.24
thymus, embryo E18.CNhs10595.1273-19G46.76
thymus, neonate N02.CNhs11181.1541-43F85.41
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C43.74
thymus, neonate N07.CNhs11211.713-19D34.42
thymus, neonate N10.CNhs11194.748-24E43.13
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E58.06
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I84.67
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.69
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C25.37
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine6.43e-1431
gastrointestinal system2.34e-1247
intestinal mucosa7.10e-0713
wall of intestine7.10e-0713
gastrointestinal system mucosa7.10e-0713







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:135320962..135320981,-&oldid=2963943"