FFCP PHASE1:Mm9::chr1:135557383..135557395,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=667118|HGNC=|MCL_coexpression_id=97|UniProt=D2EAC2,G0LE24|association_with_transcript=66bp_to_NM_001166552,uc007cqr.2_5end|description=CAGE_peak_5_at_Zbed6_5end|id=chr1:135557383..135557395,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,4.90e-53,3;CL:0000351,4.90e-53,3;CL:0000213,1.74e-18,1;CL:0002078,1.74e-18,1;CL:0000115,1.74e-18,1;CL:0002262,1.74e-18,1;CL:1000398,1.74e-18,1;CL:0000215,4.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.90e-53,3;UBERON:0000307,4.90e-53,3;UBERON:0007010,4.90e-53,3;UBERON:0002394,1.74e-18,1;UBERON:0001281,1.74e-18,1;UBERON:0000353,1.74e-18,1;UBERON:0003497,1.74e-18,1;UBERON:0003909,1.74e-18,1;UBERON:0003928,1.74e-18,1;UBERON:0003835,1.74e-18,1;UBERON:0003513,1.74e-18,1;UBERON:0001280,1.74e-18,1;UBERON:0004647,1.74e-18,1;UBERON:0002294,1.74e-18,1;UBERON:0001173,1.74e-18,1;UBERON:0004912,1.74e-18,1;UBERON:0005171,1.74e-18,1|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0.125896817975577,0,0.183546752161682,0.782391344348039,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204109497453984,0,0.0937017245597288,0,0,0.189106080167819,0,0,0.834141747676794,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0.358794827043824,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0.491764273019036,0,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0.659880491890142,0,0.242780636154981,0,0,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0.23467170806371,0.42366414172764,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0,0,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0,0,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0.724752362478018,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0.228620419965,0,0.292373642219257,0.0962118416403295,0,0,4.43971906748129,7.26682238536753,3.35769232728157,0.19318959403219,0.93841237725591,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0,0,0.320919209591815,0.758091635291392,0,0,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0|short_description=p5@Zbed6}} | ||
|EntrezGene=667118 | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|UniProt=D2EAC2,G0LE24 | |||
|association_with_transcript=66bp_to_NM_001166552,uc007cqr.2_5end | |||
|description=CAGE_peak_5_at_Zbed6_5end | |||
|id=chr1:135557383..135557395,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.90e-53,3;CL:0000351,4.90e-53,3;CL:0000213,1.74e-18,1;CL:0002078,1.74e-18,1;CL:0000115,1.74e-18,1;CL:0002262,1.74e-18,1;CL:1000398,1.74e-18,1;CL:0000215,4.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.90e-53,3;UBERON:0000307,4.90e-53,3;UBERON:0007010,4.90e-53,3;UBERON:0002394,1.74e-18,1;UBERON:0001281,1.74e-18,1;UBERON:0000353,1.74e-18,1;UBERON:0003497,1.74e-18,1;UBERON:0003909,1.74e-18,1;UBERON:0003928,1.74e-18,1;UBERON:0003835,1.74e-18,1;UBERON:0003513,1.74e-18,1;UBERON:0001280,1.74e-18,1;UBERON:0004647,1.74e-18,1;UBERON:0002294,1.74e-18,1;UBERON:0001173,1.74e-18,1;UBERON:0004912,1.74e-18,1;UBERON:0005171,1.74e-18,1 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0.125896817975577,0,0.183546752161682,0.782391344348039,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204109497453984,0,0.0937017245597288,0,0,0.189106080167819,0,0,0.834141747676794,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0.358794827043824,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0.491764273019036,0,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0.659880491890142,0,0.242780636154981,0,0,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0.23467170806371,0.42366414172764,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0,0,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0,0,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0.724752362478018,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0.228620419965,0,0.292373642219257,0.0962118416403295,0,0,4.43971906748129,7.26682238536753,3.35769232728157,0.19318959403219,0.93841237725591,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0,0,0.320919209591815,0.758091635291392,0,0,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0 | |||
|short_description=p5@Zbed6 | |||
}} |
Revision as of 18:53, 13 September 2013
Short description: | p5@Zbed6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Zbed6_5end |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | 66bp_to_NM_001166552, uc007cqr.2_5end |
EntrezGene: | Zbed6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.90e-53 | 3 |
trophoblast cell | 4.90e-53 | 3 |
lining cell | 1.74e-18 | 1 |
meso-epithelial cell | 1.74e-18 | 1 |
endothelial cell | 1.74e-18 | 1 |
endothelial cell of sinusoid | 1.74e-18 | 1 |
endothelial cell of hepatic sinusoid | 1.74e-18 | 1 |
barrier cell | 4.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 4.90e-53 | 3 |
blastula | 4.90e-53 | 3 |
cleaving embryo | 4.90e-53 | 3 |
bile duct | 1.74e-18 | 1 |
hepatic sinusoid | 1.74e-18 | 1 |
parenchyma | 1.74e-18 | 1 |
abdomen blood vessel | 1.74e-18 | 1 |
sinusoid | 1.74e-18 | 1 |
digestive system duct | 1.74e-18 | 1 |
abdominal segment blood vessel | 1.74e-18 | 1 |
trunk blood vessel | 1.74e-18 | 1 |
liver parenchyma | 1.74e-18 | 1 |
liver lobule | 1.74e-18 | 1 |
biliary system | 1.74e-18 | 1 |
biliary tree | 1.74e-18 | 1 |
biliary bud | 1.74e-18 | 1 |
hepatic duct | 1.74e-18 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.