FFCP PHASE1:Hg19::chr6:169648866..169648879,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7058|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11786|TSSclassifier=S|UniProt=|association_with_transcript=-91bp_to_ENST00000472733_5end|coexpression_cluster_id=C604|description=CAGE_peak_4_at_THBS2_5end|id=chr6:169648866..169648879,-|ontology_enrichment_celltype=CL:0000055!1.86e-19!180;CL:0000057!6.51e-16!75;CL:0002334!1.88e-12!12;CL:0000187!1.62e-10!54;CL:0000680!1.95e-10!57;CL:0000056!1.95e-10!57;CL:0000355!1.95e-10!57;CL:0000183!1.10e-09!59;CL:0000723!1.50e-09!436;CL:0000034!3.55e-09!444;CL:0000048!7.82e-09!430;CL:0000393!1.25e-08!60;CL:0000211!1.25e-08!60;CL:0000192!8.02e-08!42;CL:0000514!8.02e-08!42;CL:0000136!2.44e-07!15;CL:0002595!4.89e-07!5;CL:0000359!5.63e-07!32|ontology_enrichment_celltype_v019=CL:0002334;1.40e-24;12!CL:0002579;8.52e-13;3!CL:0002615;1.06e-12;3!CL:0002580;1.85e-12;3!CL:0000136;1.77e-10;13!CL:0000569;3.68e-09;4!CL:0002617;1.09e-08;2!CL:0002595;2.49e-07;5|ontology_enrichment_celltype_v019_2=CL:0002334,1.32e-24,12;CL:0002615,9.81e-13,3;CL:0002579,1.15e-12,3;CL:0002580,1.69e-12,3;CL:0000057,1.18e-11,76;CL:0000569,3.80e-09,4;CL:0000011,3.80e-09,4;CL:0000136,5.06e-09,15;CL:0002617,9.34e-09,2;CL:0000723,1.64e-08,433;CL:0000034,3.56e-08,441;CL:0000048,4.14e-08,427;CL:0000134,6.03e-08,354;CL:0002320,1.27e-07,361;CL:0002595,2.18e-07,5|ontology_enrichment_development_v019=CL:0000011;3.68e-09;4|ontology_enrichment_disease=DOID:2394!6.58e-10!14|ontology_enrichment_disease_v019=DOID:2394;3.89e-20;14!DOID:120;1.20e-09;27!DOID:193;7.16e-09;29|ontology_enrichment_disease_v019_2=DOID:2394,5.75e-20,14;DOID:120,1.45e-09,27;DOID:193,8.50e-09,29|ontology_enrichment_uberon=UBERON:0001134!3.50e-09!61;UBERON:0002036!3.50e-09!61;UBERON:0003082!3.50e-09!61;UBERON:0003688!4.18e-09!6;UBERON:0002358!4.18e-09!6;UBERON:0003684!4.18e-09!6;UBERON:0001178!4.18e-09!6;UBERON:0003102!7.23e-09!95;UBERON:0000914!9.71e-09!83;UBERON:0002329!9.71e-09!83;UBERON:0003077!9.71e-09!83;UBERON:0003059!9.71e-09!83;UBERON:0007282!9.71e-09!83;UBERON:0009618!9.71e-09!83;UBERON:0007285!9.71e-09!83;UBERON:0002199!1.10e-08!45;UBERON:0002416!1.10e-08!45;UBERON:0002385!1.27e-08!63;UBERON:0001015!1.27e-08!63;UBERON:0000383!1.27e-08!63;UBERON:0004290!3.40e-08!70;UBERON:0003513!1.09e-07!8;UBERON:0004573!1.36e-07!33;UBERON:0004571!1.36e-07!33;UBERON:0000486!1.55e-07!82;UBERON:0001637!2.78e-07!42;UBERON:0003509!2.78e-07!42;UBERON:0004572!2.78e-07!42;UBERON:0003834!4.89e-07!5;UBERON:0001533!4.89e-07!5;UBERON:0000475!6.90e-07!365|ontology_enrichment_uberon_v019=UBERON:0003688;9.57e-24;6!UBERON:0002358;9.57e-24;6!UBERON:0003684;9.57e-24;6!UBERON:0001178;9.57e-24;6!UBERON:0004457;4.37e-21;9!UBERON:0000042;4.37e-21;9!UBERON:0002118;3.19e-12;5!UBERON:0000310;1.49e-09;10!UBERON:0005406;4.53e-09;2!UBERON:0001443;1.18e-08;11!UBERON:0003834;2.49e-07;5!UBERON:0001533;2.49e-07;5!UBERON:0000992;5.06e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.19e-23,6;UBERON:0002358,1.19e-23,6;UBERON:0003684,1.19e-23,6;UBERON:0001178,1.19e-23,6;UBERON:0004457,1.69e-15,12;UBERON:0000042,1.69e-15,12;UBERON:0002118,3.50e-12,5;UBERON:0000310,1.32e-09,10;UBERON:0005406,3.65e-09,2;UBERON:0004458,8.10e-09,49;UBERON:0001443,1.06e-08,11;UBERON:0002323,6.43e-08,46;UBERON:0002384,7.45e-08,371;UBERON:0003834,2.18e-07,5;UBERON:0001533,2.18e-07,5;UBERON:0000992,5.61e-07,13|phase1_expression=2.18014055124668,2.99740733447376,2.96004248601539,3.00219895059391,5.81049422755474,8.72338524100369,0,0.631719873426831,0.783556884599516,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0.25326102332916,0.926864265692532,5.16305917347865,1.06400514659507,0,0,0,0,0.404132016209064,0.490385709340376,0,0,0,0,0,0.298897361103602,0,0.161872944368132,0,0,0.122834317311768,0.413303124703062,0,3.4617370098998,0,0.718618141816238,0,0,0,0,0.919463387397059,1.05166641234618,0.113432183160021,0.179389635688862,0.427114777637135,0,0,0.103052529238439,1.03056216018252,0.18611685633159,0.337552664482532,0.68205903612839,0.504867548488229,0.276149695926898,0.161646056818812,1.42003837006646,0.503760491138201,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.548751427043128,1.1240175325762,0.201057944823262,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0.517086863031111,0,0.845302752556,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,2.07970861530807,2.67643483195743,2.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7058 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11786 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-91bp_to_ENST00000472733_5end | |||
|coexpression_cluster_id=C604 | |||
|description=CAGE_peak_4_at_THBS2_5end | |||
|id=chr6:169648866..169648879,- | |||
|ontology_enrichment_celltype=CL:0000055!1.86e-19!180;CL:0000057!6.51e-16!75;CL:0002334!1.88e-12!12;CL:0000187!1.62e-10!54;CL:0000680!1.95e-10!57;CL:0000056!1.95e-10!57;CL:0000355!1.95e-10!57;CL:0000183!1.10e-09!59;CL:0000723!1.50e-09!436;CL:0000034!3.55e-09!444;CL:0000048!7.82e-09!430;CL:0000393!1.25e-08!60;CL:0000211!1.25e-08!60;CL:0000192!8.02e-08!42;CL:0000514!8.02e-08!42;CL:0000136!2.44e-07!15;CL:0002595!4.89e-07!5;CL:0000359!5.63e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.40e-24;12!CL:0002579;8.52e-13;3!CL:0002615;1.06e-12;3!CL:0002580;1.85e-12;3!CL:0000136;1.77e-10;13!CL:0000569;3.68e-09;4!CL:0002617;1.09e-08;2!CL:0002595;2.49e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.32e-24,12;CL:0002615,9.81e-13,3;CL:0002579,1.15e-12,3;CL:0002580,1.69e-12,3;CL:0000057,1.18e-11,76;CL:0000569,3.80e-09,4;CL:0000011,3.80e-09,4;CL:0000136,5.06e-09,15;CL:0002617,9.34e-09,2;CL:0000723,1.64e-08,433;CL:0000034,3.56e-08,441;CL:0000048,4.14e-08,427;CL:0000134,6.03e-08,354;CL:0002320,1.27e-07,361;CL:0002595,2.18e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000011;3.68e-09;4 | |||
|ontology_enrichment_disease=DOID:2394!6.58e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.89e-20;14!DOID:120;1.20e-09;27!DOID:193;7.16e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.75e-20,14;DOID:120,1.45e-09,27;DOID:193,8.50e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.50e-09!61;UBERON:0002036!3.50e-09!61;UBERON:0003082!3.50e-09!61;UBERON:0003688!4.18e-09!6;UBERON:0002358!4.18e-09!6;UBERON:0003684!4.18e-09!6;UBERON:0001178!4.18e-09!6;UBERON:0003102!7.23e-09!95;UBERON:0000914!9.71e-09!83;UBERON:0002329!9.71e-09!83;UBERON:0003077!9.71e-09!83;UBERON:0003059!9.71e-09!83;UBERON:0007282!9.71e-09!83;UBERON:0009618!9.71e-09!83;UBERON:0007285!9.71e-09!83;UBERON:0002199!1.10e-08!45;UBERON:0002416!1.10e-08!45;UBERON:0002385!1.27e-08!63;UBERON:0001015!1.27e-08!63;UBERON:0000383!1.27e-08!63;UBERON:0004290!3.40e-08!70;UBERON:0003513!1.09e-07!8;UBERON:0004573!1.36e-07!33;UBERON:0004571!1.36e-07!33;UBERON:0000486!1.55e-07!82;UBERON:0001637!2.78e-07!42;UBERON:0003509!2.78e-07!42;UBERON:0004572!2.78e-07!42;UBERON:0003834!4.89e-07!5;UBERON:0001533!4.89e-07!5;UBERON:0000475!6.90e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.57e-24;6!UBERON:0002358;9.57e-24;6!UBERON:0003684;9.57e-24;6!UBERON:0001178;9.57e-24;6!UBERON:0004457;4.37e-21;9!UBERON:0000042;4.37e-21;9!UBERON:0002118;3.19e-12;5!UBERON:0000310;1.49e-09;10!UBERON:0005406;4.53e-09;2!UBERON:0001443;1.18e-08;11!UBERON:0003834;2.49e-07;5!UBERON:0001533;2.49e-07;5!UBERON:0000992;5.06e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.19e-23,6;UBERON:0002358,1.19e-23,6;UBERON:0003684,1.19e-23,6;UBERON:0001178,1.19e-23,6;UBERON:0004457,1.69e-15,12;UBERON:0000042,1.69e-15,12;UBERON:0002118,3.50e-12,5;UBERON:0000310,1.32e-09,10;UBERON:0005406,3.65e-09,2;UBERON:0004458,8.10e-09,49;UBERON:0001443,1.06e-08,11;UBERON:0002323,6.43e-08,46;UBERON:0002384,7.45e-08,371;UBERON:0003834,2.18e-07,5;UBERON:0001533,2.18e-07,5;UBERON:0000992,5.61e-07,13 | |||
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|short_description=p4@THBS2 | |||
}} |
Revision as of 19:26, 13 September 2013
Short description: | p4@THBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_THBS2_5end |
Coexpression cluster: | C604_Fibroblast_hepatic_Ewing_Preadipocyte_Smooth_Adipocyte_Olfactory |
Association with transcript: | -91bp_to_ENST00000472733_5end |
EntrezGene: | THBS2 |
HGNC: | 11786 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.32e-24 | 12 |
adipocyte of omentum tissue | 9.81e-13 | 3 |
omentum preadipocyte | 1.15e-12 | 3 |
preadipocyte of the breast | 1.69e-12 | 3 |
fibroblast | 1.18e-11 | 76 |
cardiac mesenchymal cell | 3.80e-09 | 4 |
migratory trunk neural crest cell | 3.80e-09 | 4 |
fat cell | 5.06e-09 | 15 |
adipocyte of breast | 9.34e-09 | 2 |
somatic stem cell | 1.64e-08 | 433 |
stem cell | 3.56e-08 | 441 |
multi fate stem cell | 4.14e-08 | 427 |
mesenchymal cell | 6.03e-08 | 354 |
connective tissue cell | 1.27e-07 | 361 |
smooth muscle cell of the subclavian artery | 2.18e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.19e-23 | 6 |
peritoneum | 1.19e-23 | 6 |
abdominal cavity | 1.19e-23 | 6 |
visceral peritoneum | 1.19e-23 | 6 |
cavity lining | 1.69e-15 | 12 |
serous membrane | 1.69e-15 | 12 |
right ovary | 3.50e-12 | 5 |
breast | 1.32e-09 | 10 |
perirenal fat | 3.65e-09 | 2 |
body cavity or lining | 8.10e-09 | 49 |
chest | 1.06e-08 | 11 |
body cavity | 6.43e-08 | 46 |
connective tissue | 7.45e-08 | 371 |
thoracic segment blood vessel | 2.18e-07 | 5 |
subclavian artery | 2.18e-07 | 5 |
female gonad | 5.61e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.75e-20 | 14 |
female reproductive organ cancer | 1.45e-09 | 27 |
reproductive organ cancer | 8.50e-09 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.