FFCP PHASE1:Mm9::chr1:74672878..74672903,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=269209|HGNC=|MCL_coexpression_id=402|UniProt=|association_with_transcript=-135bp_to_ENSMUST00000123154,uc007bmx.1_5end|description=CAGE_peak_4_at_Stk36_5end|id=chr1:74672878..74672903,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!5.03e-15!14;UBERON:0000117!5.03e-15!14;UBERON:0000171!5.03e-15!14;UBERON:0000170!5.03e-15!14;UBERON:0005597!5.03e-15!14;UBERON:0000118!5.03e-15!14;UBERON:0005153!6.03e-12!17;UBERON:0005178!6.03e-12!17;UBERON:0005181!6.03e-12!17;UBERON:0002224!6.03e-12!17;UBERON:0000915!6.03e-12!17;UBERON:0008947!6.03e-12!17;UBERON:0003258!6.03e-12!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.49e-37,14;UBERON:0000117,1.49e-37,14;UBERON:0000171,1.49e-37,14;UBERON:0000170,1.49e-37,14;UBERON:0005597,1.49e-37,14;UBERON:0000118,1.49e-37,14;UBERON:0005153,4.81e-31,17;UBERON:0005178,4.81e-31,17;UBERON:0005181,4.81e-31,17;UBERON:0002224,4.81e-31,17;UBERON:0000915,4.81e-31,17;UBERON:0008947,4.81e-31,17;UBERON:0003258,4.81e-31,17;UBERON:0005157,1.76e-26,20;UBERON:0000065,3.51e-13,41;UBERON:0001004,7.06e-13,42;UBERON:0000310,1.66e-10,6;UBERON:0001443,1.66e-10,6;UBERON:0009569,2.50e-08,66;UBERON:0005911,5.59e-08,69;UBERON:0005177,5.28e-07,79;UBERON:0001041,6.41e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,1.29327233116623,0,0,0,0,1.34005005953453,7.14130922658041,3.31727201358258,2.36452716159286,0.44292937929755,0.797273843287435,0.655453258862952,0.863424909329478,1.88043776155965,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.280924522409647,0.192075457214608,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0.914639864363863,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0,0,0.233931608445408,0,0,0,0|short_description=p4@Stk36}} | ||
|EntrezGene=269209 | |||
|HGNC= | |||
|MCL_coexpression_id=402 | |||
|UniProt= | |||
|association_with_transcript=-135bp_to_ENSMUST00000123154,uc007bmx.1_5end | |||
|description=CAGE_peak_4_at_Stk36_5end | |||
|id=chr1:74672878..74672903,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!5.03e-15!14;UBERON:0000117!5.03e-15!14;UBERON:0000171!5.03e-15!14;UBERON:0000170!5.03e-15!14;UBERON:0005597!5.03e-15!14;UBERON:0000118!5.03e-15!14;UBERON:0005153!6.03e-12!17;UBERON:0005178!6.03e-12!17;UBERON:0005181!6.03e-12!17;UBERON:0002224!6.03e-12!17;UBERON:0000915!6.03e-12!17;UBERON:0008947!6.03e-12!17;UBERON:0003258!6.03e-12!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.49e-37,14;UBERON:0000117,1.49e-37,14;UBERON:0000171,1.49e-37,14;UBERON:0000170,1.49e-37,14;UBERON:0005597,1.49e-37,14;UBERON:0000118,1.49e-37,14;UBERON:0005153,4.81e-31,17;UBERON:0005178,4.81e-31,17;UBERON:0005181,4.81e-31,17;UBERON:0002224,4.81e-31,17;UBERON:0000915,4.81e-31,17;UBERON:0008947,4.81e-31,17;UBERON:0003258,4.81e-31,17;UBERON:0005157,1.76e-26,20;UBERON:0000065,3.51e-13,41;UBERON:0001004,7.06e-13,42;UBERON:0000310,1.66e-10,6;UBERON:0001443,1.66e-10,6;UBERON:0009569,2.50e-08,66;UBERON:0005911,5.59e-08,69;UBERON:0005177,5.28e-07,79;UBERON:0001041,6.41e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,1.29327233116623,0,0,0,0,1.34005005953453,7.14130922658041,3.31727201358258,2.36452716159286,0.44292937929755,0.797273843287435,0.655453258862952,0.863424909329478,1.88043776155965,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.280924522409647,0.192075457214608,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0.914639864363863,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p4@Stk36 | |||
}} |
Revision as of 20:56, 13 September 2013
Short description: | p4@Stk36 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Stk36_5end |
Coexpression cluster: | MCL_coexpression_mm9:402 |
Association with transcript: | -135bp_to_ENSMUST00000123154, uc007bmx.1_5end |
EntrezGene: | Stk36 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 1.49e-37 | 14 |
respiratory tube | 1.49e-37 | 14 |
respiration organ | 1.49e-37 | 14 |
pair of lungs | 1.49e-37 | 14 |
lung primordium | 1.49e-37 | 14 |
lung bud | 1.49e-37 | 14 |
epithelial bud | 4.81e-31 | 17 |
thoracic cavity element | 4.81e-31 | 17 |
thoracic segment organ | 4.81e-31 | 17 |
thoracic cavity | 4.81e-31 | 17 |
thoracic segment of trunk | 4.81e-31 | 17 |
respiratory primordium | 4.81e-31 | 17 |
endoderm of foregut | 4.81e-31 | 17 |
epithelial fold | 1.76e-26 | 20 |
respiratory tract | 3.51e-13 | 41 |
respiratory system | 7.06e-13 | 42 |
breast | 1.66e-10 | 6 |
chest | 1.66e-10 | 6 |
subdivision of trunk | 2.50e-08 | 66 |
endo-epithelium | 5.59e-08 | 69 |
trunk region element | 5.28e-07 | 79 |
foregut | 6.41e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.