FFCP PHASE1:Mm9::chr1:88806278..88806282,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=672|UniProt=|association_with_transcript=-14bp_to_ENSMUST00000167233_5end|description=CAGE_peak_1_at_ENSMUST00000167233_5end|id=chr1:88806278..88806282,-|ontology_enrichment_celltype=CL:0000063!1.29e-13!66;CL:0000144!4.76e-12!121;CL:0000012!4.76e-12!121;CL:0000034!5.79e-11!97;CL:0000988!5.84e-11!32;CL:0002032!5.84e-11!32;CL:0000037!5.84e-11!32;CL:0000566!5.84e-11!32;CL:0000837!5.84e-11!32;CL:0002371!7.03e-11!118;CL:0000548!9.51e-11!115;CL:0000004!9.51e-11!115;CL:0000255!9.51e-11!115;CL:0000723!2.52e-09!91;CL:0000048!2.52e-09!91;CL:0002320!2.77e-09!46;CL:0000134!2.77e-09!46;CL:0000838!1.21e-08!12;CL:0000542!1.78e-08!13;CL:0000051!1.78e-08!13;CL:0000084!3.43e-08!11;CL:0000827!3.43e-08!11;CL:0002031!8.56e-08!25;CL:0000791!4.80e-07!9;CL:0000789!4.80e-07!9;CL:0002420!4.80e-07!9;CL:0002419!4.80e-07!9;CL:0000790!4.80e-07!9;CL:0000219!5.28e-07!54;CL:0000738!7.27e-07!17;CL:0002087!7.27e-07!17|ontology_enrichment_celltype_v019_2=CL:0000988,4.25e-15,32;CL:0002032,4.25e-15,32;CL:0000037,4.25e-15,32;CL:0000837,4.25e-15,32;CL:0000034,1.27e-14,97;CL:0002320,1.07e-13,46;CL:0000134,1.07e-13,46;CL:0000723,1.43e-12,91;CL:0000048,1.43e-12,91;CL:0000219,4.55e-12,54;CL:0000838,5.66e-12,12;CL:0000084,2.62e-11,11;CL:0000827,2.62e-11,11;CL:0002031,3.18e-11,25;CL:0000542,1.10e-10,13;CL:0000051,1.10e-10,13;CL:0000791,1.25e-09,9;CL:0000789,1.25e-09,9;CL:0002420,1.25e-09,9;CL:0002419,1.25e-09,9;CL:0000790,1.25e-09,9;CL:0000624,1.08e-08,8;CL:0000738,1.40e-08,17;CL:0002087,1.40e-08,17;CL:0000893,3.82e-07,6;CL:0002489,3.82e-07,6;CL:0000898,3.82e-07,6;CL:0000809,3.82e-07,6;CL:0000810,3.82e-07,6;CL:0000895,3.82e-07,6;CL:0000808,3.82e-07,6;CL:0000894,3.82e-07,6;CL:0000806,3.82e-07,6;CL:0000807,3.82e-07,6;CL:0000805,3.82e-07,6;CL:0002425,3.82e-07,6;CL:0002436,3.82e-07,6;CL:0002427,3.82e-07,6;CL:0002428,3.82e-07,6;CL:0002429,3.82e-07,6;CL:0002433,3.82e-07,6;CL:0002431,3.82e-07,6;CL:0002432,3.82e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.77e-09!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.07e-13,46|phase1_expression=1.60148847104794,1.74487703819681,0.454999239389536,0.30246421130683,1.00179145989269,1.34303417529512,2.10251376535973,5.03580961422147,8.4473233291,9.12851652655775,4.28044920563762,3.11111420081812,10.2720437958723,3.84649770643589,0.999329285446988,2.42970320867791,2.09868563438444,10.4102514568218,4.66189074259512,4.66828616977833,0.340173160604279,3.87234709683453,2.87319768052829,2.71987118748791,2.98232065387321,1.72269589234506,2.58457197695445,2.37018355954478,2.66032787238923,1.26015064879965,1.10865255327652,1.27006134691926,0,0,2.88851619751275,6.31691652362271,4.28755648150975,1.67412652294763,0,1.57057123192139,0.588231488031014,0,0,1.6366586336825,2.23029248682932,2.0190142737785,0,0.218025156380447,0.219686182734472,0,0.419959264876088,0,2.34895648480831,2.17608642603403,4.7053131879945,1.54355661621568,1.43266719969378,2.57836046138721,0.606949382578793,0,0,1.35537812827653,0,0.449949858640699,0,2.8419204597844,0.599200221036809,0,1.45165457231869,1.62007125998029,0.210324961351382,1.14260393761521,0.662605622854841,0.734944795289724,0.670918297127655,0,0,0,0.46081959976873,1.45074916503213,0.823388792421687,0.52091337055676,0.837548997004143,1.68828783009504,0.45839474333043,0.883885756421003,0.284743361598206,1.86399445825301,5.83091688665517,2.26714680320357,3.47837386442013,0.860423876981386,0,1.61910957491345,0.649776417447669,0,0.280888840263504,0.511290967734173,2.59786004602869,2.82671659608272,1.83096445709685,1.28326477414318,2.54805239706646,0,0.649473123033642,0.760079596425296,2.52762222507392,0.11418387971906,0,0,0,2.13125834818499,1.15307748628029,0.301445281105245,0.470354828542819,0,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0.766371165625774,3.23500836165985,4.79922184794726,5.33694953706872,0.299581278809645,0,0.628271760564322,0.521472960576829,0.255715457330331,0.20778804455956,0.324482526135515,0.203678727700633,0.373220911830279,0.758168275301024,0,0.520481771850815,2.29902104433473,0.540186389416048,1.05493372485001,0.204109497453984,0,0.468508622798644,0.517406741478031,0.215567992932842,0.378212160335639,0.879755620819744,1.09597866213787,1.39023624612799,0.696504333044333,1.02891068203972,0,3.51106593656617,2.05878325691772,2.27330799516474,0.828503090142008,0.469052119962192,0.900310307305074,0.946978942340841,0.787056926989615,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0.492502392237286,0.0810688095458557,0.438599962275997,0.219550115291051,0.268412837520744,0,0.205809224758569,0.330418782983798,0.528901133327089,0.853153002140936,0.464473343720877,0.644337306610467,0.403367049246685,0.444756087689741,0.760902504450237,0.949058123089023,1.15289268306808,1.00534083520108,0.198956472041151,0.58489226135736,0,0.216138049874694,0.597423819763102,0.758671603812327,1.37098215131675,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,0.0632365371242573,0.147610147979602,0,0.493588655687202,0.889357881261447,0.500535317148282,0.786235980452812,0.899448449539415,1.21716072833102,0.241177159752417,1.2731292589071,1.43848068725405,0.972811360650212,0.549122826376163,0,0.744281895337007,0,0.505157755894224,0.358794827043824,0.482443521363367,0.554259570499814,1.13694847062291,0.488894929326078,1.35796068620151,2.34690248288502,1.17254380209271,0.714130922658041,0.195133647857799,0.157635144106191,0.44292937929755,0.478364305972461,1.14704320301017,0.518054945597687,0.433947175744535,3.01582567878545,0.54390568381871,0.491764273019036,0.827810238914197,0,0.586058432961016,1.63934945376675,0.252470927204373,0.631016438832513,1.95219372148319,0.646270193198397,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,0.642642632843614,0.141940085208269,0.534196811001766,0.488660878060728,0.164970122972535,1.32745138339963,1.94224508923985,1.209294227859,2.82907619633847,0.885905678642318,1.22974059177571,0.775284879504663,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0.900305470156551,1.16422815404479,0.643011105094777,1.06404140185364,0.535106452806212,0,1.2178597964584,0.704015124191131,0.42366414172764,1.32317038832977,0.32977250588296,0.161464426695906,0.301564624640779,0.596861720015682,0.492422699235184,0.291480836629851,0.370850604021019,0.854354403989263,0.619160603889667,0.555583582109135,0,0,0.457556346413045,3.22959016988325,1.25956307091292,3.45499934511059,0,0.474503990371703,0.609958401380546,0.648032044930808,1.04544148007234,0,0.269728692769641,0.41326727862668,1.04702376793612,0,0.621339313086926,0,0.299033092087958,1.15820943319968,0.583353565032143,1.29159823477731,1.01373675294467,0.352071715937262,0.651021924219751,0.629156066554265,0.241584120826006,0.288030006257865,0.316011120628178,0,1.43795340030758,2.07873316764472,0.537080087002444,0.39736270956253,0.841368146639782,0.738447635872886,0.201932899896295,0.228620419965,0.806609481094724,0.682205165178267,1.05833025804362,0.233753804363138,0,0.665957860122194,2.15313255862742,1.00730769818447,0.965947970160952,0.750729901804728,0.73260649706906,1.71494703263253,0.501572104035363,0,0,0,0.515559547031063,0,0.755393897389701,0,0,0,0,0.726511433089237,0,1.19513524027894,0.729320151204882,0.209613162627982,0.735374033800057,1.11123363900808,1.44224540067226,0.320919209591815,0.758091635291392,0.760437899670719,0.565879024158229,0.561849044819294,0.320125762024346,0.631790158511746,0.476293691283074,1.0429589335037,0.38581844092741,1.64834360321323,0.735994600671987,0.342869252385415,0.70990322463735,0.715308569841963,1.30811774969096,0.188218760830661,0.338458431566706,0.73171189149109,0.789209134313529,0.814824683075171,0,0.474540072496697,0.689531376628944,0.409231043169689,0.154936841185966,1.92906610981141,0.499621155875892,0.467863216890817,0.429742108096597,0.956441660344217,1.32354851471709,0.231867835620421|short_description=p1@ENSMUST00000167233}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=672 | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENSMUST00000167233_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000167233_5end | |||
|id=chr1:88806278..88806282,- | |||
|ontology_enrichment_celltype=CL:0000063!1.29e-13!66;CL:0000144!4.76e-12!121;CL:0000012!4.76e-12!121;CL:0000034!5.79e-11!97;CL:0000988!5.84e-11!32;CL:0002032!5.84e-11!32;CL:0000037!5.84e-11!32;CL:0000566!5.84e-11!32;CL:0000837!5.84e-11!32;CL:0002371!7.03e-11!118;CL:0000548!9.51e-11!115;CL:0000004!9.51e-11!115;CL:0000255!9.51e-11!115;CL:0000723!2.52e-09!91;CL:0000048!2.52e-09!91;CL:0002320!2.77e-09!46;CL:0000134!2.77e-09!46;CL:0000838!1.21e-08!12;CL:0000542!1.78e-08!13;CL:0000051!1.78e-08!13;CL:0000084!3.43e-08!11;CL:0000827!3.43e-08!11;CL:0002031!8.56e-08!25;CL:0000791!4.80e-07!9;CL:0000789!4.80e-07!9;CL:0002420!4.80e-07!9;CL:0002419!4.80e-07!9;CL:0000790!4.80e-07!9;CL:0000219!5.28e-07!54;CL:0000738!7.27e-07!17;CL:0002087!7.27e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.25e-15,32;CL:0002032,4.25e-15,32;CL:0000037,4.25e-15,32;CL:0000837,4.25e-15,32;CL:0000034,1.27e-14,97;CL:0002320,1.07e-13,46;CL:0000134,1.07e-13,46;CL:0000723,1.43e-12,91;CL:0000048,1.43e-12,91;CL:0000219,4.55e-12,54;CL:0000838,5.66e-12,12;CL:0000084,2.62e-11,11;CL:0000827,2.62e-11,11;CL:0002031,3.18e-11,25;CL:0000542,1.10e-10,13;CL:0000051,1.10e-10,13;CL:0000791,1.25e-09,9;CL:0000789,1.25e-09,9;CL:0002420,1.25e-09,9;CL:0002419,1.25e-09,9;CL:0000790,1.25e-09,9;CL:0000624,1.08e-08,8;CL:0000738,1.40e-08,17;CL:0002087,1.40e-08,17;CL:0000893,3.82e-07,6;CL:0002489,3.82e-07,6;CL:0000898,3.82e-07,6;CL:0000809,3.82e-07,6;CL:0000810,3.82e-07,6;CL:0000895,3.82e-07,6;CL:0000808,3.82e-07,6;CL:0000894,3.82e-07,6;CL:0000806,3.82e-07,6;CL:0000807,3.82e-07,6;CL:0000805,3.82e-07,6;CL:0002425,3.82e-07,6;CL:0002436,3.82e-07,6;CL:0002427,3.82e-07,6;CL:0002428,3.82e-07,6;CL:0002429,3.82e-07,6;CL:0002433,3.82e-07,6;CL:0002431,3.82e-07,6;CL:0002432,3.82e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.77e-09!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.07e-13,46 | |||
|phase1_expression=1.60148847104794,1.74487703819681,0.454999239389536,0.30246421130683,1.00179145989269,1.34303417529512,2.10251376535973,5.03580961422147,8.4473233291,9.12851652655775,4.28044920563762,3.11111420081812,10.2720437958723,3.84649770643589,0.999329285446988,2.42970320867791,2.09868563438444,10.4102514568218,4.66189074259512,4.66828616977833,0.340173160604279,3.87234709683453,2.87319768052829,2.71987118748791,2.98232065387321,1.72269589234506,2.58457197695445,2.37018355954478,2.66032787238923,1.26015064879965,1.10865255327652,1.27006134691926,0,0,2.88851619751275,6.31691652362271,4.28755648150975,1.67412652294763,0,1.57057123192139,0.588231488031014,0,0,1.6366586336825,2.23029248682932,2.0190142737785,0,0.218025156380447,0.219686182734472,0,0.419959264876088,0,2.34895648480831,2.17608642603403,4.7053131879945,1.54355661621568,1.43266719969378,2.57836046138721,0.606949382578793,0,0,1.35537812827653,0,0.449949858640699,0,2.8419204597844,0.599200221036809,0,1.45165457231869,1.62007125998029,0.210324961351382,1.14260393761521,0.662605622854841,0.734944795289724,0.670918297127655,0,0,0,0.46081959976873,1.45074916503213,0.823388792421687,0.52091337055676,0.837548997004143,1.68828783009504,0.45839474333043,0.883885756421003,0.284743361598206,1.86399445825301,5.83091688665517,2.26714680320357,3.47837386442013,0.860423876981386,0,1.61910957491345,0.649776417447669,0,0.280888840263504,0.511290967734173,2.59786004602869,2.82671659608272,1.83096445709685,1.28326477414318,2.54805239706646,0,0.649473123033642,0.760079596425296,2.52762222507392,0.11418387971906,0,0,0,2.13125834818499,1.15307748628029,0.301445281105245,0.470354828542819,0,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0.766371165625774,3.23500836165985,4.79922184794726,5.33694953706872,0.299581278809645,0,0.628271760564322,0.521472960576829,0.255715457330331,0.20778804455956,0.324482526135515,0.203678727700633,0.373220911830279,0.758168275301024,0,0.520481771850815,2.29902104433473,0.540186389416048,1.05493372485001,0.204109497453984,0,0.468508622798644,0.517406741478031,0.215567992932842,0.378212160335639,0.879755620819744,1.09597866213787,1.39023624612799,0.696504333044333,1.02891068203972,0,3.51106593656617,2.05878325691772,2.27330799516474,0.828503090142008,0.469052119962192,0.900310307305074,0.946978942340841,0.787056926989615,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0.492502392237286,0.0810688095458557,0.438599962275997,0.219550115291051,0.268412837520744,0,0.205809224758569,0.330418782983798,0.528901133327089,0.853153002140936,0.464473343720877,0.644337306610467,0.403367049246685,0.444756087689741,0.760902504450237,0.949058123089023,1.15289268306808,1.00534083520108,0.198956472041151,0.58489226135736,0,0.216138049874694,0.597423819763102,0.758671603812327,1.37098215131675,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,0.0632365371242573,0.147610147979602,0,0.493588655687202,0.889357881261447,0.500535317148282,0.786235980452812,0.899448449539415,1.21716072833102,0.241177159752417,1.2731292589071,1.43848068725405,0.972811360650212,0.549122826376163,0,0.744281895337007,0,0.505157755894224,0.358794827043824,0.482443521363367,0.554259570499814,1.13694847062291,0.488894929326078,1.35796068620151,2.34690248288502,1.17254380209271,0.714130922658041,0.195133647857799,0.157635144106191,0.44292937929755,0.478364305972461,1.14704320301017,0.518054945597687,0.433947175744535,3.01582567878545,0.54390568381871,0.491764273019036,0.827810238914197,0,0.586058432961016,1.63934945376675,0.252470927204373,0.631016438832513,1.95219372148319,0.646270193198397,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,0.642642632843614,0.141940085208269,0.534196811001766,0.488660878060728,0.164970122972535,1.32745138339963,1.94224508923985,1.209294227859,2.82907619633847,0.885905678642318,1.22974059177571,0.775284879504663,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0.900305470156551,1.16422815404479,0.643011105094777,1.06404140185364,0.535106452806212,0,1.2178597964584,0.704015124191131,0.42366414172764,1.32317038832977,0.32977250588296,0.161464426695906,0.301564624640779,0.596861720015682,0.492422699235184,0.291480836629851,0.370850604021019,0.854354403989263,0.619160603889667,0.555583582109135,0,0,0.457556346413045,3.22959016988325,1.25956307091292,3.45499934511059,0,0.474503990371703,0.609958401380546,0.648032044930808,1.04544148007234,0,0.269728692769641,0.41326727862668,1.04702376793612,0,0.621339313086926,0,0.299033092087958,1.15820943319968,0.583353565032143,1.29159823477731,1.01373675294467,0.352071715937262,0.651021924219751,0.629156066554265,0.241584120826006,0.288030006257865,0.316011120628178,0,1.43795340030758,2.07873316764472,0.537080087002444,0.39736270956253,0.841368146639782,0.738447635872886,0.201932899896295,0.228620419965,0.806609481094724,0.682205165178267,1.05833025804362,0.233753804363138,0,0.665957860122194,2.15313255862742,1.00730769818447,0.965947970160952,0.750729901804728,0.73260649706906,1.71494703263253,0.501572104035363,0,0,0,0.515559547031063,0,0.755393897389701,0,0,0,0,0.726511433089237,0,1.19513524027894,0.729320151204882,0.209613162627982,0.735374033800057,1.11123363900808,1.44224540067226,0.320919209591815,0.758091635291392,0.760437899670719,0.565879024158229,0.561849044819294,0.320125762024346,0.631790158511746,0.476293691283074,1.0429589335037,0.38581844092741,1.64834360321323,0.735994600671987,0.342869252385415,0.70990322463735,0.715308569841963,1.30811774969096,0.188218760830661,0.338458431566706,0.73171189149109,0.789209134313529,0.814824683075171,0,0.474540072496697,0.689531376628944,0.409231043169689,0.154936841185966,1.92906610981141,0.499621155875892,0.467863216890817,0.429742108096597,0.956441660344217,1.32354851471709,0.231867835620421 | |||
|short_description=p1@ENSMUST00000167233 | |||
}} | |||
Revision as of 21:09, 13 September 2013
| Short description: | p1@ENSMUST00000167233 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_ENSMUST00000167233_5end |
| Coexpression cluster: | MCL_coexpression_mm9:672 |
| Association with transcript: | -14bp_to_ENSMUST00000167233_5end |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 1.07e-13 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
