FFCP PHASE1:Mm9::chr2:118423945..118423962,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=12236|HGNC=|MCL_coexpression_id=156|UniProt=Q9Z1S0,Q3UZD6|association_with_transcript=0bp_to_ENSMUST00000038341,NM_009773,uc008lse.2_5end|description=CAGE_peak_3_at_Bub1b_5end|id=chr2:118423945..118423962,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!3.20e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.68e-07,134|phase1_expression=0.160148847104794,0,0,0,0,0.671517087647559,0.934450562382103,0,0,0.234064526321993,0,0,0,0,4.66353666541928,7.28910962603373,4.19737126876888,0.473193248037357,0.959801035240171,0.84877930359606,5.10259740906419,2.18440092641948,2.61199789138935,0.159992422793407,0.68822784320151,0.57423196411502,0.430761996159075,0.215471232685889,0.760093677825496,0.252030129759931,0.443461021310609,1.27006134691926,0.61506478758457,0,2.02196133825892,2.1610503896604,2.04169356262369,1.25559489221072,0,4.18818995179039,1.76469446409304,0.683045484958446,0.485510353031154,0.251793635951155,0.101376931219515,0.183546752161682,0,0.65407546914134,0.219686182734472,0.194429899074283,0.279972843250725,0,0.335565212115473,0.725362142011344,0,0.771778308107841,0.286533439938757,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0.622137673850866,0.540023753326763,0.630974884054146,0,0,0.244981598429908,0.862609239164127,0,0,0,0,0,0.182975287204819,0,0,0,0,0.294628585473668,0.142371680799103,0,0,1.058001841495,0.289864488701678,0,0,0,0,0,0.421333260395256,1.53387290320252,0.259786004602869,0.70667914902068,0.563373679106722,1.28326477414318,0,0,1.73192832808971,2.02687892380079,1.51657333504435,2.05530983494308,1.03575153458869,0.148442139064825,1.21439728736295,0.913396434936424,0.922461989024234,1.20578112442098,0.705532242814229,0.376999773989026,0.247194967734374,0.289198713839823,2.65383165584962,0.808834249737046,3.3126227769059,1.93950101254089,0,0,0,0.766371165625774,1.07833612055328,1.79970819298022,1.65191295194984,0,0,0.502617408451458,0,0,0,0,1.12023300235348,0.995255764880744,0,0.210441855886474,2.60240885925407,1.60931473103431,1.62055916824814,1.65775299619287,0.884474488967262,1.66547836370305,1.3118241438362,0.258703370739016,2.15567992932842,1.89106080167819,1.40760899331159,0.876782929710299,1.39023624612799,0.696504333044333,1.23469281844766,1.59227413454795,2.80885274925294,3.08817488537658,1.70498099637356,2.27838349789052,2.81431271977315,1.80062061461015,2.60419209143731,1.37734962223183,1.85120535464854,1.86027155800326,1.60964040839772,1.86824547787471,1.48103864922132,1.31333971263276,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,0,0.308713837137853,0,0.528901133327089,1.06644125267617,4.18026009348789,3.09281907173024,1.61346819698674,0.889512175379481,1.14135375667535,0.949058123089023,0.164698954724011,0.754005626400808,1.59165177632921,0.974820435595601,0,1.08069024937347,1.1948476395262,2.46568271239006,1.71372768914593,2.25415471346161,1.83286195060783,1.35766741017338,1.26244475802573,0.885311519739602,0.147610147979602,0.156998727841375,0.123397163921801,0,5.33904338291501,3.34150291692445,3.37293168577281,2.43432145666204,2.41177159752417,2.80088436959562,2.01387296215567,1.13494658742525,1.64736847912849,11.5014565221884,1.86070473834252,0.936113019343682,0.505157755894224,0.717589654087649,0.482443521363367,0,1.70542270593436,4.72598431681875,2.54617628662782,2.81628297946203,1.50755631697634,0.952174563544055,0.780534591431195,0.788175720530955,0.44292937929755,0.637819074629948,0.163863314715738,0.690739927463582,0.433947175744535,0,0,0,0.551873492609465,0,0,0.819674726883377,0,0.631016438832513,1.17131623288992,1.50796378412959,1.91175038362042,0,0.566153061577665,1.21443210502468,0.876767573733936,0,0,0.425820255624806,1.42452482933804,0.488660878060728,0.824850614862677,1.32745138339963,1.94224508923985,3.02323556964751,1.13163047853539,1.47650946440386,1.84461088766356,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,3.16255825724996,0,0,1.62054984628179,1.4229455216103,1.28602221018955,1.41872186913819,1.24858172321449,1.15184314421485,0.304464949114599,1.64270195644597,0.42366414172764,0.220528398054962,1.15420377059036,0.484393280087717,1.62844897306021,1.43246812803764,0.328281799490123,0.582961673259701,0,2.9048049735635,1.857481811669,2.59272338317596,4.1441060541032,5.05768642567793,4.57556346413045,1.18984900995699,1.11961161858926,1.52019971184866,0.954670618015114,2.21435195506795,2.43983360552218,2.48412283890143,1.04544148007234,1.09181281873089,1.07891477107857,0.41326727862668,0.785267825952089,1.03691978633434,1.24267862617385,15.2197093444731,1.64468200648377,1.15820943319968,2.13896307178452,1.54991788173277,1.18269287843545,2.46450201156083,1.69265700297135,1.25831213310853,9.90494895386625,7.77681016896237,3.16011120628178,3.24360344464263,2.15693010046137,3.11809975146708,4.29664069601955,2.58285761215644,3.4856680360791,3.98761723371358,4.54349024766664,4.03896075271499,1.81487133246313,2.63136277997332,3.46362629905186,1.5193997283604,0.680191150845634,3.10780334723691,2.42227412845584,2.3503846290971,0.19318959403219,0,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,3.42498247027783,1.19707462020309,1.70733605754134,1.21553358534147,2.93458427679175,1.65459157605013,0.888986911206461,1.44224540067226,1.60459604795908,1.51618327058278,1.52087579934144,1.32038438970253,0.936415074698824,1.15245274328765,1.03383844120104,1.90517476513229,1.27472758539341,0.77163688185482,1.64834360321323,1.91358596174717,1.02860775715625,1.24233064311536,0.715308569841963,0.726732083161643,1.69396884747595,1.4384483341585,1.64635175585495,1.31534855718921,1.22223702461276,0.561142271657738,0.830445126869219,0.985044823755635,2.04615521584845,1.23949472948773,1.54325288784913,0.999242311751784,1.16965804222704,0.859484216193193,0.765153328275374,1.32354851471709,0.927471342481686|short_description=p3@Bub1b}} | ||
|EntrezGene=12236 | |||
|HGNC= | |||
|MCL_coexpression_id=156 | |||
|UniProt=Q9Z1S0,Q3UZD6 | |||
|association_with_transcript=0bp_to_ENSMUST00000038341,NM_009773,uc008lse.2_5end | |||
|description=CAGE_peak_3_at_Bub1b_5end | |||
|id=chr2:118423945..118423962,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!3.20e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.68e-07,134 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.671517087647559,0.934450562382103,0,0,0.234064526321993,0,0,0,0,4.66353666541928,7.28910962603373,4.19737126876888,0.473193248037357,0.959801035240171,0.84877930359606,5.10259740906419,2.18440092641948,2.61199789138935,0.159992422793407,0.68822784320151,0.57423196411502,0.430761996159075,0.215471232685889,0.760093677825496,0.252030129759931,0.443461021310609,1.27006134691926,0.61506478758457,0,2.02196133825892,2.1610503896604,2.04169356262369,1.25559489221072,0,4.18818995179039,1.76469446409304,0.683045484958446,0.485510353031154,0.251793635951155,0.101376931219515,0.183546752161682,0,0.65407546914134,0.219686182734472,0.194429899074283,0.279972843250725,0,0.335565212115473,0.725362142011344,0,0.771778308107841,0.286533439938757,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0.622137673850866,0.540023753326763,0.630974884054146,0,0,0.244981598429908,0.862609239164127,0,0,0,0,0,0.182975287204819,0,0,0,0,0.294628585473668,0.142371680799103,0,0,1.058001841495,0.289864488701678,0,0,0,0,0,0.421333260395256,1.53387290320252,0.259786004602869,0.70667914902068,0.563373679106722,1.28326477414318,0,0,1.73192832808971,2.02687892380079,1.51657333504435,2.05530983494308,1.03575153458869,0.148442139064825,1.21439728736295,0.913396434936424,0.922461989024234,1.20578112442098,0.705532242814229,0.376999773989026,0.247194967734374,0.289198713839823,2.65383165584962,0.808834249737046,3.3126227769059,1.93950101254089,0,0,0,0.766371165625774,1.07833612055328,1.79970819298022,1.65191295194984,0,0,0.502617408451458,0,0,0,0,1.12023300235348,0.995255764880744,0,0.210441855886474,2.60240885925407,1.60931473103431,1.62055916824814,1.65775299619287,0.884474488967262,1.66547836370305,1.3118241438362,0.258703370739016,2.15567992932842,1.89106080167819,1.40760899331159,0.876782929710299,1.39023624612799,0.696504333044333,1.23469281844766,1.59227413454795,2.80885274925294,3.08817488537658,1.70498099637356,2.27838349789052,2.81431271977315,1.80062061461015,2.60419209143731,1.37734962223183,1.85120535464854,1.86027155800326,1.60964040839772,1.86824547787471,1.48103864922132,1.31333971263276,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,0,0.308713837137853,0,0.528901133327089,1.06644125267617,4.18026009348789,3.09281907173024,1.61346819698674,0.889512175379481,1.14135375667535,0.949058123089023,0.164698954724011,0.754005626400808,1.59165177632921,0.974820435595601,0,1.08069024937347,1.1948476395262,2.46568271239006,1.71372768914593,2.25415471346161,1.83286195060783,1.35766741017338,1.26244475802573,0.885311519739602,0.147610147979602,0.156998727841375,0.123397163921801,0,5.33904338291501,3.34150291692445,3.37293168577281,2.43432145666204,2.41177159752417,2.80088436959562,2.01387296215567,1.13494658742525,1.64736847912849,11.5014565221884,1.86070473834252,0.936113019343682,0.505157755894224,0.717589654087649,0.482443521363367,0,1.70542270593436,4.72598431681875,2.54617628662782,2.81628297946203,1.50755631697634,0.952174563544055,0.780534591431195,0.788175720530955,0.44292937929755,0.637819074629948,0.163863314715738,0.690739927463582,0.433947175744535,0,0,0,0.551873492609465,0,0,0.819674726883377,0,0.631016438832513,1.17131623288992,1.50796378412959,1.91175038362042,0,0.566153061577665,1.21443210502468,0.876767573733936,0,0,0.425820255624806,1.42452482933804,0.488660878060728,0.824850614862677,1.32745138339963,1.94224508923985,3.02323556964751,1.13163047853539,1.47650946440386,1.84461088766356,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,3.16255825724996,0,0,1.62054984628179,1.4229455216103,1.28602221018955,1.41872186913819,1.24858172321449,1.15184314421485,0.304464949114599,1.64270195644597,0.42366414172764,0.220528398054962,1.15420377059036,0.484393280087717,1.62844897306021,1.43246812803764,0.328281799490123,0.582961673259701,0,2.9048049735635,1.857481811669,2.59272338317596,4.1441060541032,5.05768642567793,4.57556346413045,1.18984900995699,1.11961161858926,1.52019971184866,0.954670618015114,2.21435195506795,2.43983360552218,2.48412283890143,1.04544148007234,1.09181281873089,1.07891477107857,0.41326727862668,0.785267825952089,1.03691978633434,1.24267862617385,15.2197093444731,1.64468200648377,1.15820943319968,2.13896307178452,1.54991788173277,1.18269287843545,2.46450201156083,1.69265700297135,1.25831213310853,9.90494895386625,7.77681016896237,3.16011120628178,3.24360344464263,2.15693010046137,3.11809975146708,4.29664069601955,2.58285761215644,3.4856680360791,3.98761723371358,4.54349024766664,4.03896075271499,1.81487133246313,2.63136277997332,3.46362629905186,1.5193997283604,0.680191150845634,3.10780334723691,2.42227412845584,2.3503846290971,0.19318959403219,0,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,3.42498247027783,1.19707462020309,1.70733605754134,1.21553358534147,2.93458427679175,1.65459157605013,0.888986911206461,1.44224540067226,1.60459604795908,1.51618327058278,1.52087579934144,1.32038438970253,0.936415074698824,1.15245274328765,1.03383844120104,1.90517476513229,1.27472758539341,0.77163688185482,1.64834360321323,1.91358596174717,1.02860775715625,1.24233064311536,0.715308569841963,0.726732083161643,1.69396884747595,1.4384483341585,1.64635175585495,1.31534855718921,1.22223702461276,0.561142271657738,0.830445126869219,0.985044823755635,2.04615521584845,1.23949472948773,1.54325288784913,0.999242311751784,1.16965804222704,0.859484216193193,0.765153328275374,1.32354851471709,0.927471342481686 | |||
|short_description=p3@Bub1b | |||
}} | |||
Revision as of 21:44, 13 September 2013
| Short description: | p3@Bub1b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Bub1b_5end |
| Coexpression cluster: | MCL_coexpression_mm9:156 |
| Association with transcript: | 0bp_to_ENSMUST00000038341, NM_009773, uc008lse.2_5end |
| EntrezGene: | Bub1b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| primordium | 1.68e-07 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
