FFCP PHASE1:Mm9::chr2:164705516..164705539,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=228866|HGNC=|UniProt=|association_with_transcript=-12bp_to_ENSMUST00000122810_5end|description=CAGE_peak_2_at_Pcif1_5end|id=chr2:164705516..164705539,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.93e-08!51;UBERON:0005256!2.52e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0005256,5.33e-09,45;UBERON:0007023,7.97e-07,51;UBERON:0009854,8.59e-07,23;UBERON:0009856,8.59e-07,23|phase1_expression=0.80074423552397,1.04692622291808,1.36499771816861,2.11724947914781,2.00358291978539,0.503637815735669,0.467225281191051,3.35720640948098,0.985521055061667,0.468129052643987,0.34243593645101,0.159544317990673,2.56801094896809,2.18551006047494,1.33243904726265,1.41732687172878,1.39912375625629,3.78554598429885,1.7824876368746,4.2438965179803,1.36069264241712,0.794327609607082,1.56719873483361,0.799962113967033,2.06468352960453,1.72269589234506,0.430761996159075,1.07735616342945,1.90023419456374,2.77233142735924,1.99557459589774,0,0,0,2.59966457776147,1.16364251750945,0.816677425049476,5.85944283031671,6.2506827561904,3.66466620781659,8.2352408324342,8.87959130445979,4.85510353031154,2.89562681343828,2.53442328048786,2.38610777810186,8.60630478782843,2.39827672018491,4.83309602015838,4.08302788055995,2.93971485413261,2.87505128729943,2.34895648480831,1.45072428402269,1.34437519656986,0.257259436035947,0.286533439938757,3.09403255366465,0,0.528990979272033,0,1.0165335962074,1.77858959222228,3.1496490104849,1.97773272513395,3.5524005747305,2.99600110518405,3.45796474789399,0.311068836925433,0,0.210324961351382,0.285650984403804,1.54607978666129,0.122490799214954,0.0958454710182364,1.83843757322004,2.20231761998777,1.0214987046815,0.921639199537461,0.395658863190582,0.274462930807229,0,0.279182999001381,0.56276261003168,1.06958773443767,0,0,0.186399445825301,1.13589289999776,1.13357340160178,3.47837386442013,5.16254326188832,0.679971333707751,2.15881276655127,3.89865850468601,4.03224198387602,1.12355536105401,1.36344258062446,1.81850203222008,2.12003744706204,0.985903938436763,0,0,0,1.08245520505607,0.253359865475099,0.505524445014783,1.94112595522402,2.07150306917737,1.03909497345377,0.173485326766136,0.913396434936424,1.38369298353635,0.753613202763113,1.88141931417128,1.25666591329675,2.71914464507811,2.31358971071859,0.884610551949874,1.29413479957927,1.10420759230197,1.45462575940567,3.72783522436244,0.878342391034642,1.04723353406728,1.27728527604296,0.718890747035522,1.19980546198682,0.635351135365324,1.64769703345305,3.20250421973039,0.125654352112864,1.73824320192276,1.53429274398198,2.0778804455956,1.62241263067758,0.407357455401265,2.48813941220186,8.33985102831127,2.52530227063769,0.910843100738926,0.689706313300419,0.540186389416048,0.60281927134286,0.612328492361951,0.640568601424249,0.843315521037559,1.55222022443409,0.862271971731369,0,1.05570674498369,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0.59710280045548,0.702213187313235,0,0.852490498186778,0.828503090142008,1.17263029990548,0.180062061461015,0.23674473558521,0.393528463494808,0.617068451549513,0.465067889500816,0.536546802799238,0,0.493679549740441,0.820837320395476,0.648550476366846,0.292399974850665,0.658650345873152,0.536825675041487,1.05144974282064,0.514523061896422,1.98251269790279,1.05780226665418,0.426576501070468,0.464473343720877,0.515469845288373,0.605050573870028,0.667134131534611,0.760902504450237,0.949058123089023,1.15289268306808,0.251335208800269,1.98956472041151,1.75467678407208,0,2.37751854862164,3.38540164532424,0.948339504765408,0.571242563048644,0,0.407302655690628,0.969762435838129,0.631222379012867,1.07502113111237,2.80459281161244,1.09899109488962,2.22114895059241,4.15033677922008,1.66845105716094,1.96558995113203,1.12431056192427,2.23146133527353,0.482354319504834,1.78238096246994,2.01387296215567,2.43202840162553,1.37280706594041,0,0.744281895337007,3.43241440426017,2.52578877947112,3.04975602987251,7.23665282045051,2.03228509183265,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,1.19021820443007,0.390267295715598,0.630540576424764,0.8858587585951,0.159454768657487,1.63863314715738,0.863424909329478,2.16973587872267,0,1.63171705145613,0.491764273019036,2.48343071674259,2.72936002979246,1.28932855251423,0.327869890753351,0.504941854408746,0.315508219416257,0.780877488593277,1.07711698866399,0,0.891194696329576,1.13230612315533,0.809621403349789,0.292255857911312,0,0.321321316421807,0.99358059645788,0.178065603667255,0.81443479676788,1.97964147567043,1.32745138339963,1.45668381692989,0.302323556964751,0.754420319023592,1.18120757152309,0.307435147943927,0.516856586336442,1.45413491791002,1.06949213515416,1.26414703174326,3.16255825724996,1.03135543248187,6.80879211507576,1.44048875225048,0.776152102696527,0.857348140126369,0.886701168211368,1.24858172321449,2.30368628842969,4.87143918583359,0.938686832254841,7.41412248023371,3.74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| ||
|EntrezGene=228866 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENSMUST00000122810_5end | |||
|description=CAGE_peak_2_at_Pcif1_5end | |||
|id=chr2:164705516..164705539,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.93e-08!51;UBERON:0005256!2.52e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,5.33e-09,45;UBERON:0007023,7.97e-07,51;UBERON:0009854,8.59e-07,23;UBERON:0009856,8.59e-07,23 | |||
|phase1_expression=0.80074423552397,1.04692622291808,1.36499771816861,2.11724947914781,2.00358291978539,0.503637815735669,0.467225281191051,3.35720640948098,0.985521055061667,0.468129052643987,0.34243593645101,0.159544317990673,2.56801094896809,2.18551006047494,1.33243904726265,1.41732687172878,1.39912375625629,3.78554598429885,1.7824876368746,4.2438965179803,1.36069264241712,0.794327609607082,1.56719873483361,0.799962113967033,2.06468352960453,1.72269589234506,0.430761996159075,1.07735616342945,1.90023419456374,2.77233142735924,1.99557459589774,0,0,0,2.59966457776147,1.16364251750945,0.816677425049476,5.85944283031671,6.2506827561904,3.66466620781659,8.2352408324342,8.87959130445979,4.85510353031154,2.89562681343828,2.53442328048786,2.38610777810186,8.60630478782843,2.39827672018491,4.83309602015838,4.08302788055995,2.93971485413261,2.87505128729943,2.34895648480831,1.45072428402269,1.34437519656986,0.257259436035947,0.286533439938757,3.09403255366465,0,0.528990979272033,0,1.0165335962074,1.77858959222228,3.1496490104849,1.97773272513395,3.5524005747305,2.99600110518405,3.45796474789399,0.311068836925433,0,0.210324961351382,0.285650984403804,1.54607978666129,0.122490799214954,0.0958454710182364,1.83843757322004,2.20231761998777,1.0214987046815,0.921639199537461,0.395658863190582,0.274462930807229,0,0.279182999001381,0.56276261003168,1.06958773443767,0,0,0.186399445825301,1.13589289999776,1.13357340160178,3.47837386442013,5.16254326188832,0.679971333707751,2.15881276655127,3.89865850468601,4.03224198387602,1.12355536105401,1.36344258062446,1.81850203222008,2.12003744706204,0.985903938436763,0,0,0,1.08245520505607,0.253359865475099,0.505524445014783,1.94112595522402,2.07150306917737,1.03909497345377,0.173485326766136,0.913396434936424,1.38369298353635,0.753613202763113,1.88141931417128,1.25666591329675,2.71914464507811,2.31358971071859,0.884610551949874,1.29413479957927,1.10420759230197,1.45462575940567,3.72783522436244,0.878342391034642,1.04723353406728,1.27728527604296,0.718890747035522,1.19980546198682,0.635351135365324,1.64769703345305,3.20250421973039,0.125654352112864,1.73824320192276,1.53429274398198,2.0778804455956,1.62241263067758,0.407357455401265,2.48813941220186,8.33985102831127,2.52530227063769,0.910843100738926,0.689706313300419,0.540186389416048,0.60281927134286,0.612328492361951,0.640568601424249,0.843315521037559,1.55222022443409,0.862271971731369,0,1.05570674498369,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0.59710280045548,0.702213187313235,0,0.852490498186778,0.828503090142008,1.17263029990548,0.180062061461015,0.23674473558521,0.393528463494808,0.617068451549513,0.465067889500816,0.536546802799238,0,0.493679549740441,0.820837320395476,0.648550476366846,0.292399974850665,0.658650345873152,0.536825675041487,1.05144974282064,0.514523061896422,1.98251269790279,1.05780226665418,0.426576501070468,0.464473343720877,0.515469845288373,0.605050573870028,0.667134131534611,0.760902504450237,0.949058123089023,1.15289268306808,0.251335208800269,1.98956472041151,1.75467678407208,0,2.37751854862164,3.38540164532424,0.948339504765408,0.571242563048644,0,0.407302655690628,0.969762435838129,0.631222379012867,1.07502113111237,2.80459281161244,1.09899109488962,2.22114895059241,4.15033677922008,1.66845105716094,1.96558995113203,1.12431056192427,2.23146133527353,0.482354319504834,1.78238096246994,2.01387296215567,2.43202840162553,1.37280706594041,0,0.744281895337007,3.43241440426017,2.52578877947112,3.04975602987251,7.23665282045051,2.03228509183265,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,1.19021820443007,0.390267295715598,0.630540576424764,0.8858587585951,0.159454768657487,1.63863314715738,0.863424909329478,2.16973587872267,0,1.63171705145613,0.491764273019036,2.48343071674259,2.72936002979246,1.28932855251423,0.327869890753351,0.504941854408746,0.315508219416257,0.780877488593277,1.07711698866399,0,0.891194696329576,1.13230612315533,0.809621403349789,0.292255857911312,0,0.321321316421807,0.99358059645788,0.178065603667255,0.81443479676788,1.97964147567043,1.32745138339963,1.45668381692989,0.302323556964751,0.754420319023592,1.18120757152309,0.307435147943927,0.516856586336442,1.45413491791002,1.06949213515416,1.26414703174326,3.16255825724996,1.03135543248187,6.80879211507576,1.44048875225048,0.776152102696527,0.857348140126369,0.886701168211368,1.24858172321449,2.30368628842969,4.87143918583359,0.938686832254841,7.41412248023371,3.74898276693435,1.97863503529776,1.29171541356724,0.603129249281559,0.358117032009409,0.164140899745061,1.1659233465194,1.29797711407357,1.70870880797853,1.03193433981611,1.66675074632741,2.82552685507037,2.05041341581538,1.60144721244566,0.509935289981566,2.09927178485487,0.690999869022119,1.90934123603023,0.158167996790568,0.406638934253697,0.324016022465404,0.209088296014469,0.655087691238533,0.539457385539283,0.743881101528023,0.523511883968059,3.75883422546199,3.10669656543463,3.94585057078933,0.598066184175915,0.496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| |||
|short_description=p2@Pcif1 | |||
}} | |||
Revision as of 22:55, 13 September 2013
| Short description: | p2@Pcif1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Pcif1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -12bp_to_ENSMUST00000122810_5end |
| EntrezGene: | Pcif1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| trunk mesenchyme | 5.33e-09 | 45 |
| adult organism | 7.97e-07 | 51 |
| digestive tract diverticulum | 8.59e-07 | 23 |
| sac | 8.59e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
