FFCP PHASE1:Mm9::chr2:181502048..181502090,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1137|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:181502048..181502090,+|id=chr2:181502048..181502090,+|ontology_enrichment_celltype=CL:0000540!2.83e-13!33;CL:0000047!2.83e-13!33;CL:0000031!2.83e-13!33;CL:0000404!2.83e-13!33;CL:0000393!8.56e-10!39;CL:0000211!8.56e-10!39;CL:0000117!1.25e-08!23;CL:0000337!1.25e-08!23;CL:0000221!1.29e-08!44;CL:0000133!1.29e-08!44;CL:0002319!4.52e-08!43;CL:0002609!6.88e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,7.53e-14,6;CL:0000117,2.90e-12,23;CL:0000337,2.90e-12,23;CL:0000120,5.21e-10,3;CL:0000540,9.17e-10,33;CL:0000047,9.17e-10,33;CL:0000031,9.17e-10,33;CL:0000404,9.17e-10,33;CL:0000393,5.92e-08,39;CL:0000211,5.92e-08,39;CL:0002319,4.97e-07,43;CL:0000221,7.95e-07,44;CL:0000133,7.95e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.65e-16!71;UBERON:0003075!4.65e-16!71;UBERON:0007284!4.65e-16!71;UBERON:0004121!2.18e-15!102;UBERON:0000924!2.18e-15!102;UBERON:0006601!2.18e-15!102;UBERON:0003056!3.29e-14!49;UBERON:0000033!1.55e-13!63;UBERON:0001017!7.98e-13!73;UBERON:0005743!7.98e-13!73;UBERON:0000073!4.41e-12!75;UBERON:0001016!4.41e-12!75;UBERON:0001049!3.93e-09!52;UBERON:0005068!3.93e-09!52;UBERON:0006241!3.93e-09!52;UBERON:0007135!3.93e-09!52;UBERON:0003080!1.18e-08!40;UBERON:0002780!1.90e-08!39;UBERON:0001890!1.90e-08!39;UBERON:0006240!1.90e-08!39;UBERON:0002616!2.48e-08!49;UBERON:0000020!2.49e-08!12;UBERON:0001032!2.49e-08!12;UBERON:0004456!2.49e-08!12;UBERON:0000955!5.59e-08!50;UBERON:0006238!5.59e-08!50;UBERON:0000970!7.08e-08!9;UBERON:0000019!7.08e-08!9;UBERON:0000047!7.08e-08!9;UBERON:0004088!7.08e-08!9;UBERON:0002104!7.08e-08!9;UBERON:0001456!7.08e-08!9;UBERON:0003072!7.08e-08!9;UBERON:0003071!7.08e-08!9;UBERON:0004128!7.08e-08!9;UBERON:0005085!2.10e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.11e-22,49;UBERON:0002346,2.71e-18,64;UBERON:0003075,2.71e-18,64;UBERON:0007284,2.71e-18,64;UBERON:0010371,2.74e-17,73;UBERON:0004121,9.16e-17,95;UBERON:0000924,9.16e-17,95;UBERON:0006601,9.16e-17,95;UBERON:0000007,2.46e-14,8;UBERON:0003296,2.46e-14,8;UBERON:0010133,2.46e-14,8;UBERON:0002780,1.55e-13,39;UBERON:0001890,1.55e-13,39;UBERON:0006240,1.55e-13,39;UBERON:0003080,3.98e-13,40;UBERON:0010314,7.98e-13,92;UBERON:0002616,8.66e-13,46;UBERON:0000970,1.23e-12,9;UBERON:0000019,1.23e-12,9;UBERON:0000047,1.23e-12,9;UBERON:0010312,1.23e-12,9;UBERON:0004088,1.23e-12,9;UBERON:0002104,1.23e-12,9;UBERON:0001456,1.23e-12,9;UBERON:0003072,1.23e-12,9;UBERON:0004128,1.23e-12,9;UBERON:0003071,1.23e-12,9;UBERON:0000020,1.72e-12,12;UBERON:0001032,1.72e-12,12;UBERON:0004456,1.72e-12,12;UBERON:0000955,1.88e-12,47;UBERON:0006238,1.88e-12,47;UBERON:0001017,4.27e-12,73;UBERON:0001016,1.13e-11,75;UBERON:0000033,1.85e-11,13;UBERON:0005085,1.85e-11,13;UBERON:0001894,2.38e-11,10;UBERON:0006222,2.38e-11,10;UBERON:0001049,5.76e-11,52;UBERON:0005068,5.76e-11,52;UBERON:0006241,5.76e-11,52;UBERON:0007135,5.76e-11,52;UBERON:0000073,1.90e-10,54;UBERON:0001444,3.14e-10,11|phase1_expression=1.44133962394315,0,0,0,0,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,1.8664130215526,1.35005938331691,1.47227472945967,0,0,2.20483438586917,3.64212789869298,0.919218786610021,0,0.127687338085188,0,1.05509030184155,1.46380229763855,0.52091337055676,0,0,0.916789486660861,0.294628585473668,0.711858403995515,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0.913396434936424,0.461230994512117,0.60289056221049,0.470354828542819,0,0,0,0,0,0,0,0,1.17112318804619,0.83778682725382,0.510914110417183,0,0,0,0.149790639404823,0,1.13088916901578,0,0.255715457330331,0,0.324482526135515,0,0,0,0.210441855886474,0.260240885925407,2.98872735763515,2.34080768746954,1.05493372485001,0.680364991513279,2.17793324484245,1.40552586839593,1.55222022443409,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.234423373184406,0,0,0.94652465824877,0,0.646270193198397,0.238968797952552,0.222798674082394,0.849229592366497,0.809621403349789,0.876767573733936,0.790575555893047,0,0,0,0,0,0,0.728341908464944,0.604647113929502,0.188605079755898,0.590603785761546,0.922305443831782,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,0,3.06395645178409,0.720244376125241,1.16422815404479,0,1.24138163549592,1.78368817602071,2.46823530903181,1.8267896946876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.540026704109006,0.209088296014469,0,0,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0,0,0,1.97195960409936,3.59122386060928,1.70733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0,0.50695859978048,0,0.280924522409647,0.384150914429216,0.229741875822453,0.476293691283074,0.231768651889711,0.38581844092741,0,0.147198920134397,0.685738504770831,0,0.715308569841963,0.290692833264657,0.282328141245992,0,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.29551344712669,0.818462086339379,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0.191288332068843,0,0|short_description=p@chr2:181502048..181502090,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1137 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:181502048..181502090,+ | |||
|id=chr2:181502048..181502090,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.83e-13!33;CL:0000047!2.83e-13!33;CL:0000031!2.83e-13!33;CL:0000404!2.83e-13!33;CL:0000393!8.56e-10!39;CL:0000211!8.56e-10!39;CL:0000117!1.25e-08!23;CL:0000337!1.25e-08!23;CL:0000221!1.29e-08!44;CL:0000133!1.29e-08!44;CL:0002319!4.52e-08!43;CL:0002609!6.88e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,7.53e-14,6;CL:0000117,2.90e-12,23;CL:0000337,2.90e-12,23;CL:0000120,5.21e-10,3;CL:0000540,9.17e-10,33;CL:0000047,9.17e-10,33;CL:0000031,9.17e-10,33;CL:0000404,9.17e-10,33;CL:0000393,5.92e-08,39;CL:0000211,5.92e-08,39;CL:0002319,4.97e-07,43;CL:0000221,7.95e-07,44;CL:0000133,7.95e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.65e-16!71;UBERON:0003075!4.65e-16!71;UBERON:0007284!4.65e-16!71;UBERON:0004121!2.18e-15!102;UBERON:0000924!2.18e-15!102;UBERON:0006601!2.18e-15!102;UBERON:0003056!3.29e-14!49;UBERON:0000033!1.55e-13!63;UBERON:0001017!7.98e-13!73;UBERON:0005743!7.98e-13!73;UBERON:0000073!4.41e-12!75;UBERON:0001016!4.41e-12!75;UBERON:0001049!3.93e-09!52;UBERON:0005068!3.93e-09!52;UBERON:0006241!3.93e-09!52;UBERON:0007135!3.93e-09!52;UBERON:0003080!1.18e-08!40;UBERON:0002780!1.90e-08!39;UBERON:0001890!1.90e-08!39;UBERON:0006240!1.90e-08!39;UBERON:0002616!2.48e-08!49;UBERON:0000020!2.49e-08!12;UBERON:0001032!2.49e-08!12;UBERON:0004456!2.49e-08!12;UBERON:0000955!5.59e-08!50;UBERON:0006238!5.59e-08!50;UBERON:0000970!7.08e-08!9;UBERON:0000019!7.08e-08!9;UBERON:0000047!7.08e-08!9;UBERON:0004088!7.08e-08!9;UBERON:0002104!7.08e-08!9;UBERON:0001456!7.08e-08!9;UBERON:0003072!7.08e-08!9;UBERON:0003071!7.08e-08!9;UBERON:0004128!7.08e-08!9;UBERON:0005085!2.10e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.11e-22,49;UBERON:0002346,2.71e-18,64;UBERON:0003075,2.71e-18,64;UBERON:0007284,2.71e-18,64;UBERON:0010371,2.74e-17,73;UBERON:0004121,9.16e-17,95;UBERON:0000924,9.16e-17,95;UBERON:0006601,9.16e-17,95;UBERON:0000007,2.46e-14,8;UBERON:0003296,2.46e-14,8;UBERON:0010133,2.46e-14,8;UBERON:0002780,1.55e-13,39;UBERON:0001890,1.55e-13,39;UBERON:0006240,1.55e-13,39;UBERON:0003080,3.98e-13,40;UBERON:0010314,7.98e-13,92;UBERON:0002616,8.66e-13,46;UBERON:0000970,1.23e-12,9;UBERON:0000019,1.23e-12,9;UBERON:0000047,1.23e-12,9;UBERON:0010312,1.23e-12,9;UBERON:0004088,1.23e-12,9;UBERON:0002104,1.23e-12,9;UBERON:0001456,1.23e-12,9;UBERON:0003072,1.23e-12,9;UBERON:0004128,1.23e-12,9;UBERON:0003071,1.23e-12,9;UBERON:0000020,1.72e-12,12;UBERON:0001032,1.72e-12,12;UBERON:0004456,1.72e-12,12;UBERON:0000955,1.88e-12,47;UBERON:0006238,1.88e-12,47;UBERON:0001017,4.27e-12,73;UBERON:0001016,1.13e-11,75;UBERON:0000033,1.85e-11,13;UBERON:0005085,1.85e-11,13;UBERON:0001894,2.38e-11,10;UBERON:0006222,2.38e-11,10;UBERON:0001049,5.76e-11,52;UBERON:0005068,5.76e-11,52;UBERON:0006241,5.76e-11,52;UBERON:0007135,5.76e-11,52;UBERON:0000073,1.90e-10,54;UBERON:0001444,3.14e-10,11 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,1.8664130215526,1.35005938331691,1.47227472945967,0,0,2.20483438586917,3.64212789869298,0.919218786610021,0,0.127687338085188,0,1.05509030184155,1.46380229763855,0.52091337055676,0,0,0.916789486660861,0.294628585473668,0.711858403995515,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0.913396434936424,0.461230994512117,0.60289056221049,0.470354828542819,0,0,0,0,0,0,0,0,1.17112318804619,0.83778682725382,0.510914110417183,0,0,0,0.149790639404823,0,1.13088916901578,0,0.255715457330331,0,0.324482526135515,0,0,0,0.210441855886474,0.260240885925407,2.98872735763515,2.34080768746954,1.05493372485001,0.680364991513279,2.17793324484245,1.40552586839593,1.55222022443409,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.234423373184406,0,0,0.94652465824877,0,0.646270193198397,0.238968797952552,0.222798674082394,0.849229592366497,0.809621403349789,0.876767573733936,0.790575555893047,0,0,0,0,0,0,0.728341908464944,0.604647113929502,0.188605079755898,0.590603785761546,0.922305443831782,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,0,3.06395645178409,0.720244376125241,1.16422815404479,0,1.24138163549592,1.78368817602071,2.46823530903181,1.8267896946876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.540026704109006,0.209088296014469,0,0,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0,0,0,1.97195960409936,3.59122386060928,1.70733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0,0.50695859978048,0,0.280924522409647,0.384150914429216,0.229741875822453,0.476293691283074,0.231768651889711,0.38581844092741,0,0.147198920134397,0.685738504770831,0,0.715308569841963,0.290692833264657,0.282328141245992,0,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.29551344712669,0.818462086339379,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0.191288332068843,0,0 | |||
|short_description=p@chr2:181502048..181502090,+ | |||
}} |
Revision as of 23:17, 13 September 2013
Short description: | p@chr2:181502048..181502090, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:181502048..181502090, + |
Coexpression cluster: | MCL_coexpression_mm9:1137 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 7.53e-14 | 6 |
CNS neuron (sensu Vertebrata) | 2.90e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.90e-12 | 23 |
granule cell | 5.21e-10 | 3 |
neuron | 9.17e-10 | 33 |
neuronal stem cell | 9.17e-10 | 33 |
neuroblast | 9.17e-10 | 33 |
electrically signaling cell | 9.17e-10 | 33 |
electrically responsive cell | 5.92e-08 | 39 |
electrically active cell | 5.92e-08 | 39 |
neural cell | 4.97e-07 | 43 |
ectodermal cell | 7.95e-07 | 44 |
neurectodermal cell | 7.95e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.