FFCP PHASE1:Mm9::chr3:107820795..107820802,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14862|HGNC=|UniProt=A2AE89|association_with_transcript=-71bp_to_ENSMUST00000126593_5end|description=CAGE_peak_3_at_Gstm1_5end|id=chr3:107820795..107820802,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.15e-10!23;UBERON:0001009!1.15e-10!23;UBERON:0004111!1.09e-09!122;UBERON:0007100!1.41e-08!18;UBERON:0000948!1.41e-08!18;UBERON:0005498!1.41e-08!18;UBERON:0004140!1.41e-08!18;UBERON:0009881!1.41e-08!18;UBERON:0004141!1.41e-08!18;UBERON:0003084!1.41e-08!18;UBERON:0007005!1.41e-08!18;UBERON:0004139!1.41e-08!18;UBERON:0004291!1.41e-08!18;UBERON:0000025!7.18e-08!114|ontology_enrichment_uberon_v019_2=UBERON:0004535,9.40e-11,23;UBERON:0001009,9.40e-11,23;UBERON:0004111,1.58e-09,122;UBERON:0007100,1.20e-08,18;UBERON:0000948,1.20e-08,18;UBERON:0005498,1.20e-08,18;UBERON:0004140,1.20e-08,18;UBERON:0009881,1.20e-08,18;UBERON:0004141,1.20e-08,18;UBERON:0003084,1.20e-08,18;UBERON:0007005,1.20e-08,18;UBERON:0004139,1.20e-08,18;UBERON:0004291,1.20e-08,18;UBERON:0010314,1.44e-08,92;UBERON:0000025,1.02e-07,114|phase1_expression=3.84357233051505,0.697950815278722,0.909998478779072,0.30246421130683,1.50268718983904,1.51091344720701,1.63528848416868,0.258246646883153,0,0,0,0.0797721589953364,0,0.174840804837995,0,0.202475267389826,0,0.473193248037357,0,0,1.44573593256819,0.397163804803541,0.261199789138935,2.3998863419011,1.60586496747019,0.57423196411502,0.86152399231815,1.07735616342945,1.52018735565099,1.51218077855958,1.77384408524244,0.635030673459631,0,0,3.46621943701529,3.32469290716985,2.04169356262369,1.25559489221072,2.3440060335714,2.09409497589519,0.588231488031014,0.683045484958446,0,4.15459499319405,3.95370031756107,2.9367480345869,3.9119567217402,3.92445281484804,5.93152693383074,2.52758868796568,3.3596741190087,4.31257693094915,0.335565212115473,0,0,4.63066984864705,2.86533439938757,3.6097046459421,1.01158230429799,0.528990979272033,0,3.38844532069132,1.77858959222228,3.5995988691256,8.89979726310277,4.9733608046227,3.89480143673926,5.37905627450176,1.76272340924412,2.02508907497536,2.3135745748652,1.71390590642282,3.75476519617743,2.08234358665422,1.62937300731002,3.67687514644008,3.30347642998166,2.68143409978894,2.4577045320999,1.31886287730194,1.64677758484337,0.52091337055676,2.51264699101243,2.8138130501584,2.29197371665215,2.35702868378934,1.70846016958924,1.86399445825301,0.37863096666592,2.19157524309678,3.76823835312181,3.44169550792555,1.3599426674155,1.61910957491345,1.29955283489534,3.58421509677868,4.21333260395256,3.40860645156115,2.85764605063156,2.47337702157238,2.95771181531029,3.84979432242953,2.54805239706646,0,1.5154372870785,0.760079596425296,0,1.82694207550496,1.29468941823586,4.30482203287992,2.25530924795977,3.95805121805784,3.45923245884088,2.86373017049983,3.29248379979973,5.02666365318702,3.46072954828123,4.48258006451726,1.76922110389975,1.94120219936891,1.76673214768315,0,1.86391761218122,2.92780797011547,2.51336048176146,1.53274233125155,3.23500836165985,4.19931911695385,4.57452817463033,4.34392854273986,2.74500361691176,3.26701315493447,1.73824320192276,2.04572365864264,2.70124457927428,1.94689515681309,2.74966282395854,1.8661045591514,2.52722758433675,0.841767423545896,3.513251959993,2.29902104433473,2.16074555766419,2.26057226753573,2.4493139694478,2.94661556655154,2.24884138943349,1.29351685369508,1.07783996466421,2.08016688184601,1.58356011747554,1.09597866213787,3.05851974148158,2.78601733217733,4.52720700097476,1.79130840136644,2.1066395619397,1.80143534980301,5.96743348730745,2.89976081549703,3.75241695969754,2.16074473753218,4.26140524053378,4.32881309844288,3.85667782218446,3.72054311600653,6.43856163359086,4.2035523252181,2.79751744852917,3.94001913789829,4.05344047729279,5.11699955988663,7.46470391989572,6.1734952629771,1.26173969138476,3.08713837137853,0,0.528901133327089,2.98603550749328,2.32236671860439,3.22168653305233,2.01683524623343,2.2237804384487,1.33157938278791,2.84717436926707,1.81168850196412,1.50801125280162,1.98956472041151,2.33956904542944,0.898819408654221,2.16138049874694,1.99141273254367,1.32767530667157,2.05647322697512,0,2.64746726198909,2.32742984601151,2.17421041659988,1.83385957660346,2.80459281161244,2.35498091762062,2.59134044235781,2.37162101669719,0.500535317148282,1.37591296579242,0.449724224769707,0.608580364165509,0.964708639009667,0.763877555344259,0.575392274901621,1.29708181420028,2.47105271869273,1.43768206527355,2.23284568601102,3.12037673114561,3.28352541331245,2.69096120282868,1.92977408545347,2.58654466233247,1.89491411770485,2.44447464663039,2.03694102930226,3.52035372432753,3.01511263395268,5.2369600994923,0.390267295715598,1.41871629695572,4.4292937929755,3.50800491046472,3.27726629431476,2.76295970985433,3.90552458170081,0,3.26343410291226,2.45882136509518,0.827810238914197,3.21101179975584,1.87538698547525,4.75411341592359,6.81671503451807,0.631016438832513,0.780877488593277,2.58508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| ||
|EntrezGene=14862 | |||
|HGNC= | |||
|UniProt=A2AE89 | |||
|association_with_transcript=-71bp_to_ENSMUST00000126593_5end | |||
|description=CAGE_peak_3_at_Gstm1_5end | |||
|id=chr3:107820795..107820802,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.15e-10!23;UBERON:0001009!1.15e-10!23;UBERON:0004111!1.09e-09!122;UBERON:0007100!1.41e-08!18;UBERON:0000948!1.41e-08!18;UBERON:0005498!1.41e-08!18;UBERON:0004140!1.41e-08!18;UBERON:0009881!1.41e-08!18;UBERON:0004141!1.41e-08!18;UBERON:0003084!1.41e-08!18;UBERON:0007005!1.41e-08!18;UBERON:0004139!1.41e-08!18;UBERON:0004291!1.41e-08!18;UBERON:0000025!7.18e-08!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,9.40e-11,23;UBERON:0001009,9.40e-11,23;UBERON:0004111,1.58e-09,122;UBERON:0007100,1.20e-08,18;UBERON:0000948,1.20e-08,18;UBERON:0005498,1.20e-08,18;UBERON:0004140,1.20e-08,18;UBERON:0009881,1.20e-08,18;UBERON:0004141,1.20e-08,18;UBERON:0003084,1.20e-08,18;UBERON:0007005,1.20e-08,18;UBERON:0004139,1.20e-08,18;UBERON:0004291,1.20e-08,18;UBERON:0010314,1.44e-08,92;UBERON:0000025,1.02e-07,114 | |||
|phase1_expression=3.84357233051505,0.697950815278722,0.909998478779072,0.30246421130683,1.50268718983904,1.51091344720701,1.63528848416868,0.258246646883153,0,0,0,0.0797721589953364,0,0.174840804837995,0,0.202475267389826,0,0.473193248037357,0,0,1.44573593256819,0.397163804803541,0.261199789138935,2.3998863419011,1.60586496747019,0.57423196411502,0.86152399231815,1.07735616342945,1.52018735565099,1.51218077855958,1.77384408524244,0.635030673459631,0,0,3.46621943701529,3.32469290716985,2.04169356262369,1.25559489221072,2.3440060335714,2.09409497589519,0.588231488031014,0.683045484958446,0,4.15459499319405,3.95370031756107,2.9367480345869,3.9119567217402,3.92445281484804,5.93152693383074,2.52758868796568,3.3596741190087,4.31257693094915,0.335565212115473,0,0,4.63066984864705,2.86533439938757,3.6097046459421,1.01158230429799,0.528990979272033,0,3.38844532069132,1.77858959222228,3.5995988691256,8.89979726310277,4.9733608046227,3.89480143673926,5.37905627450176,1.76272340924412,2.02508907497536,2.3135745748652,1.71390590642282,3.75476519617743,2.08234358665422,1.62937300731002,3.67687514644008,3.30347642998166,2.68143409978894,2.4577045320999,1.31886287730194,1.64677758484337,0.52091337055676,2.51264699101243,2.8138130501584,2.29197371665215,2.35702868378934,1.70846016958924,1.86399445825301,0.37863096666592,2.19157524309678,3.76823835312181,3.44169550792555,1.3599426674155,1.61910957491345,1.29955283489534,3.58421509677868,4.21333260395256,3.40860645156115,2.85764605063156,2.47337702157238,2.95771181531029,3.84979432242953,2.54805239706646,0,1.5154372870785,0.760079596425296,0,1.82694207550496,1.29468941823586,4.30482203287992,2.25530924795977,3.95805121805784,3.45923245884088,2.86373017049983,3.29248379979973,5.02666365318702,3.46072954828123,4.48258006451726,1.76922110389975,1.94120219936891,1.76673214768315,0,1.86391761218122,2.92780797011547,2.51336048176146,1.53274233125155,3.23500836165985,4.19931911695385,4.57452817463033,4.34392854273986,2.74500361691176,3.26701315493447,1.73824320192276,2.04572365864264,2.70124457927428,1.94689515681309,2.74966282395854,1.8661045591514,2.52722758433675,0.841767423545896,3.513251959993,2.29902104433473,2.16074555766419,2.26057226753573,2.4493139694478,2.94661556655154,2.24884138943349,1.29351685369508,1.07783996466421,2.08016688184601,1.58356011747554,1.09597866213787,3.05851974148158,2.78601733217733,4.52720700097476,1.79130840136644,2.1066395619397,1.80143534980301,5.96743348730745,2.89976081549703,3.75241695969754,2.16074473753218,4.26140524053378,4.32881309844288,3.85667782218446,3.72054311600653,6.43856163359086,4.2035523252181,2.79751744852917,3.94001913789829,4.05344047729279,5.11699955988663,7.46470391989572,6.1734952629771,1.26173969138476,3.08713837137853,0,0.528901133327089,2.98603550749328,2.32236671860439,3.22168653305233,2.01683524623343,2.2237804384487,1.33157938278791,2.84717436926707,1.81168850196412,1.50801125280162,1.98956472041151,2.33956904542944,0.898819408654221,2.16138049874694,1.99141273254367,1.32767530667157,2.05647322697512,0,2.64746726198909,2.32742984601151,2.17421041659988,1.83385957660346,2.80459281161244,2.35498091762062,2.59134044235781,2.37162101669719,0.500535317148282,1.37591296579242,0.449724224769707,0.608580364165509,0.964708639009667,0.763877555344259,0.575392274901621,1.29708181420028,2.47105271869273,1.43768206527355,2.23284568601102,3.12037673114561,3.28352541331245,2.69096120282868,1.92977408545347,2.58654466233247,1.89491411770485,2.44447464663039,2.03694102930226,3.52035372432753,3.01511263395268,5.2369600994923,0.390267295715598,1.41871629695572,4.4292937929755,3.50800491046472,3.27726629431476,2.76295970985433,3.90552458170081,0,3.26343410291226,2.45882136509518,0.827810238914197,3.21101179975584,1.87538698547525,4.75411341592359,6.81671503451807,0.631016438832513,0.780877488593277,2.58508077279359,2.15071918157297,2.22798674082394,1.41538265394416,2.83367491172426,1.75353514746787,1.97643888973262,0.963963949265421,2.41298144854057,4.80777129901589,2.44330439030364,3.95928295134085,1.32745138339963,2.18502572539483,1.209294227859,2.45186603682668,2.36241514304618,3.07435147943927,1.29214146584111,0.727067458955011,1.42598951353889,1.58018378967908,0,3.09406629744561,1.02131881726136,2.70091641046965,3.88076051348264,4.07240366560025,2.12808280370728,3.56737635204141,5.10101963866575,6.69822888052118,0.23467170806371,0.42366414172764,3.52845436887939,2.14352128823924,1.13025098687134,1.74907482291652,1.3130957840345,1.80554989719567,2.33184669303881,3.8939313422207,0.512612642393558,2.06386867963222,1.29636169158798,0.188368457004691,0.683471138605126,0.686334519619568,3.73952545986482,4.61839792668071,2.62579950228405,3.81868247206045,2.37251995185852,1.62655573701479,3.99619761040665,2.92723614420256,3.71216358368502,2.69728692769641,2.39695021603474,1.04702376793612,2.20345454596048,4.34937519160848,0,1.19613236835183,0.66183396182839,1.94451188344048,3.61647505737647,3.71703476079712,3.0512882047896,2.0832701575032,1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| |||
|short_description=p3@Gstm1 | |||
}} |
Revision as of 01:13, 14 September 2013
Short description: | p3@Gstm1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gstm1_5end |
Coexpression cluster: | NA |
Association with transcript: | -71bp_to_ENSMUST00000126593_5end |
EntrezGene: | Gstm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 9.40e-11 | 23 |
circulatory system | 9.40e-11 | 23 |
anatomical conduit | 1.58e-09 | 122 |
primary circulatory organ | 1.20e-08 | 18 |
heart | 1.20e-08 | 18 |
primitive heart tube | 1.20e-08 | 18 |
primary heart field | 1.20e-08 | 18 |
anterior lateral plate mesoderm | 1.20e-08 | 18 |
heart tube | 1.20e-08 | 18 |
heart primordium | 1.20e-08 | 18 |
cardiac mesoderm | 1.20e-08 | 18 |
cardiogenic plate | 1.20e-08 | 18 |
heart rudiment | 1.20e-08 | 18 |
structure with developmental contribution from neural crest | 1.44e-08 | 92 |
tube | 1.02e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.