FFCP PHASE1:Mm9::chr3:116671708..116671733,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=114301|HGNC=|MCL_coexpression_id=1452|UniProt=Q3UVT7|association_with_transcript=42bp_to_ENSMUST00000119557_5end|description=CAGE_peak_2_at_Palmd_5end|id=chr3:116671708..116671733,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!5.13e-14!122;UBERON:0000025!6.15e-12!114;UBERON:0000468!2.52e-10!333;UBERON:0000479!1.93e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.10e-13,122;UBERON:0000025,1.31e-11,114|phase1_expression=5.92550734287738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73893940374735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,1.09843091367236,1.55543919259427,0.139986421625363,0,0,0,0,0.257259436035947,1.71920063963254,3.09403255366465,4.04632921719196,3.70293685490423,1.90149421051854,0,0,0,0.988866362566974,0,0,0,5.39185984004084,4.99521971827255,5.67877395648731,2.57085885963423,2.87129103237098,2.69479758272899,1.82106394934649,2.75765635983006,8.8092704799511,6.76742891851495,4.14737639791857,2.90149833006426,2.19570344645783,4.16730696445408,3.35019598801657,3.93933827022176,4.5839474333043,3.83017161115768,5.83723891276322,2.23679334990361,0.37863096666592,0.68014404096107,40.8708929069366,5.16254326188832,20.3991400112325,10.7940638327563,5.19821133958135,20.6092368064774,14.3253308534387,0.170430322578058,0,0.35333957451034,4.78867627240714,0,0,0,3.030874574157,2.53359865475099,2.02209778005913,8.79215873836762,5.17875767294343,7.27366481417641,2.25530924795977,4.26251669636998,1.61430848079241,3.01445281105245,6.23220147819235,6.78599593180248,0.494389935468748,99.1951588470594,1.76922110389975,8.8971767471075,3.3126227769059,6.30337829075789,1.86391761218122,7.02673912827713,4.39838084308256,1.53274233125155,0,0,0,10.3355541189328,9.60751265919116,4.52355667606312,10.2556348913443,9.2057564638919,8.51930982694196,8.4365456795234,4.3790926455636,6.46916247172484,6.31806896084187,43.1405804567272,2.86264974517948,2.75882525320168,4.14142898552303,5.42537344208574,5.30684693380357,6.14945857367279,4.77878795254617,26.6464471861186,0.862271971731369,5.48407632486676,4.57472922826267,5.47989331068937,9.45360647367033,13.5818344943645,13.9931852757402,2.18937693500343,0,0,0,3.52113813310353,7.03578179943289,9.18316513451176,12.3107262504309,9.64144735562279,11.415766353666,13.2544348507732,10.1943892531855,16.1136172466694,16.9496645410885,35.1318373129264,38.5887533438273,41.813196403645,41.9340720205907,34.6252560401759,15.5614561937454,9.36431972651488,0,2.11560453330835,1.06644125267617,0.696710015581316,1.15980715189884,1.81515172161008,2.00140239460383,2.66315876557583,0.949058123089023,2.14108641141214,3.77002813200404,2.98434708061726,3.11942539390592,4.49409704327111,1.94524244887225,2.38969527905241,1.13800740571849,1.14248512609729,0,1.01825663922657,1.16371492300575,1.47285221769669,2.52946148497029,2.06654207171443,2.98297582898612,1.72756029490521,18.0836102523161,0.83422552858047,0.589676985339609,0.224862112384854,1.21716072833102,0.72353147925725,2.29163266603278,3.45235364940973,13.619359049103,14.0026320725922,20.1275489138296,21.2120340171047,20.9065240986756,16.1650481886152,8.7904732625737,7.23665282045051,41.7542209776527,1.32643988239339,3.25929952884052,4.92260748748046,5.16318546234705,9.21284415929987,13.3304438896168,13.0739544064725,25.3792582010968,24.8040452406628,25.0343986792255,47.520361267564,35.9184762281063,26.4707777204166,0,0,6.88469982226651,16.5562047782839,8.99083303931635,5.50894926983355,0,16.4106102682842,0,0.390438744296638,0.430846795465598,0.477937595905104,0.445597348164788,0.283076530788832,0,0.876767573733936,1.18586333383957,8.67567554338879,8.80028528291265,2.67098405500883,4.23506094319298,8.90838664051691,5.30980553359851,1.94224508923985,1.209294227859,4.14931175462976,8.26845300066164,11.9899707698132,11.3708448994017,13.4507479906677,11.4079161083111,9.7971394960103,4.21674434299995,5.15677716240934,7.48967132658334,3.24109969256358,3.49268446213437,3.85806663056866,6.38424841112185,6.42127743367454,7.89835298890181,7.61162372786498,1.64270195644597,4.02480934641258,10.1443063105282,30.6688430471153,19.0528023501169,13.932285658404,12.1759790883199,15.2651036762907,2.33184669303881,8.90041449650446,0.341741761595705,4.95328483111734,3.1483069652851,0.565105371014073,0.410082683163076,0.686334519619568,0,0,0,3.81868247206045,0.316335993581135,3.65975040828328,3.67218158794124,4.80903080833278,4.14888871117737,6.60835297285622,7.27350410382956,7.85267825952089,2.20345454596048,45.9791091684325,0,1.94371509857172,1.32366792365678,1.36115831840833,3.22899558694328,4.05494701177868,2.8165737274981,2.3436789271911,1.8874681996628,0.483168241652012,1.72818003754719,1.58005560314089,0.810900861160657,1.84879722896689,1.81889152168913,1.25318686967237,2.18549490259391,0.480781798079875,0.147689527174577,1.61546319917036,1.21930890648,1.20991422164209,1.07203668813728,0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| ||
|EntrezGene=114301 | |||
|HGNC= | |||
|MCL_coexpression_id=1452 | |||
|UniProt=Q3UVT7 | |||
|association_with_transcript=42bp_to_ENSMUST00000119557_5end | |||
|description=CAGE_peak_2_at_Palmd_5end | |||
|id=chr3:116671708..116671733,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!5.13e-14!122;UBERON:0000025!6.15e-12!114;UBERON:0000468!2.52e-10!333;UBERON:0000479!1.93e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.10e-13,122;UBERON:0000025,1.31e-11,114 | |||
|phase1_expression=5.92550734287738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73893940374735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,1.09843091367236,1.55543919259427,0.139986421625363,0,0,0,0,0.257259436035947,1.71920063963254,3.09403255366465,4.04632921719196,3.70293685490423,1.90149421051854,0,0,0,0.988866362566974,0,0,0,5.39185984004084,4.99521971827255,5.67877395648731,2.57085885963423,2.87129103237098,2.69479758272899,1.82106394934649,2.75765635983006,8.8092704799511,6.76742891851495,4.14737639791857,2.90149833006426,2.19570344645783,4.16730696445408,3.35019598801657,3.93933827022176,4.5839474333043,3.83017161115768,5.83723891276322,2.23679334990361,0.37863096666592,0.68014404096107,40.8708929069366,5.16254326188832,20.3991400112325,10.7940638327563,5.19821133958135,20.6092368064774,14.3253308534387,0.170430322578058,0,0.35333957451034,4.78867627240714,0,0,0,3.030874574157,2.53359865475099,2.02209778005913,8.79215873836762,5.17875767294343,7.27366481417641,2.25530924795977,4.26251669636998,1.61430848079241,3.01445281105245,6.23220147819235,6.78599593180248,0.494389935468748,99.1951588470594,1.76922110389975,8.8971767471075,3.3126227769059,6.30337829075789,1.86391761218122,7.02673912827713,4.39838084308256,1.53274233125155,0,0,0,10.3355541189328,9.60751265919116,4.52355667606312,10.2556348913443,9.2057564638919,8.51930982694196,8.4365456795234,4.3790926455636,6.46916247172484,6.31806896084187,43.1405804567272,2.86264974517948,2.75882525320168,4.14142898552303,5.42537344208574,5.30684693380357,6.14945857367279,4.77878795254617,26.6464471861186,0.862271971731369,5.48407632486676,4.57472922826267,5.47989331068937,9.45360647367033,13.5818344943645,13.9931852757402,2.18937693500343,0,0,0,3.52113813310353,7.03578179943289,9.18316513451176,12.3107262504309,9.64144735562279,11.415766353666,13.2544348507732,10.1943892531855,16.1136172466694,16.9496645410885,35.1318373129264,38.5887533438273,41.813196403645,41.9340720205907,34.6252560401759,15.5614561937454,9.36431972651488,0,2.11560453330835,1.06644125267617,0.696710015581316,1.15980715189884,1.81515172161008,2.00140239460383,2.66315876557583,0.949058123089023,2.14108641141214,3.77002813200404,2.98434708061726,3.11942539390592,4.49409704327111,1.94524244887225,2.38969527905241,1.13800740571849,1.14248512609729,0,1.01825663922657,1.16371492300575,1.47285221769669,2.52946148497029,2.06654207171443,2.98297582898612,1.72756029490521,18.0836102523161,0.83422552858047,0.589676985339609,0.224862112384854,1.21716072833102,0.72353147925725,2.29163266603278,3.45235364940973,13.619359049103,14.0026320725922,20.1275489138296,21.2120340171047,20.9065240986756,16.1650481886152,8.7904732625737,7.23665282045051,41.7542209776527,1.32643988239339,3.25929952884052,4.92260748748046,5.16318546234705,9.21284415929987,13.3304438896168,13.0739544064725,25.3792582010968,24.8040452406628,25.0343986792255,47.520361267564,35.9184762281063,26.4707777204166,0,0,6.88469982226651,16.5562047782839,8.99083303931635,5.50894926983355,0,16.4106102682842,0,0.390438744296638,0.430846795465598,0.477937595905104,0.445597348164788,0.283076530788832,0,0.876767573733936,1.18586333383957,8.67567554338879,8.80028528291265,2.67098405500883,4.23506094319298,8.90838664051691,5.30980553359851,1.94224508923985,1.209294227859,4.14931175462976,8.26845300066164,11.9899707698132,11.3708448994017,13.4507479906677,11.4079161083111,9.7971394960103,4.21674434299995,5.15677716240934,7.48967132658334,3.24109969256358,3.49268446213437,3.85806663056866,6.38424841112185,6.42127743367454,7.89835298890181,7.61162372786498,1.64270195644597,4.02480934641258,10.1443063105282,30.6688430471153,19.0528023501169,13.932285658404,12.1759790883199,15.2651036762907,2.33184669303881,8.90041449650446,0.341741761595705,4.95328483111734,3.1483069652851,0.565105371014073,0.410082683163076,0.686334519619568,0,0,0,3.81868247206045,0.316335993581135,3.65975040828328,3.67218158794124,4.80903080833278,4.14888871117737,6.60835297285622,7.27350410382956,7.85267825952089,2.20345454596048,45.9791091684325,0,1.94371509857172,1.32366792365678,1.36115831840833,3.22899558694328,4.05494701177868,2.8165737274981,2.3436789271911,1.8874681996628,0.483168241652012,1.72818003754719,1.58005560314089,0.810900861160657,1.84879722896689,1.81889152168913,1.25318686967237,2.18549490259391,0.480781798079875,0.147689527174577,1.61546319917036,1.21930890648,1.20991422164209,1.07203668813728,0.481059208201647,0.467507608726276,24.9403421976732,0,0,0,7.34120457322324,5.06742683718191,6.77661009788881,19.9362592543531,3.00943262421218,8.471277639256,11.9684561491866,6.30185064783336,9.45192502890282,4.7955776383945,4.5323633843382,4.72515750162264,4.05289082901798,5.89085131679466,2.07104124700728,1.764384908931,5.1873233542134,4.09760653809922,5.83456120963906,5.65955539095552,6.25067928730048,11.1123363900808,9.68364769022803,13.4786068028562,10.8659801058433,11.660047794951,13.7697229211836,10.1132828067473,10.8202507564229,10.3383844120104,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| |||
|short_description=p2@Palmd | |||
}} | |||
Revision as of 01:20, 14 September 2013
| Short description: | p2@Palmd |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Palmd_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1452 |
| Association with transcript: | 42bp_to_ENSMUST00000119557_5end |
| EntrezGene: | Palmd |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| anatomical conduit | 1.10e-13 | 122 |
| tube | 1.31e-11 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
