FFCP PHASE1:Mm9::chr3:135354903..135354945,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18033|HGNC=|UniProt=P25799|association_with_transcript=-392bp_to_ENSMUST00000138602,NM_008689,uc008rlx.1,uc008rly.1_5end|description=CAGE_peak_7_at_Nfkb1_5end|id=chr3:135354903..135354945,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!2.95e-08!27;UBERON:0003103!1.72e-07!43;UBERON:0005153!5.33e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0003103,1.33e-07,43;UBERON:0005153,1.86e-07,17;UBERON:0005157,3.46e-07,20|phase1_expression=2.40223270657191,1.04692622291808,0.909998478779072,0.30246421130683,1.00179145989269,1.34303417529512,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0.137114433605739,0,1.19060606211498,0.198581902401771,0,0.799962113967033,1.14704640533585,2.8711598205751,0.86152399231815,0.861884930743556,0.570070258369122,0.504060259519861,0.665191531965914,0,0,0,0,0.831173226792462,1.22501613757421,0.418531630736908,0,0,0.588231488031014,0,0,4.15459499319405,3.95370031756107,2.0190142737785,5.47673941043627,0.65407546914134,3.07560655828261,2.13872888981712,1.25987779462826,5.75010257459886,0.167782606057736,0,0,5.91696702882678,8.5960031981627,4.12537673821954,0,1.05798195854407,0,2.37191172448392,2.66788438833342,0.449949858640699,0.988866362566974,1.4209602298922,0.898800331555214,3.45796474789399,0.103689612308478,0.405017814995072,0,0.856952953211411,1.54607978666129,0.122490799214954,0.191690942036473,0,0,1.40456071893706,1.99688493233117,0.131886287730194,0.640413505216868,0,0.558365998002762,0,1.37518422999129,2.06240009831567,1.56608848879013,1.1183966749518,0.454357159999104,1.13357340160178,1.15945795480671,0,2.719885334831,0,0,0.448026887097336,0.702222100658759,4.4311883870295,3.89679006904303,3.18005617059306,1.40843419776681,7.69958864485907,0,0,0.865964164044856,0,0,0.68510327831436,0,1.33597925158342,1.21439728736295,3.04465478312141,4.15107895060905,2.56228488939458,3.17489509266403,2.51333182659351,0.741584903203122,1.59059292611903,0,2.42650274921114,1.10420759230197,1.45462575940567,5.59175283654366,2.04946557908083,1.8850203613211,2.29911349687732,0.718890747035522,0.599902730993408,0.127070227073065,1.3481157546434,0.457500602818626,0.125654352112864,0.173824320192276,1.02286182932132,1.45451631191692,0.811206315338788,3.66621709861139,2.48813941220186,1.26361379216837,1.47309299120532,0.520481771850815,2.06911893990126,1.26043490863744,2.41127708537144,4.42237244483631,3.45907044769094,3.93547243150861,3.3631438196072,0.431135985865684,0.378212160335639,1.40760899331159,0.43839146485515,0.556094498451196,1.74126083261083,1.02891068203972,0.796137067273973,0,0,0,1.03562886267751,2.11073453982987,1.2604344302271,1.89395788468168,2.36117078096885,1.69693824176116,1.86027155800326,2.41446061259657,3.38619492864792,0.658239399653922,4.43252153013557,4.13450928683864,2.19299981137998,2.19550115291051,3.48936688776967,0.420579897128254,0.514523061896422,1.32167513193519,0.793351699990633,0.853153002140936,1.62565670302307,2.31961430379768,1.21010114774006,1.33426826306922,1.90225626112559,1.89811624617805,0.988193728344065,3.2673577144035,1.39269530428806,1.36474860983384,0.898819408654221,0.648414149624083,1.39398891278057,3.03468641524931,2.51346727741403,4.50830942692322,4.2766778847516,3.68509725618489,4.48869247298039,2.97211724484009,0.885660887877613,1.41298855057237,1.85095745882701,0.592905254174298,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0.863088412352432,1.13494658742525,0.823684239564244,4.31304619582064,2.60498663367952,1.24815069245824,1.01031551178845,1.61457672169721,0,1.66277871149944,1.32643988239339,1.79261474086228,1.69745085775188,2.34690248288502,3.51763140627813,3.09456733151818,5.07347484430277,5.83250033192907,6.42247599981447,5.26200736569707,2.94953966488328,3.28101465545202,4.48412081602686,1.50791283939272,0,1.96705709207614,1.93155722413313,1.12385412991454,1.28932855251423,1.47541450839008,4.29200576247434,2.2085575359138,0.390438744296638,2.58508077279359,1.43381278771531,0.445597348164788,1.13230612315533,0.809621403349789,2.33804686329049,2.76701444562566,1.28528526568723,3.12268187458191,1.06839362200353,3.09485222771795,4.28922319728592,1.32745138339963,0.728341908464944,0.906970670894253,0.754420319023592,0,1.53717573971964,0.775284879504663,0.363533729477506,1.06949213515416,2.52829406348653,3.16255825724996,1.03135543248187,2.04263763452273,0.720244376125241,0.905510786479282,0,0.886701168211368,1.60531935841864,1.48094118541909,1.2178597964584,1.40803024838226,0.847328283455281,4.19003956304428,1.97863503529776,1.61464426695906,1.38719727334758,1.19372344003136,0.656563598980245,0.874442509889552,1.66882771809459,0.170870880797853,1.03193433981611,1.48155621895769,0.188368457004691,0.546776910884101,0.686334519619568,0.509935289981566,0.279902904647316,0.552799895217695,0.954670618015114,1.73984796469624,2.43983360552218,1.94409613479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| ||
|EntrezGene=18033 | |||
|HGNC= | |||
|UniProt=P25799 | |||
|association_with_transcript=-392bp_to_ENSMUST00000138602,NM_008689,uc008rlx.1,uc008rly.1_5end | |||
|description=CAGE_peak_7_at_Nfkb1_5end | |||
|id=chr3:135354903..135354945,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!2.95e-08!27;UBERON:0003103!1.72e-07!43;UBERON:0005153!5.33e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,1.33e-07,43;UBERON:0005153,1.86e-07,17;UBERON:0005157,3.46e-07,20 | |||
|phase1_expression=2.40223270657191,1.04692622291808,0.909998478779072,0.30246421130683,1.00179145989269,1.34303417529512,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0.137114433605739,0,1.19060606211498,0.198581902401771,0,0.799962113967033,1.14704640533585,2.8711598205751,0.86152399231815,0.861884930743556,0.570070258369122,0.504060259519861,0.665191531965914,0,0,0,0,0.831173226792462,1.22501613757421,0.418531630736908,0,0,0.588231488031014,0,0,4.15459499319405,3.95370031756107,2.0190142737785,5.47673941043627,0.65407546914134,3.07560655828261,2.13872888981712,1.25987779462826,5.75010257459886,0.167782606057736,0,0,5.91696702882678,8.5960031981627,4.12537673821954,0,1.05798195854407,0,2.37191172448392,2.66788438833342,0.449949858640699,0.988866362566974,1.4209602298922,0.898800331555214,3.45796474789399,0.103689612308478,0.405017814995072,0,0.856952953211411,1.54607978666129,0.122490799214954,0.191690942036473,0,0,1.40456071893706,1.99688493233117,0.131886287730194,0.640413505216868,0,0.558365998002762,0,1.37518422999129,2.06240009831567,1.56608848879013,1.1183966749518,0.454357159999104,1.13357340160178,1.15945795480671,0,2.719885334831,0,0,0.448026887097336,0.702222100658759,4.4311883870295,3.89679006904303,3.18005617059306,1.40843419776681,7.69958864485907,0,0,0.865964164044856,0,0,0.68510327831436,0,1.33597925158342,1.21439728736295,3.04465478312141,4.15107895060905,2.56228488939458,3.17489509266403,2.51333182659351,0.741584903203122,1.59059292611903,0,2.42650274921114,1.10420759230197,1.45462575940567,5.59175283654366,2.04946557908083,1.8850203613211,2.29911349687732,0.718890747035522,0.599902730993408,0.127070227073065,1.3481157546434,0.457500602818626,0.125654352112864,0.173824320192276,1.02286182932132,1.45451631191692,0.811206315338788,3.66621709861139,2.48813941220186,1.26361379216837,1.47309299120532,0.520481771850815,2.06911893990126,1.26043490863744,2.41127708537144,4.42237244483631,3.45907044769094,3.93547243150861,3.3631438196072,0.431135985865684,0.378212160335639,1.40760899331159,0.43839146485515,0.556094498451196,1.74126083261083,1.02891068203972,0.796137067273973,0,0,0,1.03562886267751,2.11073453982987,1.2604344302271,1.89395788468168,2.36117078096885,1.69693824176116,1.86027155800326,2.41446061259657,3.38619492864792,0.658239399653922,4.43252153013557,4.13450928683864,2.19299981137998,2.19550115291051,3.48936688776967,0.420579897128254,0.514523061896422,1.32167513193519,0.793351699990633,0.853153002140936,1.62565670302307,2.31961430379768,1.21010114774006,1.33426826306922,1.90225626112559,1.89811624617805,0.988193728344065,3.2673577144035,1.39269530428806,1.36474860983384,0.898819408654221,0.648414149624083,1.39398891278057,3.03468641524931,2.51346727741403,4.50830942692322,4.2766778847516,3.68509725618489,4.48869247298039,2.97211724484009,0.885660887877613,1.41298855057237,1.85095745882701,0.592905254174298,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0.863088412352432,1.13494658742525,0.823684239564244,4.31304619582064,2.60498663367952,1.24815069245824,1.01031551178845,1.61457672169721,0,1.66277871149944,1.32643988239339,1.79261474086228,1.69745085775188,2.34690248288502,3.51763140627813,3.09456733151818,5.07347484430277,5.83250033192907,6.42247599981447,5.26200736569707,2.94953966488328,3.28101465545202,4.48412081602686,1.50791283939272,0,1.96705709207614,1.93155722413313,1.12385412991454,1.28932855251423,1.47541450839008,4.29200576247434,2.2085575359138,0.390438744296638,2.58508077279359,1.43381278771531,0.445597348164788,1.13230612315533,0.809621403349789,2.33804686329049,2.76701444562566,1.28528526568723,3.12268187458191,1.06839362200353,3.09485222771795,4.28922319728592,1.32745138339963,0.728341908464944,0.906970670894253,0.754420319023592,0,1.53717573971964,0.775284879504663,0.363533729477506,1.06949213515416,2.52829406348653,3.16255825724996,1.03135543248187,2.04263763452273,0.720244376125241,0.905510786479282,0,0.886701168211368,1.60531935841864,1.48094118541909,1.2178597964584,1.40803024838226,0.847328283455281,4.19003956304428,1.97863503529776,1.61464426695906,1.38719727334758,1.19372344003136,0.656563598980245,0.874442509889552,1.66882771809459,0.170870880797853,1.03193433981611,1.48155621895769,0.188368457004691,0.546776910884101,0.686334519619568,0.509935289981566,0.279902904647316,0.552799895217695,0.954670618015114,1.73984796469624,2.43983360552218,1.94409613479242,2.09088296014469,2.62035076495413,1.75323650300267,3.05817786183743,2.09404753587224,3.75883422546199,1.86401793926078,0.56369293868419,1.94371509857172,0.992750942742586,1.55560950675238,1.54991788173277,0.675824501963113,2.8165737274981,3.3853140059427,3.14578033277133,0.966336483304024,0.864090018773596,0.632022241256357,2.63542779877213,2.2596410576262,1.55904987573354,1.43221356533985,1.39076948346885,0.961563596159751,0.295379054349154,0.403865799792591,0.685861259894999,0.302478555410522,0.584747284438515,0.384847366561318,0.584384510907845,1.81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| |||
|short_description=p7@Nfkb1 | |||
}} | |||
Revision as of 01:37, 14 September 2013
| Short description: | p7@Nfkb1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_7_at_Nfkb1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -392bp_to_ENSMUST00000138602, NM_008689, uc008rlx.1, uc008rly.1_5end |
| EntrezGene: | Nfkb1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| compound organ | 1.33e-07 | 43 |
| epithelial bud | 1.86e-07 | 17 |
| epithelial fold | 3.46e-07 | 20 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
