FFCP PHASE1:Mm9::chr3:142283686..142283697,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14469|HGNC=|MCL_coexpression_id=86|UniProt=Q9Z0E6|association_with_transcript=59bp_to_NM_010260,uc008roy.1_5end|description=CAGE_peak_5_at_Gbp2_5end|id=chr3:142283686..142283697,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000557,7.75e-08,7;CL:0000988,3.55e-07,32;CL:0002032,3.55e-07,32;CL:0000037,3.55e-07,32;CL:0000837,3.55e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.20e-08!70;UBERON:0000077!2.22e-07!97;UBERON:0000926!2.31e-07!193;UBERON:0004120!2.31e-07!193;UBERON:0006603!2.31e-07!193;UBERON:0005057!3.74e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000055,9.89e-08,5;UBERON:0007500,9.89e-08,5;UBERON:0001981,9.89e-08,5;UBERON:0002049,9.89e-08,5;UBERON:0007798,9.89e-08,5;UBERON:0004537,9.89e-08,5;UBERON:0006965,9.89e-08,5|phase1_expression=0,0.348975407639361,0,0,0,0,0.233612640595526,3.22808308603941,1.40788722151667,4.91535505276186,0.34243593645101,1.03703806693937,0.513602189793617,0.611942816932982,0,0.202475267389826,0,0.946386496074713,0.274228867211478,0.42438965179803,1.10556277196391,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0.523523743973798,1.17646297606203,0,0,5.41356317294982,4.46058497365864,0.734187008646726,0,0,0.219686182734472,0,0,0,0.335565212115473,0,0,0.771778308107841,1.14613375975503,0.515672092277442,0,0,0,0,0,0,0,0,0,1.15265491596466,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0.151452386666368,0.0755715601067855,1.44932244350839,1.72084775396277,0,0,0,0,0.842666520790511,0.511290967734173,0,0,0,1.28326477414318,0,0,0,0,0,1.1418387971906,6.47344709117929,1.63286352971307,0,0.304465478312141,0.461230994512117,0,0,0.502666365318702,0.494389935468748,3.61498392299779,0.884610551949874,0,0,0,0,0,0,1.02182822083437,1.31796636956512,1.19980546198682,2.28726408731516,0,0,0,0,0.511430914660661,0.41557608911912,0.162241263067758,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,1.40442637462647,2.05878325691772,0.852490498186778,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0.658650345873152,0.536825675041487,0,0.102904612379284,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0.397912944082302,1.16978452271472,0,1.29682829924817,0.995706366271836,0,0,0,0,0.193952487167626,0,0,0.147610147979602,0.156998727841375,0,1.48226313543574,0,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0.763877555344259,0,0.324270453550071,0.549122826376163,4.31304619582064,4.09355042435354,0,0.757736633841335,0.717589654087649,0.964887042726734,1.66277871149944,0,0,0.169745085775188,0.234690248288502,0,0.476087281772027,0,0.315270288212382,0.8858587585951,0.159454768657487,1.3109065177259,2.41758974612254,1.3018415272336,18.0949540727127,100.078645822643,0.491764273019036,1.10374698521893,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0.162886959353576,1.31976098378028,2.65490276679926,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.632073515871632,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,1.64270195644597,0.21183207086382,0,0.65954501176592,0.161464426695906,0,0,0,1.7488850197791,0,0.854354403989263,0.82554747185289,0.185194527369712,0.376736914009382,0.410082683163076,0.686334519619568,1.5298058699447,0.979660166265606,1.10559979043539,0,0,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.495920734352016,0.523511883968059,0.90730481304255,0,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0,0,0,0.205421914329655,1.29920822977795,0,0,0.360586348559907,0.443068581523732,0.504832249740738,0.304827226619999,0.504130925684203,0.292373642219257,0.288635524920988,0.233753804363138,0.226730383615211,0.443971906748129,0,0.167884616364078,0.965947970160952,1.50145980360946,2.01466786693992,0.428736758158132,0.501572104035363,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p5@Gbp2}} | ||
|EntrezGene=14469 | |||
|HGNC= | |||
|MCL_coexpression_id=86 | |||
|UniProt=Q9Z0E6 | |||
|association_with_transcript=59bp_to_NM_010260,uc008roy.1_5end | |||
|description=CAGE_peak_5_at_Gbp2_5end | |||
|id=chr3:142283686..142283697,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,7.75e-08,7;CL:0000988,3.55e-07,32;CL:0002032,3.55e-07,32;CL:0000037,3.55e-07,32;CL:0000837,3.55e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.20e-08!70;UBERON:0000077!2.22e-07!97;UBERON:0000926!2.31e-07!193;UBERON:0004120!2.31e-07!193;UBERON:0006603!2.31e-07!193;UBERON:0005057!3.74e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,9.89e-08,5;UBERON:0007500,9.89e-08,5;UBERON:0001981,9.89e-08,5;UBERON:0002049,9.89e-08,5;UBERON:0007798,9.89e-08,5;UBERON:0004537,9.89e-08,5;UBERON:0006965,9.89e-08,5 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0.233612640595526,3.22808308603941,1.40788722151667,4.91535505276186,0.34243593645101,1.03703806693937,0.513602189793617,0.611942816932982,0,0.202475267389826,0,0.946386496074713,0.274228867211478,0.42438965179803,1.10556277196391,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0.523523743973798,1.17646297606203,0,0,5.41356317294982,4.46058497365864,0.734187008646726,0,0,0.219686182734472,0,0,0,0.335565212115473,0,0,0.771778308107841,1.14613375975503,0.515672092277442,0,0,0,0,0,0,0,0,0,1.15265491596466,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0.151452386666368,0.0755715601067855,1.44932244350839,1.72084775396277,0,0,0,0,0.842666520790511,0.511290967734173,0,0,0,1.28326477414318,0,0,0,0,0,1.1418387971906,6.47344709117929,1.63286352971307,0,0.304465478312141,0.461230994512117,0,0,0.502666365318702,0.494389935468748,3.61498392299779,0.884610551949874,0,0,0,0,0,0,1.02182822083437,1.31796636956512,1.19980546198682,2.28726408731516,0,0,0,0,0.511430914660661,0.41557608911912,0.162241263067758,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,1.40442637462647,2.05878325691772,0.852490498186778,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0.658650345873152,0.536825675041487,0,0.102904612379284,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0.397912944082302,1.16978452271472,0,1.29682829924817,0.995706366271836,0,0,0,0,0.193952487167626,0,0,0.147610147979602,0.156998727841375,0,1.48226313543574,0,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0.763877555344259,0,0.324270453550071,0.549122826376163,4.31304619582064,4.09355042435354,0,0.757736633841335,0.717589654087649,0.964887042726734,1.66277871149944,0,0,0.169745085775188,0.234690248288502,0,0.476087281772027,0,0.315270288212382,0.8858587585951,0.159454768657487,1.3109065177259,2.41758974612254,1.3018415272336,18.0949540727127,100.078645822643,0.491764273019036,1.10374698521893,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0.162886959353576,1.31976098378028,2.65490276679926,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.632073515871632,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,1.64270195644597,0.21183207086382,0,0.65954501176592,0.161464426695906,0,0,0,1.7488850197791,0,0.854354403989263,0.82554747185289,0.185194527369712,0.376736914009382,0.410082683163076,0.686334519619568,1.5298058699447,0.979660166265606,1.10559979043539,0,0,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.495920734352016,0.523511883968059,0.90730481304255,0,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0,0,0,0.205421914329655,1.29920822977795,0,0,0.360586348559907,0.443068581523732,0.504832249740738,0.304827226619999,0.504130925684203,0.292373642219257,0.288635524920988,0.233753804363138,0.226730383615211,0.443971906748129,0,0.167884616364078,0.965947970160952,1.50145980360946,2.01466786693992,0.428736758158132,0.501572104035363,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Gbp2 | |||
}} |
Revision as of 01:43, 14 September 2013
Short description: | p5@Gbp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gbp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | 59bp_to_NM_010260, uc008roy.1_5end |
EntrezGene: | Gbp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 7.75e-08 | 7 |
hematopoietic cell | 3.55e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.55e-07 | 32 |
hematopoietic stem cell | 3.55e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.55e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
vessel | 9.89e-08 | 5 |
epithelial tube open at both ends | 9.89e-08 | 5 |
blood vessel | 9.89e-08 | 5 |
vasculature | 9.89e-08 | 5 |
vascular system | 9.89e-08 | 5 |
blood vasculature | 9.89e-08 | 5 |
vascular cord | 9.89e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.