FFCP PHASE1:Mm9::chr3:146162669..146162728,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100041703,100043318,100043507,100048410,14707|HGNC=|MCL_coexpression_id=380|UniProt=Q80SZ7|association_with_transcript=-69bp_to_ENSMUST00000090031_5end|description=CAGE_peak_3_at_Gm13342_5end,CAGE_peak_3_at_Gm15776_5end,CAGE_peak_3_at_Gm4356_5end,CAGE_peak_3_at_Gng5_5end,CAGE_peak_3_at_LOC100048410_5end|id=chr3:146162669..146162728,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!5.32e-11!59;UBERON:0004923!4.15e-10!24;UBERON:0000160!3.00e-09!43;UBERON:0000344!3.75e-08!15;UBERON:0001242!3.11e-07!13;UBERON:0000060!3.11e-07!13;UBERON:0001262!3.11e-07!13;UBERON:0004786!3.11e-07!13;UBERON:0004119!5.28e-07!130;UBERON:0000925!5.28e-07!130;UBERON:0006595!5.28e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0005409,9.25e-11,47;UBERON:0004923,2.69e-10,24;UBERON:0000160,1.97e-09,31;UBERON:0000344,2.69e-08,15;UBERON:0001242,2.33e-07,13;UBERON:0001262,2.33e-07,13;UBERON:0004786,2.33e-07,13|phase1_expression=1.92178616525753,7.67745896806594,10.4649825059593,7.86406949397758,4.50806156951712,4.19698179779725,1.63528848416868,1.16210991097419,0,0.234064526321993,0,0.0797721589953364,0.856003649656029,0.961624426608971,5.66286595086627,12.5534665781692,11.8925519281785,1.10411757875383,1.7824876368746,2.12194825899015,2.21112554392781,0.695036658406197,0.522399578277871,5.91971964335605,5.27641346454491,16.0784949952206,6.8921919385452,7.11055067863434,10.6413114895569,8.56902441183765,5.32153225572731,0,1.23012957516914,0,7.51014211353314,7.64679368649065,5.51257261908397,17.5783284909501,32.8160844699996,18.3233310390829,27.6468799374577,32.1031377930469,37.86980753643,0.881277725829041,1.11514624341466,1.28482726513177,4.69434806608824,1.30815093828268,1.75748946187577,2.3331587888914,1.81982348112971,2.87505128729943,2.18117387875057,0.725362142011344,1.34437519656986,1.54355661621568,1.43266719969378,1.54701627683233,1.82084814773638,0.528990979272033,2.53532561402472,4.74382344896785,0.889294796111139,9.89889689009539,10.8775299882367,9.2362414942993,2.99600110518405,4.2264013585371,1.14058573539325,0.945041568321835,1.26194976810829,2.28520787523043,0.662605622854841,0.734944795289724,1.53352753629178,1.83843757322004,1.10115880999389,0.383062014255563,0.307213066512487,1.58263545276233,1.37231465403614,1.56274011167028,2.79182999001381,0,1.5279824777681,1.47314292736834,0.854230084794618,0.372798891650601,3.48340489332647,2.34271836331035,2.89864488701678,2.58127163094416,1.3599426674155,1.07940638327563,1.29955283489534,1.79210754838934,1.68533304158102,1.87473354835864,2.07828803682295,2.12003744706204,1.97180787687353,1.28326477414318,2.54805239706646,0,2.59789249213457,1.01343946190039,2.02209778005913,2.51204535381932,1.03575153458869,1.33597925158342,2.77576522825817,1.82679286987285,0.691846491768175,1.05505848386836,1.29347577849275,0.628332956648377,2.96633961281249,0.722996784599558,1.76922110389975,0.970601099684455,3.5334642953663,1.45462575940567,9.31958806090611,0,0.209446706813455,6.38642638021478,2.75574786363617,3.59941638596045,2.54140454146129,0.748953197024114,0,0.251308704225729,0.869121600961382,1.02286182932132,1.45451631191692,0.648965052271031,0.81471491080253,2.48813941220186,5.55990068554084,0.841767423545896,1.04096354370163,1.83921683546778,0.900310649026746,1.20563854268572,0.884474488967262,0.768682321709099,1.03071897015702,1.29351685369508,0.646703978798527,1.13463648100692,0.879755620819744,1.31517439456545,1.39023624612799,5.57203466435466,3.08673204611915,1.39323986772945,4.91549231119264,1.80143534980301,2.84163499395593,1.44988040774851,1.17263029990548,2.16074473753218,1.18372367792605,1.57411385397923,2.31400669331067,1.39520366850245,1.3413670069981,1.98501082024188,0.987359099480883,2.29834449710733,1.86458261955468,1.16959989940266,0.658650345873152,0.939444931322602,0.210289948564127,0.411618449517138,6.60837565967596,5.02456076660734,0.426576501070468,0.696710015581316,0.902072229254653,2.42020229548011,4.22518283305254,6.08722003560189,4.2707615539006,2.9645811850322,6.28338022000674,5.17286827306992,4.874102177978,2.69645822596266,5.40345124686736,3.18626037206988,1.89667900953082,1.82797620175566,1.1270773567308,1.01825663922657,0.387904974335251,1.40271639780637,1.20149420536089,2.65698266363284,0.941992367048249,1.48076596706161,0.592905254174298,3.00321190288969,5.11053387294328,6.74586337154561,6.08580364165509,6.75296047306767,7.38414970166117,6.32931502391783,4.05338066937588,3.0201755450689,10.0637744569148,1.86070473834252,2.18426371180192,1.76805214562978,1.97337154874103,1.4473305640901,5.17308932466493,0.947457058852424,0.162964976442026,1.18821560042632,1.87752198630802,1.67506257441816,3.09456733151818,0.975668239288994,2.20689201748667,1.55025282754142,1.75400245523236,3.76885623846197,2.59027472798843,1.3018415272336,4.52373851817817,1.08781136763742,0.983528546038072,0.827810238914197,0.80275294993896,0.93769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| ||
|EntrezGene=100041703,100043318,100043507,100048410,14707 | |||
|HGNC= | |||
|MCL_coexpression_id=380 | |||
|UniProt=Q80SZ7 | |||
|association_with_transcript=-69bp_to_ENSMUST00000090031_5end | |||
|description=CAGE_peak_3_at_Gm13342_5end,CAGE_peak_3_at_Gm15776_5end,CAGE_peak_3_at_Gm4356_5end,CAGE_peak_3_at_Gng5_5end,CAGE_peak_3_at_LOC100048410_5end | |||
|id=chr3:146162669..146162728,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.32e-11!59;UBERON:0004923!4.15e-10!24;UBERON:0000160!3.00e-09!43;UBERON:0000344!3.75e-08!15;UBERON:0001242!3.11e-07!13;UBERON:0000060!3.11e-07!13;UBERON:0001262!3.11e-07!13;UBERON:0004786!3.11e-07!13;UBERON:0004119!5.28e-07!130;UBERON:0000925!5.28e-07!130;UBERON:0006595!5.28e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,9.25e-11,47;UBERON:0004923,2.69e-10,24;UBERON:0000160,1.97e-09,31;UBERON:0000344,2.69e-08,15;UBERON:0001242,2.33e-07,13;UBERON:0001262,2.33e-07,13;UBERON:0004786,2.33e-07,13 | |||
|phase1_expression=1.92178616525753,7.67745896806594,10.4649825059593,7.86406949397758,4.50806156951712,4.19698179779725,1.63528848416868,1.16210991097419,0,0.234064526321993,0,0.0797721589953364,0.856003649656029,0.961624426608971,5.66286595086627,12.5534665781692,11.8925519281785,1.10411757875383,1.7824876368746,2.12194825899015,2.21112554392781,0.695036658406197,0.522399578277871,5.91971964335605,5.27641346454491,16.0784949952206,6.8921919385452,7.11055067863434,10.6413114895569,8.56902441183765,5.32153225572731,0,1.23012957516914,0,7.51014211353314,7.64679368649065,5.51257261908397,17.5783284909501,32.8160844699996,18.3233310390829,27.6468799374577,32.1031377930469,37.86980753643,0.881277725829041,1.11514624341466,1.28482726513177,4.69434806608824,1.30815093828268,1.75748946187577,2.3331587888914,1.81982348112971,2.87505128729943,2.18117387875057,0.725362142011344,1.34437519656986,1.54355661621568,1.43266719969378,1.54701627683233,1.82084814773638,0.528990979272033,2.53532561402472,4.74382344896785,0.889294796111139,9.89889689009539,10.8775299882367,9.2362414942993,2.99600110518405,4.2264013585371,1.14058573539325,0.945041568321835,1.26194976810829,2.28520787523043,0.662605622854841,0.734944795289724,1.53352753629178,1.83843757322004,1.10115880999389,0.383062014255563,0.307213066512487,1.58263545276233,1.37231465403614,1.56274011167028,2.79182999001381,0,1.5279824777681,1.47314292736834,0.854230084794618,0.372798891650601,3.48340489332647,2.34271836331035,2.89864488701678,2.58127163094416,1.3599426674155,1.07940638327563,1.29955283489534,1.79210754838934,1.68533304158102,1.87473354835864,2.07828803682295,2.12003744706204,1.97180787687353,1.28326477414318,2.54805239706646,0,2.59789249213457,1.01343946190039,2.02209778005913,2.51204535381932,1.03575153458869,1.33597925158342,2.77576522825817,1.82679286987285,0.691846491768175,1.05505848386836,1.29347577849275,0.628332956648377,2.96633961281249,0.722996784599558,1.76922110389975,0.970601099684455,3.5334642953663,1.45462575940567,9.31958806090611,0,0.209446706813455,6.38642638021478,2.75574786363617,3.59941638596045,2.54140454146129,0.748953197024114,0,0.251308704225729,0.869121600961382,1.02286182932132,1.45451631191692,0.648965052271031,0.81471491080253,2.48813941220186,5.55990068554084,0.841767423545896,1.04096354370163,1.83921683546778,0.900310649026746,1.20563854268572,0.884474488967262,0.768682321709099,1.03071897015702,1.29351685369508,0.646703978798527,1.13463648100692,0.879755620819744,1.31517439456545,1.39023624612799,5.57203466435466,3.08673204611915,1.39323986772945,4.91549231119264,1.80143534980301,2.84163499395593,1.44988040774851,1.17263029990548,2.16074473753218,1.18372367792605,1.57411385397923,2.31400669331067,1.39520366850245,1.3413670069981,1.98501082024188,0.987359099480883,2.29834449710733,1.86458261955468,1.16959989940266,0.658650345873152,0.939444931322602,0.210289948564127,0.411618449517138,6.60837565967596,5.02456076660734,0.426576501070468,0.696710015581316,0.902072229254653,2.42020229548011,4.22518283305254,6.08722003560189,4.2707615539006,2.9645811850322,6.28338022000674,5.17286827306992,4.874102177978,2.69645822596266,5.40345124686736,3.18626037206988,1.89667900953082,1.82797620175566,1.1270773567308,1.01825663922657,0.387904974335251,1.40271639780637,1.20149420536089,2.65698266363284,0.941992367048249,1.48076596706161,0.592905254174298,3.00321190288969,5.11053387294328,6.74586337154561,6.08580364165509,6.75296047306767,7.38414970166117,6.32931502391783,4.05338066937588,3.0201755450689,10.0637744569148,1.86070473834252,2.18426371180192,1.76805214562978,1.97337154874103,1.4473305640901,5.17308932466493,0.947457058852424,0.162964976442026,1.18821560042632,1.87752198630802,1.67506257441816,3.09456733151818,0.975668239288994,2.20689201748667,1.55025282754142,1.75400245523236,3.76885623846197,2.59027472798843,1.3018415272336,4.52373851817817,1.08781136763742,0.983528546038072,0.827810238914197,0.80275294993896,0.937693492737625,1.63934945376675,1.26235463602186,0.631016438832513,0.780877488593277,0,0,0.668396022247182,0.566153061577665,0.404810701674894,0.584511715822624,0,0.321321316421807,1.27746076687442,1.42452482933804,2.28041743095006,1.48473110675282,2.65490276679926,1.45668381692989,2.11626489875326,2.64047111658257,3.83892460745005,1.84461088766356,2.58428293168221,1.81766864738753,2.49548164869305,1.26414703174326,1.05418608574999,3.09406629744561,1.02131881726136,0.540183282093931,1.29358683782755,1.28602221018955,1.95074257006501,1.24858172321449,1.81003922662333,3.34911444026059,3.52007562095566,3.1774810629573,0,2.14352128823924,2.9063596805263,2.53314284698255,3.34242563208782,3.77524069413641,1.7488850197791,0.927126510052548,5.29699730473343,1.65109494370578,2.96311243791539,6.2161590811548,2.32380187125743,5.0331198105435,2.37969801991397,2.79902904647316,2.76399947608848,6.68269432610579,0.474503990371703,1.21991680276109,0.972048067396211,2.50905955217362,2.40198820120795,3.37160865962052,2.56225712748541,3.40282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| |||
|short_description=p3@Gm13342,p3@Gm15776,p3@Gm4356,p3@Gng5,p3@LOC100048410 | |||
}} |
Revision as of 01:46, 14 September 2013
Short description: | p3@Gm13342, p3@Gm15776, p3@Gm4356, p3@Gng5, p3@LOC100048410 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm13342_5end, CAGE_peak_3_at_Gm15776_5end, CAGE_peak_3_at_Gm4356_5end, CAGE_peak_3_at_Gng5_5end, CAGE_peak_3_at_LOC100048410_5end |
Coexpression cluster: | MCL_coexpression_mm9:380 |
Association with transcript: | -69bp_to_ENSMUST00000090031_5end |
EntrezGene: | 100041703,100043318,100043507,100048410,14707 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 9.25e-11 | 47 |
organ component layer | 2.69e-10 | 24 |
intestine | 1.97e-09 | 31 |
mucosa | 2.69e-08 | 15 |
intestinal mucosa | 2.33e-07 | 13 |
wall of intestine | 2.33e-07 | 13 |
gastrointestinal system mucosa | 2.33e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.