FFCP PHASE1:Mm9::chr3:153512829..153512857,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=322|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:153512829..153512857,+|id=chr3:153512829..153512857,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,7.46e-12,3;CL:0002006,7.46e-12,3;CL:0002024,7.46e-12,3;CL:0000050,1.51e-10,9;CL:0000839,3.30e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!1.32e-07!6;UBERON:0004457!1.32e-07!6;UBERON:0000042!1.32e-07!6;UBERON:0004854!1.32e-07!6;UBERON:0009034!1.32e-07!6;UBERON:0002095!1.32e-07!6;UBERON:0004782!1.32e-07!6;UBERON:0003281!1.32e-07!6;UBERON:0009664!1.32e-07!6;UBERON:0002296!1.32e-07!6;UBERON:0005602!1.32e-07!6;UBERON:0001179!1.32e-07!6;UBERON:0006293!1.32e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.47e-21,6;UBERON:0004457,1.47e-21,6;UBERON:0000042,1.47e-21,6;UBERON:0004854,1.47e-21,6;UBERON:0009034,1.47e-21,6;UBERON:0002095,1.47e-21,6;UBERON:0004782,1.47e-21,6;UBERON:0003281,1.47e-21,6;UBERON:0009664,1.47e-21,6;UBERON:0002296,1.47e-21,6;UBERON:0005602,1.47e-21,6;UBERON:0001179,1.47e-21,6;UBERON:0006293,1.47e-21,6;UBERON:0003887,9.96e-13,10;UBERON:0005172,1.02e-08,49;UBERON:0005173,1.02e-08,49;UBERON:0002417,1.02e-08,49;UBERON:0000916,1.02e-08,49;UBERON:0000945,9.67e-08,16;UBERON:0010039,9.67e-08,16|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,3.33109761815663,3.64455481301687,4.19737126876888,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,6.98533740805594,6.1506478758457,0,0,0,0,0.837063261473815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.693941307064543,0,0.461230994512117,0.150722640552623,0,0,0,0,1.76922110389975,0.970601099684455,1.32504911076236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,1.11218899690239,1.0447564995665,0.823128545631774,0,0,0,0,0.621377317606506,0.234526059981096,0.180062061461015,0,0.393528463494808,0.308534225774757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0,0,0,0,0,0,6.50695912292767,6.09332884850929,4.49724224769707,3.44862206360455,2.41177159752417,2.5462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0.241251699712623,0.477489376012546,0,0.291480836629851,0,3.58828849675491,1.65109494370578,3.70389054739423,3.39063222608444,4.10082683163076,3.20289442489132,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0.516639293910924,0,0,0,0,0,0,0,0,0.718976700153791,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,2.04880326904961,0.729320151204882,1.25767897576789,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,0,0,0.188626341386076,0.468207537349412,0.576226371643824,0.402048282689293,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0.685738504770831,1.06485483695602,0.238436189947321,0.290692833264657,0,0.507687647350059,0.365855945745545,0,0.135804113845862,0,0.474540072496697,0.197008964751127,1.22769312950907,0.619747364743864,0.385813221962283,0.749431733813838,0.467863216890817,0,0,0,0.695603506861264|short_description=p@chr3:153512829..153512857,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=322 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:153512829..153512857,+ | |||
|id=chr3:153512829..153512857,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,7.46e-12,3;CL:0002006,7.46e-12,3;CL:0002024,7.46e-12,3;CL:0000050,1.51e-10,9;CL:0000839,3.30e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.32e-07!6;UBERON:0004457!1.32e-07!6;UBERON:0000042!1.32e-07!6;UBERON:0004854!1.32e-07!6;UBERON:0009034!1.32e-07!6;UBERON:0002095!1.32e-07!6;UBERON:0004782!1.32e-07!6;UBERON:0003281!1.32e-07!6;UBERON:0009664!1.32e-07!6;UBERON:0002296!1.32e-07!6;UBERON:0005602!1.32e-07!6;UBERON:0001179!1.32e-07!6;UBERON:0006293!1.32e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.47e-21,6;UBERON:0004457,1.47e-21,6;UBERON:0000042,1.47e-21,6;UBERON:0004854,1.47e-21,6;UBERON:0009034,1.47e-21,6;UBERON:0002095,1.47e-21,6;UBERON:0004782,1.47e-21,6;UBERON:0003281,1.47e-21,6;UBERON:0009664,1.47e-21,6;UBERON:0002296,1.47e-21,6;UBERON:0005602,1.47e-21,6;UBERON:0001179,1.47e-21,6;UBERON:0006293,1.47e-21,6;UBERON:0003887,9.96e-13,10;UBERON:0005172,1.02e-08,49;UBERON:0005173,1.02e-08,49;UBERON:0002417,1.02e-08,49;UBERON:0000916,1.02e-08,49;UBERON:0000945,9.67e-08,16;UBERON:0010039,9.67e-08,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,3.33109761815663,3.64455481301687,4.19737126876888,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,6.98533740805594,6.1506478758457,0,0,0,0,0.837063261473815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.693941307064543,0,0.461230994512117,0.150722640552623,0,0,0,0,1.76922110389975,0.970601099684455,1.32504911076236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,1.11218899690239,1.0447564995665,0.823128545631774,0,0,0,0,0.621377317606506,0.234526059981096,0.180062061461015,0,0.393528463494808,0.308534225774757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0,0,0,0,0,0,6.50695912292767,6.09332884850929,4.49724224769707,3.44862206360455,2.41177159752417,2.5462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0.241251699712623,0.477489376012546,0,0.291480836629851,0,3.58828849675491,1.65109494370578,3.70389054739423,3.39063222608444,4.10082683163076,3.20289442489132,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0.516639293910924,0,0,0,0,0,0,0,0,0.718976700153791,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,2.04880326904961,0.729320151204882,1.25767897576789,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,0,0,0.188626341386076,0.468207537349412,0.576226371643824,0.402048282689293,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0.685738504770831,1.06485483695602,0.238436189947321,0.290692833264657,0,0.507687647350059,0.365855945745545,0,0.135804113845862,0,0.474540072496697,0.197008964751127,1.22769312950907,0.619747364743864,0.385813221962283,0.749431733813838,0.467863216890817,0,0,0,0.695603506861264 | |||
|short_description=p@chr3:153512829..153512857,+ | |||
}} |
Revision as of 01:52, 14 September 2013
Short description: | p@chr3:153512829..153512857, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:153512829..153512857, + |
Coexpression cluster: | MCL_coexpression_mm9:322 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 7.46e-12 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 7.46e-12 | 3 |
Kit-positive megakaryocyte progenitor cell | 7.46e-12 | 3 |
megakaryocyte-erythroid progenitor cell | 1.51e-10 | 9 |
myeloid lineage restricted progenitor cell | 3.30e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.47e-21 | 6 |
cavity lining | 1.47e-21 | 6 |
serous membrane | 1.47e-21 | 6 |
gastrointestinal system mesentery | 1.47e-21 | 6 |
stomach region | 1.47e-21 | 6 |
mesentery | 1.47e-21 | 6 |
gastrointestinal system serosa | 1.47e-21 | 6 |
mesentery of stomach | 1.47e-21 | 6 |
gut mesentery | 1.47e-21 | 6 |
dorsal mesentery | 1.47e-21 | 6 |
dorsal mesogastrium | 1.47e-21 | 6 |
peritoneal cavity | 1.47e-21 | 6 |
spleen primordium | 1.47e-21 | 6 |
intraembryonic coelom | 9.96e-13 | 10 |
abdomen element | 1.02e-08 | 49 |
abdominal segment element | 1.02e-08 | 49 |
abdominal segment of trunk | 1.02e-08 | 49 |
abdomen | 1.02e-08 | 49 |
stomach | 9.67e-08 | 16 |
food storage organ | 9.67e-08 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.