FFCP PHASE1:Mm9::chr3:80840560..80840660,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54635|HGNC=|MCL_coexpression_id=2381|UniProt=Q8CI19|association_with_transcript=222bp_to_ENSMUST00000029652,NM_019971,uc008poi.1,uc008poj.1,uc008pok.1_5end|description=CAGE_peak_1_at_Pdgfc_5end|id=chr3:80840560..80840660,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!1.58e-10!333;UBERON:0000922!3.40e-07!328|ontology_enrichment_uberon_v019_2=|phase1_expression=20.3389035823088,7.32848356042658,6.82498859084304,14.5182821427278,16.0286633582831,0,0.467225281191051,0,0,0,0,0,0,0,2.6648780945253,1.41732687172878,2.09868563438444,0.157731082679119,0.274228867211478,0.42438965179803,7.39876624314307,0,0,0.95995453676044,0,2.29692785646008,2.15380998079537,2.80112602491656,10.0712412311878,5.04060259519861,1.77384408524244,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,6.54663453473002,8.51566222243922,3.48738829107195,14.8654355426127,9.3750817243592,15.1583466086786,19.0541301092798,14.4186014274123,30.188038516644,0,0,0,3.60163210450326,1.43266719969378,15.9858348606007,7.48570905180512,4.23192783417626,6.97214543856797,6.09920157724438,4.4464739805557,8.99899717281399,12.8552627133707,11.3676818391376,9.58720353658895,9.22123932771731,4.35496371695606,3.64516033495565,4.20649922702764,6.28432165688368,9.27647871996777,4.16468717330844,3.64212789869298,2.75765635983006,3.30347642998166,3.70293280447044,3.5329502648936,1.71452174049252,2.10421580285542,0.52091337055676,2.79182999001381,3.93933827022176,5.34793867218835,7.36571463684169,5.12538050876771,3.91438836233131,1.36307147999731,2.56943304363071,16.5222758559956,3.44169550792555,0,3.77792234146472,5.84798775702902,3.58421509677868,5.61777680527007,5.96506129023202,4.1565760736459,5.65343319216544,46.0557982669745,10.2661181931454,17.8363667794652,14.2213340630666,8.22665955842614,7.09407623330276,4.04419556011827,6.05174562511018,8.02707439306232,11.2816025689267,8.15381035800839,9.43842982767638,10.1470818792666,6.78251882486802,16.6975964132701,10.6816602630224,13.1013332899218,23.4250958210257,5.30766331169925,19.8973225435313,9.71702681225732,16.9706338597328,14.9113408974498,2.92780797011547,4.39838084308256,8.68553987709211,0.239630249011841,0.599902730993408,0.127070227073065,5.69204429738326,4.57500602818627,3.14135880282161,5.21472960576829,6.90431734791892,4.36354893575076,4.86723789203273,50.3086457420562,18.785452562124,6.57079171927554,5.05060454127538,25.6337272636526,18.6220704591113,26.4691330813863,16.1254155084215,20.0707672496417,18.8327168818729,15.554486276915,8.2785078636485,63.3769899222556,65.0524915777298,53.1372394975126,32.0025769344259,30.3071501655902,17.0643561595862,15.2278780941878,22.6899064173082,0,0,0,10.5634143993106,13.6025114789036,7.92273070428465,10.4167683657493,7.67380503814875,5.86215028972037,5.8133486187602,6.70683503499048,6.53885917256149,5.10135534731789,1.64167464079095,3.81023404865522,4.09359964790931,5.92785311285837,5.2340503316545,3.99550902271842,3.70456604565424,12.2254949704005,4.23120906661671,31.5666610792146,22.0624838267417,13.2733485161756,13.1094291005173,7.33847544688072,9.70150693174052,9.96511029243474,12.1877226495768,12.8180956488137,16.9113001234978,11.8928093142663,8.98819408654222,6.70027954611552,7.96565093017469,27.5018456381968,15.994791765362,23.6686244913469,21.5870407516033,20.1710586654331,25.1787593406244,16.8841554121767,14.0229640580622,12.0889020437859,12.7099078839455,5.33614728756868,4.83850806576673,2.35870794135844,0.449724224769707,0.811440485554012,0.241177159752417,0.763877555344259,3.45235364940973,2.7562988551756,0.823684239564244,10.0637744569148,3.34926852901653,4.05648975048929,4.79899868099512,6.81710171383266,4.3419916922703,3.51031061316549,18.759649765278,14.6668478797823,15.7862929770925,10.0916806764056,8.04030035720716,9.52174563544055,4.87834119644497,5.2019597555043,2.87904096543407,2.07291199254733,2.45794972073607,1.89953480052485,2.16973587872267,4.52373851817817,3.26343410291226,16.7199852826472,29.2492951083016,5.77982123956051,7.14991288212439,23.2787622434879,8.58401152494868,11.6738041184015,9.76096860741596,8.83235930704476,18.8785350382516,15.1503098376028,16.1353622549635,12.1443210502468,14.6127928955656,12.2539211163422,8.9969968598106,27.6783166156124,29.0246933977626,51.9609400337908,37.6131880377381,1.32745138339963,8.25454162926937,6.95344181018927,4.33791683438566,6.496641643377,11.0676653259814,13.9551278310839,9.08834323693764,11.7644134866958,10.1131762539461,5.27093042874994,6.18813259489121,1.70219802876894,19.4465981553815,20.1799546701097,18.8616590827801,20.2167866352192,14.0911365905636,13.8221177305782,11.2652031172402,8.44818149029357,7.62595455109753,9.2621927183084,23.4138479176902,11.4639742954093,8.08193194037288,2.86493625607528,5.41664969158702,15.4484843413821,5.19190845629427,1.87957968877638,7.22354037871279,4.44466865687308,2.63715839806567,0.820165366326151,1.37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| ||
|EntrezGene=54635 | |||
|HGNC= | |||
|MCL_coexpression_id=2381 | |||
|UniProt=Q8CI19 | |||
|association_with_transcript=222bp_to_ENSMUST00000029652,NM_019971,uc008poi.1,uc008poj.1,uc008pok.1_5end | |||
|description=CAGE_peak_1_at_Pdgfc_5end | |||
|id=chr3:80840560..80840660,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.58e-10!333;UBERON:0000922!3.40e-07!328 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=20.3389035823088,7.32848356042658,6.82498859084304,14.5182821427278,16.0286633582831,0,0.467225281191051,0,0,0,0,0,0,0,2.6648780945253,1.41732687172878,2.09868563438444,0.157731082679119,0.274228867211478,0.42438965179803,7.39876624314307,0,0,0.95995453676044,0,2.29692785646008,2.15380998079537,2.80112602491656,10.0712412311878,5.04060259519861,1.77384408524244,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,6.54663453473002,8.51566222243922,3.48738829107195,14.8654355426127,9.3750817243592,15.1583466086786,19.0541301092798,14.4186014274123,30.188038516644,0,0,0,3.60163210450326,1.43266719969378,15.9858348606007,7.48570905180512,4.23192783417626,6.97214543856797,6.09920157724438,4.4464739805557,8.99899717281399,12.8552627133707,11.3676818391376,9.58720353658895,9.22123932771731,4.35496371695606,3.64516033495565,4.20649922702764,6.28432165688368,9.27647871996777,4.16468717330844,3.64212789869298,2.75765635983006,3.30347642998166,3.70293280447044,3.5329502648936,1.71452174049252,2.10421580285542,0.52091337055676,2.79182999001381,3.93933827022176,5.34793867218835,7.36571463684169,5.12538050876771,3.91438836233131,1.36307147999731,2.56943304363071,16.5222758559956,3.44169550792555,0,3.77792234146472,5.84798775702902,3.58421509677868,5.61777680527007,5.96506129023202,4.1565760736459,5.65343319216544,46.0557982669745,10.2661181931454,17.8363667794652,14.2213340630666,8.22665955842614,7.09407623330276,4.04419556011827,6.05174562511018,8.02707439306232,11.2816025689267,8.15381035800839,9.43842982767638,10.1470818792666,6.78251882486802,16.6975964132701,10.6816602630224,13.1013332899218,23.4250958210257,5.30766331169925,19.8973225435313,9.71702681225732,16.9706338597328,14.9113408974498,2.92780797011547,4.39838084308256,8.68553987709211,0.239630249011841,0.599902730993408,0.127070227073065,5.69204429738326,4.57500602818627,3.14135880282161,5.21472960576829,6.90431734791892,4.36354893575076,4.86723789203273,50.3086457420562,18.785452562124,6.57079171927554,5.05060454127538,25.6337272636526,18.6220704591113,26.4691330813863,16.1254155084215,20.0707672496417,18.8327168818729,15.554486276915,8.2785078636485,63.3769899222556,65.0524915777298,53.1372394975126,32.0025769344259,30.3071501655902,17.0643561595862,15.2278780941878,22.6899064173082,0,0,0,10.5634143993106,13.6025114789036,7.92273070428465,10.4167683657493,7.67380503814875,5.86215028972037,5.8133486187602,6.70683503499048,6.53885917256149,5.10135534731789,1.64167464079095,3.81023404865522,4.09359964790931,5.92785311285837,5.2340503316545,3.99550902271842,3.70456604565424,12.2254949704005,4.23120906661671,31.5666610792146,22.0624838267417,13.2733485161756,13.1094291005173,7.33847544688072,9.70150693174052,9.96511029243474,12.1877226495768,12.8180956488137,16.9113001234978,11.8928093142663,8.98819408654222,6.70027954611552,7.96565093017469,27.5018456381968,15.994791765362,23.6686244913469,21.5870407516033,20.1710586654331,25.1787593406244,16.8841554121767,14.0229640580622,12.0889020437859,12.7099078839455,5.33614728756868,4.83850806576673,2.35870794135844,0.449724224769707,0.811440485554012,0.241177159752417,0.763877555344259,3.45235364940973,2.7562988551756,0.823684239564244,10.0637744569148,3.34926852901653,4.05648975048929,4.79899868099512,6.81710171383266,4.3419916922703,3.51031061316549,18.759649765278,14.6668478797823,15.7862929770925,10.0916806764056,8.04030035720716,9.52174563544055,4.87834119644497,5.2019597555043,2.87904096543407,2.07291199254733,2.45794972073607,1.89953480052485,2.16973587872267,4.52373851817817,3.26343410291226,16.7199852826472,29.2492951083016,5.77982123956051,7.14991288212439,23.2787622434879,8.58401152494868,11.6738041184015,9.76096860741596,8.83235930704476,18.8785350382516,15.1503098376028,16.1353622549635,12.1443210502468,14.6127928955656,12.2539211163422,8.9969968598106,27.6783166156124,29.0246933977626,51.9609400337908,37.6131880377381,1.32745138339963,8.25454162926937,6.95344181018927,4.33791683438566,6.496641643377,11.0676653259814,13.9551278310839,9.08834323693764,11.7644134866958,10.1131762539461,5.27093042874994,6.18813259489121,1.70219802876894,19.4465981553815,20.1799546701097,18.8616590827801,20.2167866352192,14.0911365905636,13.8221177305782,11.2652031172402,8.44818149029357,7.62595455109753,9.2621927183084,23.4138479176902,11.4639742954093,8.08193194037288,2.86493625607528,5.41664969158702,15.4484843413821,5.19190845629427,1.87957968877638,7.22354037871279,4.44466865687308,2.63715839806567,0.820165366326151,1.37266903923914,2.20971958992012,1.39951452323658,1.24379976423981,11.4560474161814,29.261079406255,11.5892096262304,13.3926622619034,15.2634456090562,13.9752040797554,12.9469772529428,11.1582165229204,8.37619014348895,7.90651337079936,18.6401793926078,2.25477175473676,13.3069725979141,10.9202603701684,8.75030347548214,10.3327858782185,8.95467465101124,15.1390837853023,17.9682051084651,9.96163772044253,7.00593950395418,4.60848010012585,3.16011120628178,6.28448167399509,4.31386020092274,2.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| |||
|short_description=p1@Pdgfc | |||
}} | |||
Revision as of 02:35, 14 September 2013
| Short description: | p1@Pdgfc |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Pdgfc_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2381 |
| Association with transcript: | 222bp_to_ENSMUST00000029652, NM_019971, uc008poi.1, uc008poj.1, uc008pok.1_5end |
| EntrezGene: | Pdgfc |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
