FFCP PHASE1:Hg19::chr7:98870790..98870795,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84176|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=31038|TSSclassifier=W|UniProt=|association_with_transcript=-128bp_to_ENST00000330888,NR_002147,uc003upw.2_5end|coexpression_cluster_id=C186|description=CAGE_peak_7_at_MYH16_5end|id=chr7:98870790..98870795,+|ontology_enrichment_celltype=CL:1000415!6.96e-21!2|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:4929!3.81e-21!2;DOID:4468!4.66e-21!2;DOID:1749!2.24e-12!14;DOID:305!5.66e-10!106;DOID:0050687!1.55e-07!143;DOID:299!2.28e-07!25|ontology_enrichment_disease_v019=DOID:4929;4.52e-50;2!DOID:1749;1.86e-08;14!DOID:3119;2.00e-08;14|ontology_enrichment_disease_v019_2=DOID:4929,4.52e-50,2;DOID:1749,1.86e-08,14;DOID:3119,2.00e-08,14|ontology_enrichment_uberon=UBERON:0004913!9.91e-41!1;UBERON:0003703!9.91e-41!1;UBERON:0001174!9.91e-41!1;UBERON:0004914!9.91e-41!1;UBERON:0000997!2.21e-40!1;UBERON:0005056!2.21e-40!1;UBERON:0002294!1.61e-23!7;UBERON:0001173!1.61e-23!7;UBERON:0004912!1.61e-23!7;UBERON:0002110!2.09e-14!3;UBERON:0006242!2.09e-14!3;UBERON:0002394!2.80e-11!4;UBERON:0003928!2.80e-11!4;UBERON:0009497!2.43e-07!25;UBERON:0000015!2.43e-07!25;UBERON:0002423!2.43e-07!25;UBERON:0006235!2.43e-07!25;UBERON:0004161!2.43e-07!25|ontology_enrichment_uberon_v019=UBERON:0004913;2.55e-98;1!UBERON:0003703;2.55e-98;1!UBERON:0001174;2.55e-98;1!UBERON:0004914;2.55e-98;1!UBERON:0002114;5.96e-34;2!UBERON:0002394;7.14e-26;4!UBERON:0003928;7.14e-26;4!UBERON:0002108;5.15e-21;4!UBERON:0002294;1.91e-15;7!UBERON:0001173;1.91e-15;7!UBERON:0000058;3.02e-11;10!UBERON:0000160;7.60e-07;17|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.55e-98,1;UBERON:0003703,2.55e-98,1;UBERON:0001174,2.55e-98,1;UBERON:0004914,2.55e-98,1;UBERON:0002114,5.96e-34,2;UBERON:0002108,5.15e-21,4;UBERON:0002394,9.07e-18,6;UBERON:0003928,9.07e-18,6;UBERON:0002294,2.45e-12,9;UBERON:0001173,2.45e-12,9;UBERON:0004912,2.45e-12,9;UBERON:0000160,7.60e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06998520703863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6455307666178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@MYH16}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=84176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=31038 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-128bp_to_ENST00000330888,NR_002147,uc003upw.2_5end | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_7_at_MYH16_5end | |||
|id=chr7:98870790..98870795,+ | |||
|ontology_enrichment_celltype=CL:1000415!6.96e-21!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!3.81e-21!2;DOID:4468!4.66e-21!2;DOID:1749!2.24e-12!14;DOID:305!5.66e-10!106;DOID:0050687!1.55e-07!143;DOID:299!2.28e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:4929;4.52e-50;2!DOID:1749;1.86e-08;14!DOID:3119;2.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,4.52e-50,2;DOID:1749,1.86e-08,14;DOID:3119,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004913!9.91e-41!1;UBERON:0003703!9.91e-41!1;UBERON:0001174!9.91e-41!1;UBERON:0004914!9.91e-41!1;UBERON:0000997!2.21e-40!1;UBERON:0005056!2.21e-40!1;UBERON:0002294!1.61e-23!7;UBERON:0001173!1.61e-23!7;UBERON:0004912!1.61e-23!7;UBERON:0002110!2.09e-14!3;UBERON:0006242!2.09e-14!3;UBERON:0002394!2.80e-11!4;UBERON:0003928!2.80e-11!4;UBERON:0009497!2.43e-07!25;UBERON:0000015!2.43e-07!25;UBERON:0002423!2.43e-07!25;UBERON:0006235!2.43e-07!25;UBERON:0004161!2.43e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.55e-98;1!UBERON:0003703;2.55e-98;1!UBERON:0001174;2.55e-98;1!UBERON:0004914;2.55e-98;1!UBERON:0002114;5.96e-34;2!UBERON:0002394;7.14e-26;4!UBERON:0003928;7.14e-26;4!UBERON:0002108;5.15e-21;4!UBERON:0002294;1.91e-15;7!UBERON:0001173;1.91e-15;7!UBERON:0000058;3.02e-11;10!UBERON:0000160;7.60e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.55e-98,1;UBERON:0003703,2.55e-98,1;UBERON:0001174,2.55e-98,1;UBERON:0004914,2.55e-98,1;UBERON:0002114,5.96e-34,2;UBERON:0002108,5.15e-21,4;UBERON:0002394,9.07e-18,6;UBERON:0003928,9.07e-18,6;UBERON:0002294,2.45e-12,9;UBERON:0001173,2.45e-12,9;UBERON:0004912,2.45e-12,9;UBERON:0000160,7.60e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06998520703863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6455307666178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@MYH16 | |||
}} |
Revision as of 02:42, 14 September 2013
Short description: | p7@MYH16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_MYH16_5end |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | -128bp_to_ENST00000330888, NR_002147, uc003upw.2_5end |
EntrezGene: | MYH16 |
HGNC: | 31038 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.55e-98 | 1 |
extrahepatic bile duct | 2.55e-98 | 1 |
common bile duct | 2.55e-98 | 1 |
duodenal papilla | 2.55e-98 | 1 |
duodenum | 5.96e-34 | 2 |
small intestine | 5.15e-21 | 4 |
bile duct | 9.07e-18 | 6 |
digestive system duct | 9.07e-18 | 6 |
biliary system | 2.45e-12 | 9 |
biliary tree | 2.45e-12 | 9 |
biliary bud | 2.45e-12 | 9 |
intestine | 7.60e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 4.52e-50 | 2 |
squamous cell carcinoma | 1.86e-08 | 14 |
gastrointestinal system cancer | 2.00e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.