FFCP PHASE1:Mm9::chr4:125167712..125167737,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14807|HGNC=|MCL_coexpression_id=593|UniProt=B1AS29|association_with_transcript=-206bp_to_ENSMUST00000030676_5end|description=CAGE_peak_2_at_Grik3_5end|id=chr4:125167712..125167737,+|ontology_enrichment_celltype=CL:0000540!1.54e-22!33;CL:0000047!1.54e-22!33;CL:0000031!1.54e-22!33;CL:0000404!1.54e-22!33;CL:0000221!9.35e-20!44;CL:0000133!9.35e-20!44;CL:0002319!1.90e-19!43;CL:0000393!3.99e-16!39;CL:0000211!3.99e-16!39;CL:0000117!2.72e-15!23;CL:0000337!2.72e-15!23;CL:0000055!7.23e-14!50;CL:0000107!2.26e-08!9|ontology_enrichment_celltype_v019_2=CL:0000540,2.06e-30,33;CL:0000047,2.06e-30,33;CL:0000031,2.06e-30,33;CL:0000404,2.06e-30,33;CL:0000221,6.31e-25,44;CL:0000133,6.31e-25,44;CL:0002319,1.76e-24,43;CL:0000393,9.73e-24,39;CL:0000211,9.73e-24,39;CL:0000117,2.68e-21,23;CL:0000337,2.68e-21,23;CL:0000107,2.37e-11,9;CL:0002321,7.35e-11,70;CL:0002609,3.30e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.32e-38!75;UBERON:0001016!3.32e-38!75;UBERON:0001017!6.96e-38!73;UBERON:0005743!6.96e-38!73;UBERON:0004121!1.02e-33!102;UBERON:0000924!1.02e-33!102;UBERON:0006601!1.02e-33!102;UBERON:0001049!3.16e-25!52;UBERON:0005068!3.16e-25!52;UBERON:0006241!3.16e-25!52;UBERON:0007135!3.16e-25!52;UBERON:0002346!6.75e-25!71;UBERON:0003075!6.75e-25!71;UBERON:0007284!6.75e-25!71;UBERON:0000033!1.73e-24!63;UBERON:0000955!4.76e-24!50;UBERON:0006238!4.76e-24!50;UBERON:0002616!2.62e-23!49;UBERON:0003056!2.44e-22!49;UBERON:0003080!7.77e-21!40;UBERON:0002780!2.27e-20!39;UBERON:0001890!2.27e-20!39;UBERON:0006240!2.27e-20!39;UBERON:0002020!5.66e-19!34;UBERON:0002791!7.51e-16!29;UBERON:0003528!7.51e-16!29;UBERON:0001893!7.51e-16!29;UBERON:0007811!1.72e-11!86;UBERON:0000956!5.76e-11!21;UBERON:0001869!5.76e-11!21;UBERON:0000203!5.76e-11!21;UBERON:0000153!2.81e-10!94;UBERON:0002619!1.43e-08!17;UBERON:0002410!2.26e-08!9;UBERON:0000010!3.14e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.32e-51,73;UBERON:0001016,4.04e-51,75;UBERON:0004121,1.30e-42,95;UBERON:0000924,1.30e-42,95;UBERON:0006601,1.30e-42,95;UBERON:0002346,7.53e-37,64;UBERON:0003075,7.53e-37,64;UBERON:0007284,7.53e-37,64;UBERON:0000073,7.67e-37,54;UBERON:0001049,8.86e-35,52;UBERON:0005068,8.86e-35,52;UBERON:0006241,8.86e-35,52;UBERON:0007135,8.86e-35,52;UBERON:0010371,4.34e-31,73;UBERON:0000955,1.62e-30,47;UBERON:0006238,1.62e-30,47;UBERON:0002616,1.79e-29,46;UBERON:0003080,9.46e-29,40;UBERON:0002780,4.42e-28,39;UBERON:0001890,4.42e-28,39;UBERON:0006240,4.42e-28,39;UBERON:0003056,7.32e-27,49;UBERON:0002020,4.71e-26,34;UBERON:0003528,1.44e-21,29;UBERON:0002791,1.44e-21,29;UBERON:0001893,1.44e-21,29;UBERON:0010314,1.08e-20,92;UBERON:0000956,1.43e-14,21;UBERON:0001869,1.43e-14,21;UBERON:0000203,1.43e-14,21;UBERON:0002410,2.37e-11,9;UBERON:0002619,3.71e-11,17;UBERON:0000010,3.67e-10,11;UBERON:0002021,5.47e-09,10;UBERON:0000411,5.47e-09,10;UBERON:0001950,5.47e-09,10;UBERON:0002420,3.14e-08,8;UBERON:0007245,3.14e-08,8;UBERON:0010009,3.14e-08,8;UBERON:0010011,3.14e-08,8;UBERON:0000454,3.14e-08,8;UBERON:0011216,3.68e-08,194;UBERON:0000025,2.15e-07,114;UBERON:0001894,2.63e-07,10;UBERON:0006222,2.63e-07,10|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,5.66486090406874,8.46385566835253,8.23980824558033,0,0,0,0,0,2.09720077362883,3.45796474789399,6.32506635081714,10.3954572515402,6.52007380189284,7.14127461009509,4.19650227808066,13.5964787128599,14.7602025368084,16.5459381589804,5.50579404996943,4.34136949489638,6.45147439676223,11.4741070325269,10.4295913706747,11.4600941522487,5.58365998002762,2.8138130501584,4.5839474333043,10.3120004915784,8.39992916714707,5.96478226640962,0.37863096666592,1.36028808192214,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0.247194967734374,0,0,0,0,0,0,3.80615036115011,4.81727425670947,0.255457055208591,0,0,0,3.44518470631092,7.77751024791665,8.92145900001337,6.43149984711423,5.37002460393694,4.1557608911912,5.51620294430376,0.203678727700633,0.124406970610093,0,0.210441855886474,0.390361328888111,0.459804208866946,0.180062129805349,0.60281927134286,2.85753296435577,4.61209393025459,7.77724313845749,1.55222022443409,0,0,0,0.876782929710299,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0,0.710234206755631,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0,3.15434922846191,5.14523061896422,0,0.264450566663544,0.639864751605702,1.16118335930219,0.77320476793256,0.605050573870028,0.667134131534611,0.380451252225118,0,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|EntrezGene=14807 | |||
|HGNC= | |||
|MCL_coexpression_id=593 | |||
|UniProt=B1AS29 | |||
|association_with_transcript=-206bp_to_ENSMUST00000030676_5end | |||
|description=CAGE_peak_2_at_Grik3_5end | |||
|id=chr4:125167712..125167737,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.54e-22!33;CL:0000047!1.54e-22!33;CL:0000031!1.54e-22!33;CL:0000404!1.54e-22!33;CL:0000221!9.35e-20!44;CL:0000133!9.35e-20!44;CL:0002319!1.90e-19!43;CL:0000393!3.99e-16!39;CL:0000211!3.99e-16!39;CL:0000117!2.72e-15!23;CL:0000337!2.72e-15!23;CL:0000055!7.23e-14!50;CL:0000107!2.26e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.06e-30,33;CL:0000047,2.06e-30,33;CL:0000031,2.06e-30,33;CL:0000404,2.06e-30,33;CL:0000221,6.31e-25,44;CL:0000133,6.31e-25,44;CL:0002319,1.76e-24,43;CL:0000393,9.73e-24,39;CL:0000211,9.73e-24,39;CL:0000117,2.68e-21,23;CL:0000337,2.68e-21,23;CL:0000107,2.37e-11,9;CL:0002321,7.35e-11,70;CL:0002609,3.30e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.32e-38!75;UBERON:0001016!3.32e-38!75;UBERON:0001017!6.96e-38!73;UBERON:0005743!6.96e-38!73;UBERON:0004121!1.02e-33!102;UBERON:0000924!1.02e-33!102;UBERON:0006601!1.02e-33!102;UBERON:0001049!3.16e-25!52;UBERON:0005068!3.16e-25!52;UBERON:0006241!3.16e-25!52;UBERON:0007135!3.16e-25!52;UBERON:0002346!6.75e-25!71;UBERON:0003075!6.75e-25!71;UBERON:0007284!6.75e-25!71;UBERON:0000033!1.73e-24!63;UBERON:0000955!4.76e-24!50;UBERON:0006238!4.76e-24!50;UBERON:0002616!2.62e-23!49;UBERON:0003056!2.44e-22!49;UBERON:0003080!7.77e-21!40;UBERON:0002780!2.27e-20!39;UBERON:0001890!2.27e-20!39;UBERON:0006240!2.27e-20!39;UBERON:0002020!5.66e-19!34;UBERON:0002791!7.51e-16!29;UBERON:0003528!7.51e-16!29;UBERON:0001893!7.51e-16!29;UBERON:0007811!1.72e-11!86;UBERON:0000956!5.76e-11!21;UBERON:0001869!5.76e-11!21;UBERON:0000203!5.76e-11!21;UBERON:0000153!2.81e-10!94;UBERON:0002619!1.43e-08!17;UBERON:0002410!2.26e-08!9;UBERON:0000010!3.14e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.32e-51,73;UBERON:0001016,4.04e-51,75;UBERON:0004121,1.30e-42,95;UBERON:0000924,1.30e-42,95;UBERON:0006601,1.30e-42,95;UBERON:0002346,7.53e-37,64;UBERON:0003075,7.53e-37,64;UBERON:0007284,7.53e-37,64;UBERON:0000073,7.67e-37,54;UBERON:0001049,8.86e-35,52;UBERON:0005068,8.86e-35,52;UBERON:0006241,8.86e-35,52;UBERON:0007135,8.86e-35,52;UBERON:0010371,4.34e-31,73;UBERON:0000955,1.62e-30,47;UBERON:0006238,1.62e-30,47;UBERON:0002616,1.79e-29,46;UBERON:0003080,9.46e-29,40;UBERON:0002780,4.42e-28,39;UBERON:0001890,4.42e-28,39;UBERON:0006240,4.42e-28,39;UBERON:0003056,7.32e-27,49;UBERON:0002020,4.71e-26,34;UBERON:0003528,1.44e-21,29;UBERON:0002791,1.44e-21,29;UBERON:0001893,1.44e-21,29;UBERON:0010314,1.08e-20,92;UBERON:0000956,1.43e-14,21;UBERON:0001869,1.43e-14,21;UBERON:0000203,1.43e-14,21;UBERON:0002410,2.37e-11,9;UBERON:0002619,3.71e-11,17;UBERON:0000010,3.67e-10,11;UBERON:0002021,5.47e-09,10;UBERON:0000411,5.47e-09,10;UBERON:0001950,5.47e-09,10;UBERON:0002420,3.14e-08,8;UBERON:0007245,3.14e-08,8;UBERON:0010009,3.14e-08,8;UBERON:0010011,3.14e-08,8;UBERON:0000454,3.14e-08,8;UBERON:0011216,3.68e-08,194;UBERON:0000025,2.15e-07,114;UBERON:0001894,2.63e-07,10;UBERON:0006222,2.63e-07,10 | |||
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|short_description=p2@Grik3 | |||
}} |
Revision as of 03:45, 14 September 2013
Short description: | p2@Grik3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Grik3_5end |
Coexpression cluster: | MCL_coexpression_mm9:593 |
Association with transcript: | -206bp_to_ENSMUST00000030676_5end |
EntrezGene: | Grik3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.06e-30 | 33 |
neuronal stem cell | 2.06e-30 | 33 |
neuroblast | 2.06e-30 | 33 |
electrically signaling cell | 2.06e-30 | 33 |
ectodermal cell | 6.31e-25 | 44 |
neurectodermal cell | 6.31e-25 | 44 |
neural cell | 1.76e-24 | 43 |
electrically responsive cell | 9.73e-24 | 39 |
electrically active cell | 9.73e-24 | 39 |
CNS neuron (sensu Vertebrata) | 2.68e-21 | 23 |
neuroblast (sensu Vertebrata) | 2.68e-21 | 23 |
autonomic neuron | 2.37e-11 | 9 |
embryonic cell | 7.35e-11 | 70 |
neuron of cerebral cortex | 3.30e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.