FFCP PHASE1:Mm9::chr4:129374061..129374087,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=230770|HGNC=|MCL_coexpression_id=1650|UniProt=Q810L4|association_with_transcript=0bp_to_ENSMUST00000102588,NM_199305,uc008uya.1,uc008uyb.1_5end|description=CAGE_peak_1_at_Tmem39b_5end|id=chr4:129374061..129374087,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!6.32e-07!26;UBERON:0000990!6.32e-07!26;UBERON:0003133!7.07e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0005156,6.32e-07,26;UBERON:0000990,6.32e-07,26;UBERON:0003133,7.07e-07,24|phase1_expression=7.68714466103011,1.39590163055744,2.72999543633722,3.62957053568196,3.50627010962443,5.54001597309236,7.47560449905682,8.13476937681931,16.8946466582,20.8317428426574,19.8612843141586,31.4302306441625,7.87523357683546,7.34331380319578,10.3264026162855,8.30148596298286,5.59649502502517,9.93705820878449,9.73512478600745,9.33657233955666,11.3958008802433,19.9574811913779,19.0675846071423,6.71968175732308,7.79991555628378,1.14846392823004,3.87685796543167,5.817723282519,6.84084310042946,5.54466285471848,7.31710685162506,17.14582818341,20.2971379902908,15.8481681015439,8.08784535303569,11.470190529736,6.73758875665818,3.34825304589526,2.3440060335714,2.61761871986899,4.70585190424811,2.04913645487534,2.42755176515577,3.77690453926732,3.64956952390252,2.38610777810186,12.5182615095686,7.84890562969608,6.59058548203415,4.6663175777828,5.73944328663986,5.75010257459886,11.4092172119261,8.70434570413613,8.06625117941913,5.91696702882678,6.30373567865265,7.73508138416164,17.601532094785,15.869729378161,14.5781222806421,7.79342423759004,4.4464739805557,13.498495759221,19.7773272513395,17.0515227587064,11.6844043102178,18.0582603501131,20.9453016863125,19.1708432431001,17.2466468308133,5.99867067247988,5.07997644188711,16.4137670948038,18.6898668485561,17.4651569455904,2.20231761998777,3.44755812830007,3.37934373163736,15.5625819521629,13.2657083223494,12.5019208933622,4.4669279840221,5.06486349028512,3.81995619442025,4.12480019663135,5.55249555116501,7.45597783301202,6.58817881998701,4.38315048619356,2.6087803983151,4.30211938490693,7.47968467078526,9.17495425784289,3.89865850468601,3.13618820968135,7.72444310724635,6.47635225796619,8.3131521472918,8.48014978824817,8.30976176682415,2.56652954828636,2.54805239706646,0,3.68034769719064,2.78695852022608,4.04419556011827,5.709193985953,20.1971549244794,5.93768556259299,13.0113995074602,7.30717147949139,6.22661842591358,8.28974523039424,8.58397562090645,4.64966387919799,10.8765785803125,5.49477556295664,8.84610551949874,6.47067399789637,5.07935492458905,9.21262980956922,7.45567044872489,2.04946557908083,2.72280718857492,4.85368404896324,8.14742846640258,8.39863823390771,9.40319680340679,5.24267237916879,2.74500361691176,16.0837570704466,4.69325664519146,3.58001640262463,6.02585329222724,5.19172041816825,8.7581852911272,5.349499736234,6.06534620240819,7.36546495602659,20.0385482162564,14.0240283704418,17.2859644613135,11.1521565198429,9.32100038373192,8.83984669965463,5.99691037182265,5.69147415625834,30.6106549964636,20.6125627382923,19.1786725338704,14.0285268753648,11.3999372182495,12.537077994798,8.84863186554157,13.733364410476,7.02213187313235,8.4924809347856,8.52490498186778,8.90640821902658,7.73935997937617,7.38254451990161,9.70653415899362,6.49321964766433,6.78775296704464,5.34828072925938,4.02410102099429,3.85325629811659,5.75959474697182,4.26835406605648,5.18840381093477,3.94739966048397,6.58650345873152,3.75777972529041,6.09840850835969,9.8788427884113,5.94753809370836,7.1401652999157,18.1295012954949,15.3276203427889,13.6599509001419,10.2858597557905,10.4517680607089,9.51128130562796,3.79623249235609,6.75265714368445,3.51869292320377,5.96869416123452,3.8992817423824,7.19055526923377,4.10662294761919,4.38110801159608,17.6391147886366,14.3953125888258,14.6520056375005,14.4592442770173,11.8311017172252,8.41629838683823,5.24863258131335,3.39503340353085,5.80895293013087,6.04646103216823,7.70776830426587,12.8470731401392,9.82794975566015,9.89393294493356,7.50582449137461,7.71766911207734,10.1850340712568,7.48009957372108,3.72911021582581,6.04035109013779,2.87536413054709,7.44281895337007,5.30464044294753,7.07220858251913,4.84373016509163,4.3419916922703,5.17308932466493,15.9172785887207,16.4594626206446,10.6939404038369,10.7957514212711,9.04533790185805,5.95109102215034,6.82967767502296,5.04432461139811,3.76489972402917,4.9430978283821,5.73521601505083,5.52591941970866,5.64131328467895,4.52373851817817,8.70249094109935,8.85175691434265,5.24279817978992,3.69266356971921,3.04750385139728,20.4918681720844,4.03953483526997,10.4117712407365,10.5418460960092,9.69405289797595,10.5146271099123,10.4715376818725,11.0399847007645,10.9298889452221,7.89090816360542,8.30104333687699,4.17717711348349,11.2132667314532,9.25941139069727,9.61033060186099,8.41347627159931,7.96470830039777,12.867373716214,9.06970670894253,3.96070667487386,7.38254732201932,4.91896236710284,4.13485269069154,3.2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| ||
|EntrezGene=230770 | |||
|HGNC= | |||
|MCL_coexpression_id=1650 | |||
|UniProt=Q810L4 | |||
|association_with_transcript=0bp_to_ENSMUST00000102588,NM_199305,uc008uya.1,uc008uyb.1_5end | |||
|description=CAGE_peak_1_at_Tmem39b_5end | |||
|id=chr4:129374061..129374087,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!6.32e-07!26;UBERON:0000990!6.32e-07!26;UBERON:0003133!7.07e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,6.32e-07,26;UBERON:0000990,6.32e-07,26;UBERON:0003133,7.07e-07,24 | |||
|phase1_expression=7.68714466103011,1.39590163055744,2.72999543633722,3.62957053568196,3.50627010962443,5.54001597309236,7.47560449905682,8.13476937681931,16.8946466582,20.8317428426574,19.8612843141586,31.4302306441625,7.87523357683546,7.34331380319578,10.3264026162855,8.30148596298286,5.59649502502517,9.93705820878449,9.73512478600745,9.33657233955666,11.3958008802433,19.9574811913779,19.0675846071423,6.71968175732308,7.79991555628378,1.14846392823004,3.87685796543167,5.817723282519,6.84084310042946,5.54466285471848,7.31710685162506,17.14582818341,20.2971379902908,15.8481681015439,8.08784535303569,11.470190529736,6.73758875665818,3.34825304589526,2.3440060335714,2.61761871986899,4.70585190424811,2.04913645487534,2.42755176515577,3.77690453926732,3.64956952390252,2.38610777810186,12.5182615095686,7.84890562969608,6.59058548203415,4.6663175777828,5.73944328663986,5.75010257459886,11.4092172119261,8.70434570413613,8.06625117941913,5.91696702882678,6.30373567865265,7.73508138416164,17.601532094785,15.869729378161,14.5781222806421,7.79342423759004,4.4464739805557,13.498495759221,19.7773272513395,17.0515227587064,11.6844043102178,18.0582603501131,20.9453016863125,19.1708432431001,17.2466468308133,5.99867067247988,5.07997644188711,16.4137670948038,18.6898668485561,17.4651569455904,2.20231761998777,3.44755812830007,3.37934373163736,15.5625819521629,13.2657083223494,12.5019208933622,4.4669279840221,5.06486349028512,3.81995619442025,4.12480019663135,5.55249555116501,7.45597783301202,6.58817881998701,4.38315048619356,2.6087803983151,4.30211938490693,7.47968467078526,9.17495425784289,3.89865850468601,3.13618820968135,7.72444310724635,6.47635225796619,8.3131521472918,8.48014978824817,8.30976176682415,2.56652954828636,2.54805239706646,0,3.68034769719064,2.78695852022608,4.04419556011827,5.709193985953,20.1971549244794,5.93768556259299,13.0113995074602,7.30717147949139,6.22661842591358,8.28974523039424,8.58397562090645,4.64966387919799,10.8765785803125,5.49477556295664,8.84610551949874,6.47067399789637,5.07935492458905,9.21262980956922,7.45567044872489,2.04946557908083,2.72280718857492,4.85368404896324,8.14742846640258,8.39863823390771,9.40319680340679,5.24267237916879,2.74500361691176,16.0837570704466,4.69325664519146,3.58001640262463,6.02585329222724,5.19172041816825,8.7581852911272,5.349499736234,6.06534620240819,7.36546495602659,20.0385482162564,14.0240283704418,17.2859644613135,11.1521565198429,9.32100038373192,8.83984669965463,5.99691037182265,5.69147415625834,30.6106549964636,20.6125627382923,19.1786725338704,14.0285268753648,11.3999372182495,12.537077994798,8.84863186554157,13.733364410476,7.02213187313235,8.4924809347856,8.52490498186778,8.90640821902658,7.73935997937617,7.38254451990161,9.70653415899362,6.49321964766433,6.78775296704464,5.34828072925938,4.02410102099429,3.85325629811659,5.75959474697182,4.26835406605648,5.18840381093477,3.94739966048397,6.58650345873152,3.75777972529041,6.09840850835969,9.8788427884113,5.94753809370836,7.1401652999157,18.1295012954949,15.3276203427889,13.6599509001419,10.2858597557905,10.4517680607089,9.51128130562796,3.79623249235609,6.75265714368445,3.51869292320377,5.96869416123452,3.8992817423824,7.19055526923377,4.10662294761919,4.38110801159608,17.6391147886366,14.3953125888258,14.6520056375005,14.4592442770173,11.8311017172252,8.41629838683823,5.24863258131335,3.39503340353085,5.80895293013087,6.04646103216823,7.70776830426587,12.8470731401392,9.82794975566015,9.89393294493356,7.50582449137461,7.71766911207734,10.1850340712568,7.48009957372108,3.72911021582581,6.04035109013779,2.87536413054709,7.44281895337007,5.30464044294753,7.07220858251913,4.84373016509163,4.3419916922703,5.17308932466493,15.9172785887207,16.4594626206446,10.6939404038369,10.7957514212711,9.04533790185805,5.95109102215034,6.82967767502296,5.04432461139811,3.76489972402917,4.9430978283821,5.73521601505083,5.52591941970866,5.64131328467895,4.52373851817817,8.70249094109935,8.85175691434265,5.24279817978992,3.69266356971921,3.04750385139728,20.4918681720844,4.03953483526997,10.4117712407365,10.5418460960092,9.69405289797595,10.5146271099123,10.4715376818725,11.0399847007645,10.9298889452221,7.89090816360542,8.30104333687699,4.17717711348349,11.2132667314532,9.25941139069727,9.61033060186099,8.41347627159931,7.96470830039777,12.867373716214,9.06970670894253,3.96070667487386,7.38254732201932,4.91896236710284,4.13485269069154,3.27180356529755,3.20847640546249,4.42451461110142,4.21674434299995,5.15677716240934,5.7874732978144,14.5849486165361,17.2047049431063,15.8609405923378,12.4138163549592,9.81028496811388,8.39200005070817,10.3518082698964,20.8857820176702,17.7938939525609,9.92377791247329,9.56340267060584,4.84393280087717,6.87567344180977,6.44610657616937,7.2221995887827,4.08073171281791,5.7481843623258,8.03093139749908,14.2406938894624,10.1856990053341,7.53473828018764,6.28793447516716,8.69357058184786,7.9889862097112,9.23679585336143,9.67399816630967,8.59203556213602,20.2455035891927,13.8257237646257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| |||
|short_description=p1@Tmem39b | |||
}} | |||
Revision as of 03:53, 14 September 2013
| Short description: | p1@Tmem39b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Tmem39b_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1650 |
| Association with transcript: | 0bp_to_ENSMUST00000102588, NM_199305, uc008uya.1, uc008uyb.1_5end |
| EntrezGene: | Tmem39b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| reproductive structure | 6.32e-07 | 26 |
| reproductive system | 6.32e-07 | 26 |
| reproductive organ | 7.07e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
