FFCP PHASE1:Mm9::chr4:134470890..134470924,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71817|HGNC=|MCL_coexpression_id=1159|UniProt=Q9CXL1|association_with_transcript=5bp_to_ENSMUST00000105863_5end|description=CAGE_peak_1_at_Tmem50a_5end|id=chr4:134470890..134470924,-|ontology_enrichment_celltype=CL:0000723!6.65e-09!91;CL:0000048!6.65e-09!91;CL:0000219!5.48e-08!54;CL:0000034!5.87e-08!97;CL:0000144!5.89e-07!121;CL:0000012!5.89e-07!121|ontology_enrichment_celltype_v019_2=CL:0000723,6.65e-09,91;CL:0000048,6.65e-09,91;CL:0000219,5.48e-08,54;CL:0000034,5.87e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!1.16e-08!32|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.16e-08,32|phase1_expression=49.6461426024861,20.9385244583617,32.7599452360466,16.9379958331825,20.0358291978539,22.6637017081051,29.2015800744407,104.977261958002,13.51571732656,11.7032263160997,17.635450727227,14.5983050961466,93.1331970825759,101.407666806037,32.6447566579349,42.1148556170838,59.4627596408925,69.0862142134541,60.0561219193136,68.7511235912809,38.94982688919,57.7873335989152,75.4867390611523,50.5576056027165,57.5817295478597,26.988902313406,37.9070556619986,43.5251890025496,57.1970492563685,48.3897849139067,56.0978191957921,7.62036808151557,16.6067492647834,0,31.1959749331377,26.4313086120003,31.2379115081425,215.543789829507,170.331105106188,215.691782517205,202.9398633707,198.083190637949,196.631692977617,59.2974012664969,56.8724584141477,50.1082633401391,71.1976123356716,44.2591067452306,70.0798922922965,84.9658658954618,63.8338082611653,50.3133975277401,51.5092600597251,84.142008473316,77.6376676019092,113.451411291853,100.859770858442,144.388185837684,30.7521020506589,51.8411159686592,42.466704034914,60.3143267083055,62.2506357277798,146.233704058227,190.851207975426,185.435310000932,50.6324186776104,57.2485274929116,28.2035745479059,30.9163598779572,26.7112700916255,51.4171771926846,51.462370041726,33.5624789848974,39.6800250015499,45.041720543891,51.7544640697127,56.437803433653,50.2293363747916,34.2904348098504,49.7692781197108,40.1103295328705,67.5622857583342,72.033614084055,73.6487554284225,42.1318877227345,45.5589378557129,34.6702969235059,54.8257639732253,66.2006866535441,58.2627622290372,76.5777250513434,36.0384806865108,60.9864606550733,24.0417274455638,36.2901778548842,51.8239910286164,63.0592193538814,68.0639332059516,56.1809923471441,54.0838731942453,44.9142670950112,22.9324715735981,14.2213340630666,57.1536348269605,56.2458901354719,47.0137733863748,43.3898742932428,55.9305828677891,80.0103129559405,47.7084648606874,89.2083851454574,80.2541930451084,111.986921930599,70.6708129885586,71.252957283926,63.0347167722653,55.2369543434063,67.2304019481904,32.029836289587,30.0344465106135,30.547140947519,59.6453635897991,31.6203260772471,30.7886659015779,39.8513006125403,71.8890747035522,84.5862850700705,85.3911925930995,32.8041500296562,53.5275705297793,36.0627990563921,53.5378906192212,45.7730668621292,52.5703752735687,36.828766716381,40.2265487208749,40.9298933307206,64.6970261590207,48.401626853889,27.3252930221678,32.1862946206862,31.8709969755468,36.9226803697502,26.9424536639258,31.7722026306427,29.5160432363146,31.5618112301599,28.0238390812695,29.5005485061798,33.6066647153142,36.1672958505498,34.4778589039741,40.3972513165713,41.1564272815887,37.2194078950582,77.2434506044558,79.7778512055617,83.2599053229086,33.5543751507513,36.8205914170321,45.9158256725588,35.0382208666111,35.2207974827853,40.2637164636057,34.4150238230604,34.6072687805509,36.0804907914554,27.3169350856378,47.6085645829376,31.3736292942462,37.7195967557357,34.2498179854039,42.5434347470378,44.1608891984667,30.3568606518889,38.6589976091044,26.4450566663544,27.0876078179747,30.190767341857,29.2529137201152,30.6558957427481,31.1329261382818,38.9962533530746,29.8953308773042,47.9273958246872,37.4489461112402,44.1683367931355,35.2884997685607,29.6610404855893,37.3918826283221,43.6119388427064,45.5202962287396,33.70331121987,25.9227792048085,35.63898237293,37.820734997687,28.8258219749209,37.3727934404361,40.445180546411,35.0107163086266,36.4021633569312,46.8395150797695,26.3615267031429,32.2356751985653,35.0784895320372,32.4576194221605,30.3883221288045,36.411496804743,38.5512824184086,36.480426024383,31.0254396902532,43.1304619582064,43.1683499295464,34.6361817157162,29.299149841865,34.803098223251,30.3939418458921,85.7254802373046,33.7294712951463,30.9633455239849,29.7053900106579,28.8669005394858,45.8967145390575,53.5598191993531,42.3440015851423,49.3398001052378,60.9027896534131,42.2555136942341,62.5957862214119,58.1948388888068,73.9156689351524,137.220068384738,151.74968578542,43.7670202986942,36.6995872585294,40.6192992669114,40.0863968145335,26.7213960963981,36.3558135174297,47.957249351271,43.7291393612235,45.2389135238878,50.661385165941,56.8136618910105,45.8583979877909,63.1504694612835,56.4053805768832,64.0366200273368,35.9879874392424,42.1562053068558,55.9125995515181,42.0248355132226,42.7272618498867,41.1509928853885,36.1743147870922,2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| ||
|EntrezGene=71817 | |||
|HGNC= | |||
|MCL_coexpression_id=1159 | |||
|UniProt=Q9CXL1 | |||
|association_with_transcript=5bp_to_ENSMUST00000105863_5end | |||
|description=CAGE_peak_1_at_Tmem50a_5end | |||
|id=chr4:134470890..134470924,- | |||
|ontology_enrichment_celltype=CL:0000723!6.65e-09!91;CL:0000048!6.65e-09!91;CL:0000219!5.48e-08!54;CL:0000034!5.87e-08!97;CL:0000144!5.89e-07!121;CL:0000012!5.89e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,6.65e-09,91;CL:0000048,6.65e-09,91;CL:0000219,5.48e-08,54;CL:0000034,5.87e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.16e-08!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.16e-08,32 | |||
|phase1_expression=49.6461426024861,20.9385244583617,32.7599452360466,16.9379958331825,20.0358291978539,22.6637017081051,29.2015800744407,104.977261958002,13.51571732656,11.7032263160997,17.635450727227,14.5983050961466,93.1331970825759,101.407666806037,32.6447566579349,42.1148556170838,59.4627596408925,69.0862142134541,60.0561219193136,68.7511235912809,38.94982688919,57.7873335989152,75.4867390611523,50.5576056027165,57.5817295478597,26.988902313406,37.9070556619986,43.5251890025496,57.1970492563685,48.3897849139067,56.0978191957921,7.62036808151557,16.6067492647834,0,31.1959749331377,26.4313086120003,31.2379115081425,215.543789829507,170.331105106188,215.691782517205,202.9398633707,198.083190637949,196.631692977617,59.2974012664969,56.8724584141477,50.1082633401391,71.1976123356716,44.2591067452306,70.0798922922965,84.9658658954618,63.8338082611653,50.3133975277401,51.5092600597251,84.142008473316,77.6376676019092,113.451411291853,100.859770858442,144.388185837684,30.7521020506589,51.8411159686592,42.466704034914,60.3143267083055,62.2506357277798,146.233704058227,190.851207975426,185.435310000932,50.6324186776104,57.2485274929116,28.2035745479059,30.9163598779572,26.7112700916255,51.4171771926846,51.462370041726,33.5624789848974,39.6800250015499,45.041720543891,51.7544640697127,56.437803433653,50.2293363747916,34.2904348098504,49.7692781197108,40.1103295328705,67.5622857583342,72.033614084055,73.6487554284225,42.1318877227345,45.5589378557129,34.6702969235059,54.8257639732253,66.2006866535441,58.2627622290372,76.5777250513434,36.0384806865108,60.9864606550733,24.0417274455638,36.2901778548842,51.8239910286164,63.0592193538814,68.0639332059516,56.1809923471441,54.0838731942453,44.9142670950112,22.9324715735981,14.2213340630666,57.1536348269605,56.2458901354719,47.0137733863748,43.3898742932428,55.9305828677891,80.0103129559405,47.7084648606874,89.2083851454574,80.2541930451084,111.986921930599,70.6708129885586,71.252957283926,63.0347167722653,55.2369543434063,67.2304019481904,32.029836289587,30.0344465106135,30.547140947519,59.6453635897991,31.6203260772471,30.7886659015779,39.8513006125403,71.8890747035522,84.5862850700705,85.3911925930995,32.8041500296562,53.5275705297793,36.0627990563921,53.5378906192212,45.7730668621292,52.5703752735687,36.828766716381,40.2265487208749,40.9298933307206,64.6970261590207,48.401626853889,27.3252930221678,32.1862946206862,31.8709969755468,36.9226803697502,26.9424536639258,31.7722026306427,29.5160432363146,31.5618112301599,28.0238390812695,29.5005485061798,33.6066647153142,36.1672958505498,34.4778589039741,40.3972513165713,41.1564272815887,37.2194078950582,77.2434506044558,79.7778512055617,83.2599053229086,33.5543751507513,36.8205914170321,45.9158256725588,35.0382208666111,35.2207974827853,40.2637164636057,34.4150238230604,34.6072687805509,36.0804907914554,27.3169350856378,47.6085645829376,31.3736292942462,37.7195967557357,34.2498179854039,42.5434347470378,44.1608891984667,30.3568606518889,38.6589976091044,26.4450566663544,27.0876078179747,30.190767341857,29.2529137201152,30.6558957427481,31.1329261382818,38.9962533530746,29.8953308773042,47.9273958246872,37.4489461112402,44.1683367931355,35.2884997685607,29.6610404855893,37.3918826283221,43.6119388427064,45.5202962287396,33.70331121987,25.9227792048085,35.63898237293,37.820734997687,28.8258219749209,37.3727934404361,40.445180546411,35.0107163086266,36.4021633569312,46.8395150797695,26.3615267031429,32.2356751985653,35.0784895320372,32.4576194221605,30.3883221288045,36.411496804743,38.5512824184086,36.480426024383,31.0254396902532,43.1304619582064,43.1683499295464,34.6361817157162,29.299149841865,34.803098223251,30.3939418458921,85.7254802373046,33.7294712951463,30.9633455239849,29.7053900106579,28.8669005394858,45.8967145390575,53.5598191993531,42.3440015851423,49.3398001052378,60.9027896534131,42.2555136942341,62.5957862214119,58.1948388888068,73.9156689351524,137.220068384738,151.74968578542,43.7670202986942,36.6995872585294,40.6192992669114,40.0863968145335,26.7213960963981,36.3558135174297,47.957249351271,43.7291393612235,45.2389135238878,50.661385165941,56.8136618910105,45.8583979877909,63.1504694612835,56.4053805768832,64.0366200273368,35.9879874392424,42.1562053068558,55.9125995515181,42.0248355132226,42.7272618498867,41.1509928853885,36.1743147870922,29.3253850255809,33.9489143560617,47.5436047538044,46.730142487477,39.2811005615696,40.3522439720031,39.2147116223193,33.1838595832607,32.6797686582496,48.4737053266478,70.8114379967879,35.2919744301368,47.9920716834019,37.9376552005918,47.1725021488448,50.3000065637839,55.782117984119,60.2840599246907,53.7398211465897,37.4942765428962,41.4593388343328,34.7909993706523,40.5275711006723,27.5026937672391,36.6473096089629,24.9494167612493,31.4799303560239,40.4227158382911,48.1855883849945,40.8645998567181,49.0765497529736,35.2249014598772,28.8424820491363,37.0620640594567,55.7529250379845,62.2783962840278,54.450789678943,48.6882015187708,36.3786392618306,30.7012395361542,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| |||
|short_description=p1@Tmem50a | |||
}} | |||
Revision as of 04:05, 14 September 2013
| Short description: | p1@Tmem50a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Tmem50a_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1159 |
| Association with transcript: | 5bp_to_ENSMUST00000105863_5end |
| EntrezGene: | Tmem50a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| somatic stem cell | 6.65e-09 | 91 |
| multi fate stem cell | 6.65e-09 | 91 |
| motile cell | 5.48e-08 | 54 |
| stem cell | 5.87e-08 | 97 |
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system | 1.16e-08 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
