FFCP PHASE1:Hg19::chr8:145087600..145087607,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C681|description=CAGE_peak_at_chr8:145087600..145087607,-|id=chr8:145087600..145087607,-|ontology_enrichment_celltype=CL:0002057!3.07e-40!42;CL:0000860!2.52e-37!45;CL:0000763!4.83e-33!112;CL:0000049!4.83e-33!112;CL:0000766!5.69e-32!76;CL:0002009!9.85e-31!65;CL:0002194!1.96e-28!63;CL:0000576!1.96e-28!63;CL:0000040!1.96e-28!63;CL:0000559!1.96e-28!63;CL:0000557!7.58e-28!71;CL:0000738!1.22e-27!140;CL:0000988!8.65e-26!182;CL:0000839!2.89e-25!70;CL:0000037!1.58e-23!172;CL:0000566!1.58e-23!172;CL:0000453!6.63e-21!5;CL:0002032!6.68e-21!165;CL:0000837!6.68e-21!165;CL:0002087!6.16e-17!119;CL:0000080!2.65e-16!6;CL:0002031!2.22e-14!124;CL:0000990!1.09e-11!8;CL:0000451!1.39e-09!10;CL:0000134!1.72e-09!358;CL:0002320!3.33e-09!365;CL:0000767!4.93e-09!3;CL:0000842!6.56e-09!3;CL:0000219!3.43e-08!390;CL:0000094!1.57e-07!8;CL:0000048!5.63e-07!430;CL:0002393!6.06e-07!9;CL:0002397!6.06e-07!9;CL:0000224!6.86e-07!4;CL:0000723!8.38e-07!436|ontology_enrichment_celltype_v019=CL:0000860;1.61e-18;33!CL:0002057;1.61e-18;33!CL:0000453;5.67e-17;5!CL:0000473;2.09e-13;39!CL:0000234;2.09e-13;39!CL:0000576;9.71e-12;48!CL:0000771;3.18e-11;2!CL:0000990;7.24e-10;8!CL:0000451;3.08e-08;10!CL:0000766;1.45e-07;69|ontology_enrichment_celltype_v019_2=CL:0000860,7.41e-23,42;CL:0002057,7.41e-23,42;CL:0000473,5.50e-20,48;CL:0000234,5.50e-20,48;CL:0000763,9.38e-18,108;CL:0000049,9.38e-18,108;CL:0000453,5.03e-17,5;CL:0000766,5.35e-17,72;CL:0002194,5.84e-16,59;CL:0000576,5.84e-16,59;CL:0000040,5.84e-16,59;CL:0000559,5.84e-16,59;CL:0002009,1.94e-15,61;CL:0000839,2.84e-14,66;CL:0000557,4.64e-14,67;CL:0000738,4.83e-14,136;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0000771,4.09e-11,2;CL:0000988,1.07e-10,177;CL:0000990,6.78e-10,8;CL:0000451,2.92e-08,10;CL:0002087,3.94e-08,115;CL:0002031,8.82e-08,120|ontology_enrichment_development_v019=CL:0002057;3.04e-16;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.14e-27!102;UBERON:0003061!1.14e-27!102;UBERON:0002193!8.12e-25!112;UBERON:0002371!2.56e-24!80;UBERON:0001474!2.27e-22!86;UBERON:0004765!1.66e-18!101;UBERON:0001434!1.66e-18!101;UBERON:0002405!8.44e-16!115;UBERON:0003081!1.03e-10!216;UBERON:0002204!1.05e-09!167;UBERON:0002384!8.21e-09!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.16e-12,76;UBERON:0001474,1.77e-11,82;UBERON:0004765,1.90e-10,90;UBERON:0002405,4.19e-10,93;UBERON:0002390,1.40e-09,98;UBERON:0003061,1.40e-09,98;UBERON:0001434,2.20e-09,100;UBERON:0002193,1.13e-08,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,2.21598163412751,0.601633342410425,0.434021741431704,0,0,0,0,0.377875943688809,0,0,0.822335776043652,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0.545812300115692,0,0,0.641858054152187,1.27867425159808,0,0.398927315243264,0,1.45104619314292,1.70215567407342,1.86846674698672,0,0,0.217188844705117,0,1.47311054395026,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0.313265848516366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7537427795545,0.797189041880179,5.5612234046987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C681 | |||
|description=CAGE_peak_at_chr8:145087600..145087607,- | |||
|id=chr8:145087600..145087607,- | |||
|ontology_enrichment_celltype=CL:0002057!3.07e-40!42;CL:0000860!2.52e-37!45;CL:0000763!4.83e-33!112;CL:0000049!4.83e-33!112;CL:0000766!5.69e-32!76;CL:0002009!9.85e-31!65;CL:0002194!1.96e-28!63;CL:0000576!1.96e-28!63;CL:0000040!1.96e-28!63;CL:0000559!1.96e-28!63;CL:0000557!7.58e-28!71;CL:0000738!1.22e-27!140;CL:0000988!8.65e-26!182;CL:0000839!2.89e-25!70;CL:0000037!1.58e-23!172;CL:0000566!1.58e-23!172;CL:0000453!6.63e-21!5;CL:0002032!6.68e-21!165;CL:0000837!6.68e-21!165;CL:0002087!6.16e-17!119;CL:0000080!2.65e-16!6;CL:0002031!2.22e-14!124;CL:0000990!1.09e-11!8;CL:0000451!1.39e-09!10;CL:0000134!1.72e-09!358;CL:0002320!3.33e-09!365;CL:0000767!4.93e-09!3;CL:0000842!6.56e-09!3;CL:0000219!3.43e-08!390;CL:0000094!1.57e-07!8;CL:0000048!5.63e-07!430;CL:0002393!6.06e-07!9;CL:0002397!6.06e-07!9;CL:0000224!6.86e-07!4;CL:0000723!8.38e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.61e-18;33!CL:0002057;1.61e-18;33!CL:0000453;5.67e-17;5!CL:0000473;2.09e-13;39!CL:0000234;2.09e-13;39!CL:0000576;9.71e-12;48!CL:0000771;3.18e-11;2!CL:0000990;7.24e-10;8!CL:0000451;3.08e-08;10!CL:0000766;1.45e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.41e-23,42;CL:0002057,7.41e-23,42;CL:0000473,5.50e-20,48;CL:0000234,5.50e-20,48;CL:0000763,9.38e-18,108;CL:0000049,9.38e-18,108;CL:0000453,5.03e-17,5;CL:0000766,5.35e-17,72;CL:0002194,5.84e-16,59;CL:0000576,5.84e-16,59;CL:0000040,5.84e-16,59;CL:0000559,5.84e-16,59;CL:0002009,1.94e-15,61;CL:0000839,2.84e-14,66;CL:0000557,4.64e-14,67;CL:0000738,4.83e-14,136;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0000771,4.09e-11,2;CL:0000988,1.07e-10,177;CL:0000990,6.78e-10,8;CL:0000451,2.92e-08,10;CL:0002087,3.94e-08,115;CL:0002031,8.82e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.04e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.14e-27!102;UBERON:0003061!1.14e-27!102;UBERON:0002193!8.12e-25!112;UBERON:0002371!2.56e-24!80;UBERON:0001474!2.27e-22!86;UBERON:0004765!1.66e-18!101;UBERON:0001434!1.66e-18!101;UBERON:0002405!8.44e-16!115;UBERON:0003081!1.03e-10!216;UBERON:0002204!1.05e-09!167;UBERON:0002384!8.21e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.16e-12,76;UBERON:0001474,1.77e-11,82;UBERON:0004765,1.90e-10,90;UBERON:0002405,4.19e-10,93;UBERON:0002390,1.40e-09,98;UBERON:0003061,1.40e-09,98;UBERON:0001434,2.20e-09,100;UBERON:0002193,1.13e-08,108 | |||
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|short_description=p@chr8:145087600..145087607,- | |||
}} |
Revision as of 04:12, 14 September 2013
Short description: | p@chr8:145087600..145087607, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:145087600..145087607, - |
Coexpression cluster: | C681_immature_CD14_migratory_CD34_Eosinophils_Basophils_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.41e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.41e-23 | 42 |
defensive cell | 5.50e-20 | 48 |
phagocyte | 5.50e-20 | 48 |
myeloid cell | 9.38e-18 | 108 |
common myeloid progenitor | 9.38e-18 | 108 |
Langerhans cell | 5.03e-17 | 5 |
myeloid leukocyte | 5.35e-17 | 72 |
monopoietic cell | 5.84e-16 | 59 |
monocyte | 5.84e-16 | 59 |
monoblast | 5.84e-16 | 59 |
promonocyte | 5.84e-16 | 59 |
macrophage dendritic cell progenitor | 1.94e-15 | 61 |
myeloid lineage restricted progenitor cell | 2.84e-14 | 66 |
granulocyte monocyte progenitor cell | 4.64e-14 | 67 |
leukocyte | 4.83e-14 | 136 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
hematopoietic stem cell | 2.70e-11 | 168 |
eosinophil | 4.09e-11 | 2 |
hematopoietic cell | 1.07e-10 | 177 |
conventional dendritic cell | 6.78e-10 | 8 |
dendritic cell | 2.92e-08 | 10 |
nongranular leukocyte | 3.94e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 8.82e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.16e-12 | 76 |
bone element | 1.77e-11 | 82 |
skeletal element | 1.90e-10 | 90 |
immune system | 4.19e-10 | 93 |
hematopoietic system | 1.40e-09 | 98 |
blood island | 1.40e-09 | 98 |
skeletal system | 2.20e-09 | 100 |
hemolymphoid system | 1.13e-08 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.