FFCP PHASE1:Hg19::chr8:24182486..24182532,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10863|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=206|TSSclassifier=N|UniProt=|association_with_transcript=-17bp_to_ENST00000521110_5end|coexpression_cluster_id=C47|description=CAGE_peak_6_at_ADAM28_5end|id=chr8:24182486..24182532,+|ontology_enrichment_celltype=CL:0000236!5.05e-40!14;CL:0000945!3.07e-25!24;CL:0000826!3.07e-25!24;CL:0000738!3.37e-14!140;CL:0002087!5.05e-13!119;CL:0000838!8.36e-13!52;CL:0000542!1.73e-12!53;CL:0000051!1.73e-12!53;CL:0000842!1.14e-10!3;CL:0000037!3.64e-10!172;CL:0000566!3.64e-10!172;CL:0000988!3.30e-09!182;CL:0002031!4.87e-09!124;CL:0002032!3.15e-08!165;CL:0000837!3.15e-08!165;CL:0000224!4.28e-08!4;CL:0000785!1.33e-07!2;CL:0000955!1.33e-07!2;CL:0000818!1.33e-07!2;CL:0000954!1.33e-07!2;CL:0000816!1.33e-07!2|ontology_enrichment_celltype_v019=CL:0000236;5.58e-72;13!CL:0000945;3.01e-45;24!CL:0000542;7.85e-15;53!CL:0000226;5.15e-11;3!CL:0000842;5.15e-11;3!CL:0000946;8.82e-09;1!CL:0000786;8.82e-09;1|ontology_enrichment_celltype_v019_2=CL:0000236,4.33e-79,14;CL:0000945,2.63e-45,24;CL:0000826,2.63e-45,24;CL:0000838,8.74e-20,52;CL:0000542,2.27e-19,53;CL:0000051,2.27e-19,53;CL:0000226,6.01e-11,3;CL:0000842,6.01e-11,3;CL:0002087,1.11e-10,115;CL:0000946,6.72e-09,1;CL:0000786,6.72e-09,1;CL:0000980,6.72e-09,1;CL:0000738,1.19e-08,136;CL:0002031,2.75e-07,120|ontology_enrichment_development_v019=CL:0000051;7.85e-15;53!UBERON:0001045;4.19e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!1.47e-20!15;UBERON:0000179!1.47e-20!15;UBERON:0000463!1.47e-20!15;UBERON:0007023!6.29e-11!115;UBERON:0002193!3.01e-09!112;UBERON:0002390!1.87e-08!102;UBERON:0003061!1.87e-08!102|ontology_enrichment_uberon_v019=UBERON:0000178;5.16e-31;15!UBERON:0000179;5.16e-31;15!UBERON:0000463;5.16e-31;15!UBERON:0002390;5.75e-17;32!UBERON:0002193;1.43e-15;42!UBERON:0002372;4.19e-09;1!UBERON:0001154;4.19e-09;1!UBERON:0001153;4.19e-09;1!UBERON:0009854;4.19e-09;1!UBERON:0001961;4.19e-09;1!UBERON:0001744;4.19e-09;1!UBERON:0001042;4.19e-09;1!UBERON:0001735;4.19e-09;1!UBERON:0000029;5.53e-09;1|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.19e-31,15;UBERON:0000179,6.19e-31,15;UBERON:0000463,6.19e-31,15;UBERON:0001154,4.19e-09,1;UBERON:0001153,4.19e-09,1;UBERON:0001045,4.19e-09,1;UBERON:0002372,4.54e-09,1;UBERON:0001961,4.54e-09,1;UBERON:0001744,4.54e-09,1;UBERON:0001735,4.54e-09,1;UBERON:0000029,5.31e-09,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,28.1593991138116,30.0376236194172,23.1272406004524,31.5780364699215,23.2229672480887,35.634651277178,27.1028397841793,28.6216126360609,29.5990743936913,14.6809297342735,17.5845684937605,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,1.2942852049117,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,0,1.13929437434833,1.90585420366231,2.87953591160336,1.29694662238543,3.7802200606668,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03912307084262,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.678923115418936,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,2.48083010905975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,1.95897778844825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=206 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-17bp_to_ENST00000521110_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_6_at_ADAM28_5end | |||
|id=chr8:24182486..24182532,+ | |||
|ontology_enrichment_celltype=CL:0000236!5.05e-40!14;CL:0000945!3.07e-25!24;CL:0000826!3.07e-25!24;CL:0000738!3.37e-14!140;CL:0002087!5.05e-13!119;CL:0000838!8.36e-13!52;CL:0000542!1.73e-12!53;CL:0000051!1.73e-12!53;CL:0000842!1.14e-10!3;CL:0000037!3.64e-10!172;CL:0000566!3.64e-10!172;CL:0000988!3.30e-09!182;CL:0002031!4.87e-09!124;CL:0002032!3.15e-08!165;CL:0000837!3.15e-08!165;CL:0000224!4.28e-08!4;CL:0000785!1.33e-07!2;CL:0000955!1.33e-07!2;CL:0000818!1.33e-07!2;CL:0000954!1.33e-07!2;CL:0000816!1.33e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.58e-72;13!CL:0000945;3.01e-45;24!CL:0000542;7.85e-15;53!CL:0000226;5.15e-11;3!CL:0000842;5.15e-11;3!CL:0000946;8.82e-09;1!CL:0000786;8.82e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.33e-79,14;CL:0000945,2.63e-45,24;CL:0000826,2.63e-45,24;CL:0000838,8.74e-20,52;CL:0000542,2.27e-19,53;CL:0000051,2.27e-19,53;CL:0000226,6.01e-11,3;CL:0000842,6.01e-11,3;CL:0002087,1.11e-10,115;CL:0000946,6.72e-09,1;CL:0000786,6.72e-09,1;CL:0000980,6.72e-09,1;CL:0000738,1.19e-08,136;CL:0002031,2.75e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;7.85e-15;53!UBERON:0001045;4.19e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.47e-20!15;UBERON:0000179!1.47e-20!15;UBERON:0000463!1.47e-20!15;UBERON:0007023!6.29e-11!115;UBERON:0002193!3.01e-09!112;UBERON:0002390!1.87e-08!102;UBERON:0003061!1.87e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.16e-31;15!UBERON:0000179;5.16e-31;15!UBERON:0000463;5.16e-31;15!UBERON:0002390;5.75e-17;32!UBERON:0002193;1.43e-15;42!UBERON:0002372;4.19e-09;1!UBERON:0001154;4.19e-09;1!UBERON:0001153;4.19e-09;1!UBERON:0009854;4.19e-09;1!UBERON:0001961;4.19e-09;1!UBERON:0001744;4.19e-09;1!UBERON:0001042;4.19e-09;1!UBERON:0001735;4.19e-09;1!UBERON:0000029;5.53e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.19e-31,15;UBERON:0000179,6.19e-31,15;UBERON:0000463,6.19e-31,15;UBERON:0001154,4.19e-09,1;UBERON:0001153,4.19e-09,1;UBERON:0001045,4.19e-09,1;UBERON:0002372,4.54e-09,1;UBERON:0001961,4.54e-09,1;UBERON:0001744,4.54e-09,1;UBERON:0001735,4.54e-09,1;UBERON:0000029,5.31e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,28.1593991138116,30.0376236194172,23.1272406004524,31.5780364699215,23.2229672480887,35.634651277178,27.1028397841793,28.6216126360609,29.5990743936913,14.6809297342735,17.5845684937605,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,1.2942852049117,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,0,1.13929437434833,1.90585420366231,2.87953591160336,1.29694662238543,3.7802200606668,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03912307084262,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.678923115418936,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,2.48083010905975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,1.95897778844825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,1.69171052363736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,3.03084238565644,0.286888821570705,0,0,0,0,0,0,0,0,0,1.61019034872821,0 | |||
|short_description=p6@ADAM28 | |||
}} |
Revision as of 04:45, 14 September 2013
Short description: | p6@ADAM28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ADAM28_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -17bp_to_ENST00000521110_5end |
EntrezGene: | ADAM28 |
HGNC: | 206 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.33e-79 | 14 |
lymphocyte of B lineage | 2.63e-45 | 24 |
pro-B cell | 2.63e-45 | 24 |
lymphoid lineage restricted progenitor cell | 8.74e-20 | 52 |
lymphocyte | 2.27e-19 | 53 |
common lymphoid progenitor | 2.27e-19 | 53 |
single nucleate cell | 6.01e-11 | 3 |
mononuclear cell | 6.01e-11 | 3 |
nongranular leukocyte | 1.11e-10 | 115 |
antibody secreting cell | 6.72e-09 | 1 |
plasma cell | 6.72e-09 | 1 |
plasmablast | 6.72e-09 | 1 |
leukocyte | 1.19e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 2.75e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 6.19e-31 | 15 |
haemolymphatic fluid | 6.19e-31 | 15 |
organism substance | 6.19e-31 | 15 |
vermiform appendix | 4.19e-09 | 1 |
caecum | 4.19e-09 | 1 |
midgut | 4.19e-09 | 1 |
tonsil | 4.54e-09 | 1 |
mucosa-associated lymphoid tissue | 4.54e-09 | 1 |
lymphoid tissue | 4.54e-09 | 1 |
tonsillar ring | 4.54e-09 | 1 |
lymph node | 5.31e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.