FFCP PHASE1:Mm9::chr4:3867894..3867898,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66433|HGNC=|UniProt=Q8K2Q5|association_with_transcript=-102bp_to_ENSMUST00000119403_5end|description=CAGE_peak_2_at_Chchd7_5end|id=chr4:3867894..3867898,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.08e-07!59;UBERON:0001007!9.60e-07!128;UBERON:0001555!9.60e-07!128;UBERON:0007026!9.60e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.64e-07,47|phase1_expression=1.28119077683835,0,0.454999239389536,1.51232105653415,1.50268718983904,0.16787927191189,0.467225281191051,1.93684985162364,3.09735188733667,2.10658073689794,1.02730780935303,0.638177271962691,1.36960583944965,2.27293046289393,0.333109761815663,1.21485160433896,0,2.20823515750766,1.23402990245165,0.84877930359606,1.19060606211498,1.09220046320974,0.522399578277871,0.95995453676044,1.37645568640302,0.57423196411502,0.86152399231815,0.430942465371778,5.32065574477847,1.51218077855958,1.10865255327652,0,0,0,1.44425809875637,1.49611180822643,2.24586291888606,0,0,0.523523743973798,0,0,0.485510353031154,0.755380907853464,1.82478476195126,0.917733760808408,0,0,0,0.58328969722285,0.55994568650145,0,1.34226084846189,0.725362142011344,2.35265659399725,0.257259436035947,0.286533439938757,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.311068836925433,0.270011876663381,0,0,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.614426133024974,0.131886287730194,0.182975287204819,0,0.837548997004143,1.12552522006336,0.916789486660861,0.294628585473668,0.854230084794618,1.4911955666024,0.37863096666592,0.226714680320357,1.73918693221007,0,0,0,0.649776417447669,0,0.140444420131752,0.170430322578058,0.519572009205738,0.35333957451034,2.25349471642689,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,1.7127581957859,1.03575153458869,0.890652834388949,0.346970653532272,0.304465478312141,0.691846491768175,1.20578112442098,2.3517741427141,0.879666139307728,1.23597483867187,1.01219549843938,0,0.323533699894818,1.10420759230197,0,0,2.04946557908083,1.67557365450764,1.78819938646014,1.1981512450592,0.599902730993408,1.65191295194984,1.04853447583376,0.457500602818626,0.376963056338593,1.04294592115366,0.255715457330331,0.41557608911912,0.324482526135515,1.12023300235348,2.11491850037158,6.06534620240819,1.68353484709179,1.04096354370163,1.60931473103431,0.360124259610698,1.65775299619287,1.56483948048054,1.7935920839879,1.03071897015702,3.10444044886819,0,1.32374256117473,1.93546236580344,0.657587197282725,3.33656699070717,1.0447564995665,1.4404749548556,2.38841120182192,0.702213187313235,0.257347907114715,1.70498099637356,0.414251545071004,0.469052119962192,1.2604344302271,1.42046841351126,1.18058539048442,1.3884040159864,1.16266972375204,2.14618721119695,1.75148013550754,1.31647879930784,1.80584210487005,1.86458261955468,2.19299981137998,1.3173006917463,2.41571553768669,1.26173969138476,0.617427674275707,3.63460661282178,1.58670339998127,1.49301775374664,0.696710015581316,0.644337306610467,1.61346819698674,1.33426826306922,0.570676878337677,2.37264530772256,1.15289268306808,2.01068167040216,1.39269530428806,2.14460495831032,5.39291645192533,3.45820879799511,5.17767310461355,0.758671603812327,1.02823661348756,0,0.407302655690628,1.74557238450863,1.33258057791605,1.3279672796094,2.21415221969403,2.98297582898612,0.740382983530803,1.48226313543574,0.667380422864376,0.982794975566015,1.34917267430912,0.811440485554012,1.68824011826692,1.78238096246994,0.863088412352432,1.94562272130042,3.0201755450689,5.75072826109418,0.372140947668503,0.312037673114561,1.26289438973556,0.896987067609561,2.41221760681684,0.923765950833023,1.13694847062291,0.814824882210129,0.509235257325564,1.17345124144251,0.167506257441816,1.6663054862021,1.36593553500459,0.788175720530955,0.221464689648775,0.159454768657487,1.80249646187312,1.72684981865896,1.44649058581512,0,0.54390568381871,0.491764273019036,0.275936746304732,0.642202359951168,0.937693492737625,0,0.504941854408746,0.631016438832513,0.390438744296638,0.646270193198397,0,0.222798674082394,0.283076530788832,0.809621403349789,1.46127928955656,0.790575555893047,1.92792789853084,0.709700426041343,1.06839362200353,1.14020871547503,1.64970122972535,1.32745138339963,0.728341908464944,1.51161778482376,1.88605079755898,0,0.614870295887855,1.55056975900933,2.90826983582004,0.356497378384721,2.52829406348653,1.05418608574999,2.06271086496374,3.06395645178409,1.08036656418786,1.03486947026204,2.14337035031592,0.709360934569094,0.891844088010353,1.31639216481697,0.608929898229199,0.469343416127421,1.0591603543191,1.98475558249466,1.48397627647332,2.74489525383039,2.17126529741361,1.67121281604391,2.46211349617592,2.91480836629851,0.556275906031529,1.36696704638282,1.23832120777933,1.48155621895769,2.26042148405629,1.77702496037333,0.915112692826091,1.69978429993855,1.81936888020755,1.38199973804424,5.72802370809068,0.949007980743406,1.62655573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| ||
|EntrezGene=66433 | |||
|HGNC= | |||
|UniProt=Q8K2Q5 | |||
|association_with_transcript=-102bp_to_ENSMUST00000119403_5end | |||
|description=CAGE_peak_2_at_Chchd7_5end | |||
|id=chr4:3867894..3867898,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.08e-07!59;UBERON:0001007!9.60e-07!128;UBERON:0001555!9.60e-07!128;UBERON:0007026!9.60e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.64e-07,47 | |||
|phase1_expression=1.28119077683835,0,0.454999239389536,1.51232105653415,1.50268718983904,0.16787927191189,0.467225281191051,1.93684985162364,3.09735188733667,2.10658073689794,1.02730780935303,0.638177271962691,1.36960583944965,2.27293046289393,0.333109761815663,1.21485160433896,0,2.20823515750766,1.23402990245165,0.84877930359606,1.19060606211498,1.09220046320974,0.522399578277871,0.95995453676044,1.37645568640302,0.57423196411502,0.86152399231815,0.430942465371778,5.32065574477847,1.51218077855958,1.10865255327652,0,0,0,1.44425809875637,1.49611180822643,2.24586291888606,0,0,0.523523743973798,0,0,0.485510353031154,0.755380907853464,1.82478476195126,0.917733760808408,0,0,0,0.58328969722285,0.55994568650145,0,1.34226084846189,0.725362142011344,2.35265659399725,0.257259436035947,0.286533439938757,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.311068836925433,0.270011876663381,0,0,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.614426133024974,0.131886287730194,0.182975287204819,0,0.837548997004143,1.12552522006336,0.916789486660861,0.294628585473668,0.854230084794618,1.4911955666024,0.37863096666592,0.226714680320357,1.73918693221007,0,0,0,0.649776417447669,0,0.140444420131752,0.170430322578058,0.519572009205738,0.35333957451034,2.25349471642689,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,1.7127581957859,1.03575153458869,0.890652834388949,0.346970653532272,0.304465478312141,0.691846491768175,1.20578112442098,2.3517741427141,0.879666139307728,1.23597483867187,1.01219549843938,0,0.323533699894818,1.10420759230197,0,0,2.04946557908083,1.67557365450764,1.78819938646014,1.1981512450592,0.599902730993408,1.65191295194984,1.04853447583376,0.457500602818626,0.376963056338593,1.04294592115366,0.255715457330331,0.41557608911912,0.324482526135515,1.12023300235348,2.11491850037158,6.06534620240819,1.68353484709179,1.04096354370163,1.60931473103431,0.360124259610698,1.65775299619287,1.56483948048054,1.7935920839879,1.03071897015702,3.10444044886819,0,1.32374256117473,1.93546236580344,0.657587197282725,3.33656699070717,1.0447564995665,1.4404749548556,2.38841120182192,0.702213187313235,0.257347907114715,1.70498099637356,0.414251545071004,0.469052119962192,1.2604344302271,1.42046841351126,1.18058539048442,1.3884040159864,1.16266972375204,2.14618721119695,1.75148013550754,1.31647879930784,1.80584210487005,1.86458261955468,2.19299981137998,1.3173006917463,2.41571553768669,1.26173969138476,0.617427674275707,3.63460661282178,1.58670339998127,1.49301775374664,0.696710015581316,0.644337306610467,1.61346819698674,1.33426826306922,0.570676878337677,2.37264530772256,1.15289268306808,2.01068167040216,1.39269530428806,2.14460495831032,5.39291645192533,3.45820879799511,5.17767310461355,0.758671603812327,1.02823661348756,0,0.407302655690628,1.74557238450863,1.33258057791605,1.3279672796094,2.21415221969403,2.98297582898612,0.740382983530803,1.48226313543574,0.667380422864376,0.982794975566015,1.34917267430912,0.811440485554012,1.68824011826692,1.78238096246994,0.863088412352432,1.94562272130042,3.0201755450689,5.75072826109418,0.372140947668503,0.312037673114561,1.26289438973556,0.896987067609561,2.41221760681684,0.923765950833023,1.13694847062291,0.814824882210129,0.509235257325564,1.17345124144251,0.167506257441816,1.6663054862021,1.36593553500459,0.788175720530955,0.221464689648775,0.159454768657487,1.80249646187312,1.72684981865896,1.44649058581512,0,0.54390568381871,0.491764273019036,0.275936746304732,0.642202359951168,0.937693492737625,0,0.504941854408746,0.631016438832513,0.390438744296638,0.646270193198397,0,0.222798674082394,0.283076530788832,0.809621403349789,1.46127928955656,0.790575555893047,1.92792789853084,0.709700426041343,1.06839362200353,1.14020871547503,1.64970122972535,1.32745138339963,0.728341908464944,1.51161778482376,1.88605079755898,0,0.614870295887855,1.55056975900933,2.90826983582004,0.356497378384721,2.52829406348653,1.05418608574999,2.06271086496374,3.06395645178409,1.08036656418786,1.03486947026204,2.14337035031592,0.709360934569094,0.891844088010353,1.31639216481697,0.608929898229199,0.469343416127421,1.0591603543191,1.98475558249466,1.48397627647332,2.74489525383039,2.17126529741361,1.67121281604391,2.46211349617592,2.91480836629851,0.556275906031529,1.36696704638282,1.23832120777933,1.48155621895769,2.26042148405629,1.77702496037333,0.915112692826091,1.69978429993855,1.81936888020755,1.38199973804424,5.72802370809068,0.949007980743406,1.62655573701479,1.83609079397062,2.92723614420256,2.62035076495413,1.07891477107857,1.23980183588004,1.30877970992015,1.8146096260851,0.621339313086926,0.56369293868419,1.34564891439581,1.15820943319968,1.94451188344048,0.645799117388655,1.520605129417,2.69921648885234,1.17183946359555,1.46803082195995,2.17425708743405,2.88030006257865,0.632022241256357,0.810900861160657,0.821687657318618,1.42912905275575,0.716106782669926,1.19208812868759,1.56254084375959,1.62458479892035,1.81739609906666,1.5241361331,1.91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| |||
|short_description=p2@Chchd7 | |||
}} | |||
Revision as of 04:54, 14 September 2013
| Short description: | p2@Chchd7 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Chchd7_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -102bp_to_ENSMUST00000119403_5end |
| EntrezGene: | Chchd7 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system | 3.64e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
