FFCP PHASE1:Mm9::chr4:56815137..56815194,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=230233|HGNC=|MCL_coexpression_id=2929|UniProt=Q7TT37|association_with_transcript=8bp_to_ENSMUST00000030140,NM_026079,uc012del.1_5end|description=CAGE_peak_1_at_Ikbkap_5end|id=chr4:56815137..56815194,-|ontology_enrichment_celltype=CL:0000117!6.07e-07!23;CL:0000337!6.07e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,6.07e-07,23;CL:0000337,6.07e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!9.40e-17!94;UBERON:0003056!5.96e-16!49;UBERON:0000033!6.03e-15!63;UBERON:0002346!1.05e-14!71;UBERON:0003075!1.05e-14!71;UBERON:0007284!1.05e-14!71;UBERON:0000955!1.09e-13!50;UBERON:0006238!1.09e-13!50;UBERON:0001049!1.32e-13!52;UBERON:0005068!1.32e-13!52;UBERON:0006241!1.32e-13!52;UBERON:0007135!1.32e-13!52;UBERON:0007811!1.52e-13!86;UBERON:0003080!1.95e-13!40;UBERON:0002616!2.50e-13!49;UBERON:0002780!4.14e-13!39;UBERON:0001890!4.14e-13!39;UBERON:0006240!4.14e-13!39;UBERON:0001017!7.95e-11!73;UBERON:0005743!7.95e-11!73;UBERON:0002020!2.32e-10!34;UBERON:0002791!2.48e-10!29;UBERON:0003528!2.48e-10!29;UBERON:0001893!2.48e-10!29;UBERON:0004121!2.61e-10!102;UBERON:0000924!2.61e-10!102;UBERON:0006601!2.61e-10!102;UBERON:0000073!7.63e-10!75;UBERON:0001016!7.63e-10!75;UBERON:0000956!1.46e-07!21;UBERON:0001869!1.46e-07!21;UBERON:0000203!1.46e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.96e-16,49;UBERON:0002346,2.91e-15,64;UBERON:0003075,2.91e-15,64;UBERON:0007284,2.91e-15,64;UBERON:0010371,1.26e-13,73;UBERON:0001049,1.32e-13,52;UBERON:0005068,1.32e-13,52;UBERON:0006241,1.32e-13,52;UBERON:0007135,1.32e-13,52;UBERON:0000073,1.47e-13,54;UBERON:0010314,1.55e-13,92;UBERON:0000955,1.84e-13,47;UBERON:0006238,1.84e-13,47;UBERON:0003080,1.95e-13,40;UBERON:0002780,4.14e-13,39;UBERON:0001890,4.14e-13,39;UBERON:0006240,4.14e-13,39;UBERON:0002616,4.19e-13,46;UBERON:0001017,7.95e-11,73;UBERON:0002020,2.32e-10,34;UBERON:0004121,2.41e-10,95;UBERON:0000924,2.41e-10,95;UBERON:0006601,2.41e-10,95;UBERON:0003528,2.48e-10,29;UBERON:0002791,2.48e-10,29;UBERON:0001893,2.48e-10,29;UBERON:0001016,7.63e-10,75;UBERON:0000956,1.46e-07,21;UBERON:0001869,1.46e-07,21;UBERON:0000203,1.46e-07,21|phase1_expression=32.5102159622732,3.14077866875425,4.09499315450582,0.60492842261366,1.50268718983904,9.23335995515394,14.4839837169226,25.6955413648737,53.7812918619367,66.2402609491241,73.7949443051926,63.7379550372738,30.6449306576858,30.2474592369731,18.3210368998615,18.8301998672538,11.8925519281785,32.9657962799358,31.3992052957142,27.585327366872,21.0056926673142,27.702175385047,31.6051744858112,11.1994695955385,6.8822784320151,1.72269589234506,2.15380998079537,6.89507944594845,6.46079626151671,8.56902441183765,17.5167103417691,43.1820857952549,57.8160900329496,79.2408405077194,25.4189425381122,19.4494535069436,22.4586291888606,6.69650609179052,7.0320181007142,9.42342739152837,7.05877785637217,3.41522742479223,6.311634589405,16.1147927008739,20.3767631751224,19.6395024812999,11.7358701652206,12.8634842264463,6.59058548203415,17.8875507148341,16.5183977517928,8.62515386189829,29.3619560601039,20.3101399763176,20.5017217476903,16.9791227783725,23.7822755149168,18.5641953219879,47.9490012237247,61.3629535955558,41.1990412279016,11.8595586224196,8.00365316500025,6.29929802096979,8.89979726310277,2.8419204597844,3.89480143673926,6.53171119046643,44.5865332926454,48.1971199844136,46.6921414200068,25.4229376119385,27.1668305370485,50.0987368789162,53.1942364151212,59.7492211296514,31.9336054898227,36.3908913542785,37.1727810480109,52.7545150920775,61.2967212136145,55.2168172790166,37.1313388671837,35.4540444319958,35.1435969886663,39.4802304534715,41.5725307933381,57.038230422542,16.9626673066332,18.1371744256285,24.3486170509409,13.7667820317022,19.039197343817,12.4131734076698,14.9448576012964,10.7526452903361,17.1342192560737,14.9978683868691,8.57293815189467,6.00677276667578,27.1827800168993,14.115912515575,7.64415719119937,0,24.8964697162896,20.7755089689581,25.2762222507392,9.24889425724386,34.697676408721,32.5088284551966,44.2387583253646,34.1001335709598,28.8269371570073,27.2807979400247,34.6886686050329,19.8553214300887,22.2475470960936,20.0993106118677,15.0383793831479,35.9122406883248,20.5382612168166,30.547140947519,18.6391761218122,47.7232699128822,45.6593820853332,9.96282515313506,34.506755857705,25.1959147017231,29.480292680951,44.0384479850179,44.3775584734068,66.2198435634795,52.3211203778752,57.0245469846637,38.6485762880782,45.5897949220399,36.3566528945629,21.5224059155461,24.0086620511991,17.4666740385773,79.1132293213239,56.5559176906343,51.3177069945245,47.9241320717574,50.9593378643446,49.7081234705217,43.196495022035,32.855328083855,63.1614219293228,61.6485821347091,50.1460703867254,43.4007550206598,54.2192135989916,42.8350164822265,43.4200307820761,54.5353891082671,33.004019803722,33.1978800177983,20.1756084570871,38.7325194641389,53.2374156157088,41.9544603204165,40.9568392562414,43.6816594479236,36.0985044156465,36.2752953810636,31.9245347665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| ||
|EntrezGene=230233 | |||
|HGNC= | |||
|MCL_coexpression_id=2929 | |||
|UniProt=Q7TT37 | |||
|association_with_transcript=8bp_to_ENSMUST00000030140,NM_026079,uc012del.1_5end | |||
|description=CAGE_peak_1_at_Ikbkap_5end | |||
|id=chr4:56815137..56815194,- | |||
|ontology_enrichment_celltype=CL:0000117!6.07e-07!23;CL:0000337!6.07e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.07e-07,23;CL:0000337,6.07e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!9.40e-17!94;UBERON:0003056!5.96e-16!49;UBERON:0000033!6.03e-15!63;UBERON:0002346!1.05e-14!71;UBERON:0003075!1.05e-14!71;UBERON:0007284!1.05e-14!71;UBERON:0000955!1.09e-13!50;UBERON:0006238!1.09e-13!50;UBERON:0001049!1.32e-13!52;UBERON:0005068!1.32e-13!52;UBERON:0006241!1.32e-13!52;UBERON:0007135!1.32e-13!52;UBERON:0007811!1.52e-13!86;UBERON:0003080!1.95e-13!40;UBERON:0002616!2.50e-13!49;UBERON:0002780!4.14e-13!39;UBERON:0001890!4.14e-13!39;UBERON:0006240!4.14e-13!39;UBERON:0001017!7.95e-11!73;UBERON:0005743!7.95e-11!73;UBERON:0002020!2.32e-10!34;UBERON:0002791!2.48e-10!29;UBERON:0003528!2.48e-10!29;UBERON:0001893!2.48e-10!29;UBERON:0004121!2.61e-10!102;UBERON:0000924!2.61e-10!102;UBERON:0006601!2.61e-10!102;UBERON:0000073!7.63e-10!75;UBERON:0001016!7.63e-10!75;UBERON:0000956!1.46e-07!21;UBERON:0001869!1.46e-07!21;UBERON:0000203!1.46e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.96e-16,49;UBERON:0002346,2.91e-15,64;UBERON:0003075,2.91e-15,64;UBERON:0007284,2.91e-15,64;UBERON:0010371,1.26e-13,73;UBERON:0001049,1.32e-13,52;UBERON:0005068,1.32e-13,52;UBERON:0006241,1.32e-13,52;UBERON:0007135,1.32e-13,52;UBERON:0000073,1.47e-13,54;UBERON:0010314,1.55e-13,92;UBERON:0000955,1.84e-13,47;UBERON:0006238,1.84e-13,47;UBERON:0003080,1.95e-13,40;UBERON:0002780,4.14e-13,39;UBERON:0001890,4.14e-13,39;UBERON:0006240,4.14e-13,39;UBERON:0002616,4.19e-13,46;UBERON:0001017,7.95e-11,73;UBERON:0002020,2.32e-10,34;UBERON:0004121,2.41e-10,95;UBERON:0000924,2.41e-10,95;UBERON:0006601,2.41e-10,95;UBERON:0003528,2.48e-10,29;UBERON:0002791,2.48e-10,29;UBERON:0001893,2.48e-10,29;UBERON:0001016,7.63e-10,75;UBERON:0000956,1.46e-07,21;UBERON:0001869,1.46e-07,21;UBERON:0000203,1.46e-07,21 | |||
|phase1_expression=32.5102159622732,3.14077866875425,4.09499315450582,0.60492842261366,1.50268718983904,9.23335995515394,14.4839837169226,25.6955413648737,53.7812918619367,66.2402609491241,73.7949443051926,63.7379550372738,30.6449306576858,30.2474592369731,18.3210368998615,18.8301998672538,11.8925519281785,32.9657962799358,31.3992052957142,27.585327366872,21.0056926673142,27.702175385047,31.6051744858112,11.1994695955385,6.8822784320151,1.72269589234506,2.15380998079537,6.89507944594845,6.46079626151671,8.56902441183765,17.5167103417691,43.1820857952549,57.8160900329496,79.2408405077194,25.4189425381122,19.4494535069436,22.4586291888606,6.69650609179052,7.0320181007142,9.42342739152837,7.05877785637217,3.41522742479223,6.311634589405,16.1147927008739,20.3767631751224,19.6395024812999,11.7358701652206,12.8634842264463,6.59058548203415,17.8875507148341,16.5183977517928,8.62515386189829,29.3619560601039,20.3101399763176,20.5017217476903,16.9791227783725,23.7822755149168,18.5641953219879,47.9490012237247,61.3629535955558,41.1990412279016,11.8595586224196,8.00365316500025,6.29929802096979,8.89979726310277,2.8419204597844,3.89480143673926,6.53171119046643,44.5865332926454,48.1971199844136,46.6921414200068,25.4229376119385,27.1668305370485,50.0987368789162,53.1942364151212,59.7492211296514,31.9336054898227,36.3908913542785,37.1727810480109,52.7545150920775,61.2967212136145,55.2168172790166,37.1313388671837,35.4540444319958,35.1435969886663,39.4802304534715,41.5725307933381,57.038230422542,16.9626673066332,18.1371744256285,24.3486170509409,13.7667820317022,19.039197343817,12.4131734076698,14.9448576012964,10.7526452903361,17.1342192560737,14.9978683868691,8.57293815189467,6.00677276667578,27.1827800168993,14.115912515575,7.64415719119937,0,24.8964697162896,20.7755089689581,25.2762222507392,9.24889425724386,34.697676408721,32.5088284551966,44.2387583253646,34.1001335709598,28.8269371570073,27.2807979400247,34.6886686050329,19.8553214300887,22.2475470960936,20.0993106118677,15.0383793831479,35.9122406883248,20.5382612168166,30.547140947519,18.6391761218122,47.7232699128822,45.6593820853332,9.96282515313506,34.506755857705,25.1959147017231,29.480292680951,44.0384479850179,44.3775584734068,66.2198435634795,52.3211203778752,57.0245469846637,38.6485762880782,45.5897949220399,36.3566528945629,21.5224059155461,24.0086620511991,17.4666740385773,79.1132293213239,56.5559176906343,51.3177069945245,47.9241320717574,50.9593378643446,49.7081234705217,43.196495022035,32.855328083855,63.1614219293228,61.6485821347091,50.1460703867254,43.4007550206598,54.2192135989916,42.8350164822265,43.4200307820761,54.5353891082671,33.004019803722,33.1978800177983,20.1756084570871,38.7325194641389,53.2374156157088,41.9544603204165,40.9568392562414,43.6816594479236,36.0985044156465,36.2752953810636,31.9245347665547,34.5625413406822,30.2790123840804,32.3409904235818,25.2123997687611,28.9475975102158,27.0046641807992,25.9018388207517,49.2078479640058,65.138619636087,6.93879444265976,13.2225283331772,68.8921049228806,60.381534683714,41.366455084392,30.050845168878,29.5762798313678,19.403013863481,9.96511029243474,18.6109818838132,18.3474702424197,16.3144307073744,20.2762650603885,22.4704852163555,12.1037307929829,10.3553462092271,39.8302592001472,43.6429318169164,29.3040112750009,34.8243770615487,35.2993526645079,32.0520696898756,26.7490552035608,19.9273699772463,18.0548537017581,17.2756029490521,14.5261787272703,32.5347956146383,29.6804082620937,30.5812472843401,23.5317740810663,25.5647789337562,23.1709525121092,21.0018180339092,25.9416362840057,25.8087728396797,20.1275489138296,26.4220072844637,22.1546747911338,18.185679212192,17.9397413521912,16.4030797263545,21.4313700593261,49.4572584720965,49.3783878619338,42.0967812722467,34.4994664984098,30.8211513692941,25.7087132156895,25.9527751650872,31.8422991094506,31.0050565508285,23.1209414553356,25.5626770956551,25.5573773161525,25.0242871346015,22.6186925908908,17.9488875660174,21.6376280128376,18.7636987487218,45.9174687365085,45.1264993379982,34.4263385291018,23.7322671572111,27.7647233086306,24.5976408906882,29.9438522848591,32.021818925642,32.5286064160295,24.3445816478396,31.5752347306418,27.179794785752,30.8324466798288,44.984984299053,31.3687588310274,45.0505977278156,41.861948553869,27.2200702904683,26.5490276679926,48.7989078671513,43.5345922029242,34.5147295953294,28.3489817165542,38.121958345047,26.6181141963268,31.627434464543,43.1361827845513,30.6555655197742,22.1379078007497,20.6271086496374,34.3844001811326,55.9990002437375,57.8233316508913,38.5806663056866,41.1429342050075,45.6624173061301,36.694431594273,42.0161629778147,33.3233825450469,23.7251919367479,16.5396298541221,22.0947578941583,40.3661066739764,35.7655644823964,30.3205753767967,32.0074754502869,16.0314460146418,43.2040953684488,17.2579589605831,34.8793806857846,31.6682641802207,26.3715839806567,27.4755397719261,21.0475919350001,34.6755997187465,37.0871348657694,31.5095940274086,4.77335309007557,59.9456707836251,43.30704649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| |||
|short_description=p1@Ikbkap | |||
}} |
Revision as of 05:14, 14 September 2013
Short description: | p1@Ikbkap |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ikbkap_5end |
Coexpression cluster: | MCL_coexpression_mm9:2929 |
Association with transcript: | 8bp_to_ENSMUST00000030140, NM_026079, uc012del.1_5end |
EntrezGene: | Ikbkap |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.07e-07 | 23 |
neuroblast (sensu Vertebrata) | 6.07e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 5.96e-16 | 49 |
neurectoderm | 2.91e-15 | 64 |
neural plate | 2.91e-15 | 64 |
presumptive neural plate | 2.91e-15 | 64 |
ecto-epithelium | 1.26e-13 | 73 |
neural tube | 1.32e-13 | 52 |
neural rod | 1.32e-13 | 52 |
future spinal cord | 1.32e-13 | 52 |
neural keel | 1.32e-13 | 52 |
regional part of nervous system | 1.47e-13 | 54 |
structure with developmental contribution from neural crest | 1.55e-13 | 92 |
brain | 1.84e-13 | 47 |
future brain | 1.84e-13 | 47 |
anterior neural tube | 1.95e-13 | 40 |
regional part of forebrain | 4.14e-13 | 39 |
forebrain | 4.14e-13 | 39 |
future forebrain | 4.14e-13 | 39 |
regional part of brain | 4.19e-13 | 46 |
central nervous system | 7.95e-11 | 73 |
gray matter | 2.32e-10 | 34 |
ectoderm-derived structure | 2.41e-10 | 95 |
ectoderm | 2.41e-10 | 95 |
presumptive ectoderm | 2.41e-10 | 95 |
brain grey matter | 2.48e-10 | 29 |
regional part of telencephalon | 2.48e-10 | 29 |
telencephalon | 2.48e-10 | 29 |
nervous system | 7.63e-10 | 75 |
cerebral cortex | 1.46e-07 | 21 |
cerebral hemisphere | 1.46e-07 | 21 |
pallium | 1.46e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.