FFCP PHASE1:Mm9::chr4:88696200..88696228,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100040617|HGNC=|MCL_coexpression_id=72|UniProt=|association_with_transcript=0bp_to_ENSMUST00000146678,NR_033533,uc008toe.2_5end|description=CAGE_peak_1_at_Gm12603_5end|id=chr4:88696200..88696228,+|ontology_enrichment_celltype=CL:0000068!3.29e-15!3;CL:0002202!3.29e-15!3;CL:0000069!3.29e-15!3;CL:0002632!3.29e-15!3;CL:0002368!3.29e-15!3;CL:0000307!3.29e-15!3;CL:0000377!3.29e-15!3;CL:0000708!2.77e-10!2;CL:0000325!3.78e-10!2;CL:0000217!3.78e-10!2;CL:0000328!3.78e-10!2;CL:0002573!3.78e-10!2;CL:0002376!3.78e-10!2;CL:0000218!3.78e-10!2;CL:0000692!3.78e-10!2;CL:0002377!3.78e-10!2;CL:0002375!3.78e-10!2;CL:0000151!3.97e-07!3;CL:0000499!3.97e-07!3;CL:0000327!3.97e-07!3;CL:0000215!4.88e-07!3;CL:0000630!4.88e-07!3|ontology_enrichment_celltype_v019_2=CL:0000068,1.17e-38,3;CL:0002202,1.17e-38,3;CL:0000069,1.17e-38,3;CL:0002632,1.17e-38,3;CL:0002368,1.17e-38,3;CL:0000307,1.17e-38,3;CL:0000377,1.17e-38,3;CL:0002076,2.43e-08,15;CL:0000708,1.76e-07,2;CL:0000217,2.35e-07,2;CL:0000328,2.35e-07,2;CL:0002573,2.35e-07,2;CL:0002376,2.35e-07,2;CL:0000218,2.35e-07,2;CL:0000692,2.35e-07,2;CL:0002377,2.35e-07,2;CL:0002375,2.35e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003126!3.29e-15!3;UBERON:0001005!3.29e-15!3;UBERON:0007196!3.29e-15!3;UBERON:0001558!3.29e-15!3;UBERON:0003210!2.77e-10!2|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.17e-38,3;UBERON:0001005,1.17e-38,3;UBERON:0007196,1.17e-38,3;UBERON:0001558,1.17e-38,3;UBERON:0003210,1.76e-07,2;UBERON:0005178,1.96e-07,17;UBERON:0005181,1.96e-07,17;UBERON:0002224,1.96e-07,17;UBERON:0000915,1.96e-07,17;UBERON:0008947,1.96e-07,17;UBERON:0003258,1.96e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.513653904676515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,1.80081605225163,0,0,0,0,0,2.03306719241479,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21161909333094,0.604572480854284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.1231292747158,25.589346412985,22.2430755806505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.83609672260053,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Gm12603}} | ||
|EntrezGene=100040617 | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000146678,NR_033533,uc008toe.2_5end | |||
|description=CAGE_peak_1_at_Gm12603_5end | |||
|id=chr4:88696200..88696228,+ | |||
|ontology_enrichment_celltype=CL:0000068!3.29e-15!3;CL:0002202!3.29e-15!3;CL:0000069!3.29e-15!3;CL:0002632!3.29e-15!3;CL:0002368!3.29e-15!3;CL:0000307!3.29e-15!3;CL:0000377!3.29e-15!3;CL:0000708!2.77e-10!2;CL:0000325!3.78e-10!2;CL:0000217!3.78e-10!2;CL:0000328!3.78e-10!2;CL:0002573!3.78e-10!2;CL:0002376!3.78e-10!2;CL:0000218!3.78e-10!2;CL:0000692!3.78e-10!2;CL:0002377!3.78e-10!2;CL:0002375!3.78e-10!2;CL:0000151!3.97e-07!3;CL:0000499!3.97e-07!3;CL:0000327!3.97e-07!3;CL:0000215!4.88e-07!3;CL:0000630!4.88e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.17e-38,3;CL:0002202,1.17e-38,3;CL:0000069,1.17e-38,3;CL:0002632,1.17e-38,3;CL:0002368,1.17e-38,3;CL:0000307,1.17e-38,3;CL:0000377,1.17e-38,3;CL:0002076,2.43e-08,15;CL:0000708,1.76e-07,2;CL:0000217,2.35e-07,2;CL:0000328,2.35e-07,2;CL:0002573,2.35e-07,2;CL:0002376,2.35e-07,2;CL:0000218,2.35e-07,2;CL:0000692,2.35e-07,2;CL:0002377,2.35e-07,2;CL:0002375,2.35e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!3.29e-15!3;UBERON:0001005!3.29e-15!3;UBERON:0007196!3.29e-15!3;UBERON:0001558!3.29e-15!3;UBERON:0003210!2.77e-10!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.17e-38,3;UBERON:0001005,1.17e-38,3;UBERON:0007196,1.17e-38,3;UBERON:0001558,1.17e-38,3;UBERON:0003210,1.76e-07,2;UBERON:0005178,1.96e-07,17;UBERON:0005181,1.96e-07,17;UBERON:0002224,1.96e-07,17;UBERON:0000915,1.96e-07,17;UBERON:0008947,1.96e-07,17;UBERON:0003258,1.96e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.513653904676515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,1.80081605225163,0,0,0,0,0,2.03306719241479,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21161909333094,0.604572480854284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.1231292747158,25.589346412985,22.2430755806505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.83609672260053,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gm12603 | |||
}} |
Revision as of 05:34, 14 September 2013
Short description: | p1@Gm12603 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm12603_5end |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | 0bp_to_ENSMUST00000146678, NR_033533, uc008toe.2_5end |
EntrezGene: | Gm12603 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.17e-38 | 3 |
epithelial cell of tracheobronchial tree | 1.17e-38 | 3 |
branched duct epithelial cell | 1.17e-38 | 3 |
epithelial cell of lower respiratory tract | 1.17e-38 | 3 |
respiratory epithelial cell | 1.17e-38 | 3 |
tracheal epithelial cell | 1.17e-38 | 3 |
tracheoblast | 1.17e-38 | 3 |
endo-epithelial cell | 2.43e-08 | 15 |
leptomeningeal cell | 1.76e-07 | 2 |
insulating cell | 2.35e-07 | 2 |
myelin accumulating cell | 2.35e-07 | 2 |
Schwann cell | 2.35e-07 | 2 |
non-myelinating Schwann cell | 2.35e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 2.35e-07 | 2 |
terminal Schwann cell | 2.35e-07 | 2 |
immature Schwann cell | 2.35e-07 | 2 |
Schwann cell precursor | 2.35e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.17e-38 | 3 |
respiratory airway | 1.17e-38 | 3 |
tracheobronchial tree | 1.17e-38 | 3 |
lower respiratory tract | 1.17e-38 | 3 |
blood-cerebrospinal fluid barrier | 1.76e-07 | 2 |
thoracic cavity element | 1.96e-07 | 17 |
thoracic segment organ | 1.96e-07 | 17 |
thoracic cavity | 1.96e-07 | 17 |
thoracic segment of trunk | 1.96e-07 | 17 |
respiratory primordium | 1.96e-07 | 17 |
endoderm of foregut | 1.96e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.