FFCP PHASE1:Mm9::chr5:120285130..120285141,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=21388|HGNC=|MCL_coexpression_id=1465|UniProt=P70326,Q5CZX7|association_with_transcript=458bp_to_ENSMUST00000018407,NM_011537,uc008zgz.2_5end|description=CAGE_peak_3_at_Tbx5_5end|id=chr5:120285130..120285141,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!5.35e-18!18;UBERON:0000948!5.35e-18!18;UBERON:0005498!5.35e-18!18;UBERON:0004140!5.35e-18!18;UBERON:0009881!5.35e-18!18;UBERON:0004141!5.35e-18!18;UBERON:0003084!5.35e-18!18;UBERON:0007005!5.35e-18!18;UBERON:0004139!5.35e-18!18;UBERON:0004291!5.35e-18!18;UBERON:0004535!4.87e-14!23;UBERON:0001009!4.87e-14!23;UBERON:0002048!8.40e-13!14;UBERON:0000117!8.40e-13!14;UBERON:0000171!8.40e-13!14;UBERON:0000170!8.40e-13!14;UBERON:0005597!8.40e-13!14;UBERON:0000118!8.40e-13!14;UBERON:0005153!3.55e-11!17;UBERON:0005178!1.09e-09!17;UBERON:0005181!1.09e-09!17;UBERON:0002224!1.09e-09!17;UBERON:0000915!1.09e-09!17;UBERON:0008947!1.09e-09!17;UBERON:0003258!1.09e-09!17;UBERON:0004872!1.62e-08!33;UBERON:0003102!1.80e-07!23;UBERON:0002102!3.73e-07!8;UBERON:0004710!3.73e-07!8;UBERON:0005419!3.73e-07!8;UBERON:0005417!3.73e-07!8;UBERON:0005729!3.73e-07!8;UBERON:0000026!9.12e-07!13;UBERON:0004708!9.12e-07!13;UBERON:0002101!9.12e-07!13;UBERON:0004357!9.12e-07!13;UBERON:0009872!9.12e-07!13;UBERON:0004347!9.12e-07!13;UBERON:0005732!9.12e-07!13;UBERON:0005733!9.12e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.00e-32,18;UBERON:0000948,8.00e-32,18;UBERON:0005498,8.00e-32,18;UBERON:0004140,8.00e-32,18;UBERON:0009881,8.00e-32,18;UBERON:0004141,8.00e-32,18;UBERON:0003084,8.00e-32,18;UBERON:0007005,8.00e-32,18;UBERON:0004139,8.00e-32,18;UBERON:0004291,8.00e-32,18;UBERON:0004535,3.88e-24,23;UBERON:0001009,3.88e-24,23;UBERON:0002102,1.52e-18,7;UBERON:0004710,1.52e-18,7;UBERON:0005419,1.52e-18,7;UBERON:0005417,1.52e-18,7;UBERON:0005729,1.52e-18,7;UBERON:0002048,2.74e-18,14;UBERON:0000117,2.74e-18,14;UBERON:0000171,2.74e-18,14;UBERON:0000170,2.74e-18,14;UBERON:0005597,2.74e-18,14;UBERON:0000118,2.74e-18,14;UBERON:0010708,4.27e-16,8;UBERON:0004872,9.27e-16,33;UBERON:0001048,2.82e-15,134;UBERON:0005153,1.07e-14,17;UBERON:0005178,1.07e-14,17;UBERON:0005181,1.07e-14,17;UBERON:0002224,1.07e-14,17;UBERON:0000915,1.07e-14,17;UBERON:0008947,1.07e-14,17;UBERON:0003258,1.07e-14,17;UBERON:0000310,2.08e-13,6;UBERON:0001443,2.08e-13,6;UBERON:0003103,5.01e-13,43;UBERON:0005157,3.50e-12,20;UBERON:0003081,1.46e-10,87;UBERON:0000026,2.23e-10,12;UBERON:0004708,2.23e-10,12;UBERON:0002101,2.23e-10,12;UBERON:0004357,2.23e-10,12;UBERON:0004347,2.23e-10,12;UBERON:0005732,2.23e-10,12;UBERON:0005733,2.23e-10,12;UBERON:0003914,4.85e-10,47;UBERON:0000025,6.61e-10,114;UBERON:0004111,6.71e-10,122;UBERON:0010707,1.69e-09,13;UBERON:0000926,3.92e-07,120;UBERON:0004120,3.92e-07,120;UBERON:0006603,3.92e-07,120;UBERON:0003102,9.83e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0.433798070759735,0,0.323533699894818,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390361328888111,0.919608417733892,0.360124259610698,0.150704817835715,0.544291993210623,0.640568601424249,0.374806898238915,0.258703370739016,3.23351989399263,5.29497024469894,3.34307135911503,3.94552318369635,5.56094498451196,3.48252166522167,2.88094990971121,0,0,0,0,3.31401236056803,3.04883877975425,3.96136535214233,6.15536312521547,4.52557733019029,3.85667782218446,4.41814495025775,2.68273401399619,4.67061369468678,3.12663714835613,5.91002870684743,5.91802309684747,4.82459958503597,2.63460138349261,5.2340503316545,0,0,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,1.89491411770485,1.30371981153621,1.52770577197669,1.40814148973101,1.17254380209271,1.6663054862021,0.585400943573396,2.52216230569906,2.21464689648775,1.91345722388985,1.3109065177259,0.863424909329478,0.867894351489069,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.441056796109924,0,0.322928853391811,0.422190474497091,0.238744688006273,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,3.47741269257943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,1.19707462020309,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.128050304809739,0.516919220600519,0.952587382566147,0.347652977834566,0.192909220463705,0,0.441596760403192,0.685738504770831,0.354951612318675,0.476872379894642,0.581385666529314,0.564656282491984,0.338458431566706,0.182927972872773,0,0.814824683075171,0.561142271657738,0.237270036248348,0.197008964751127,0,0.154936841185966,0.771626443924566,0,0.233931608445408,0,0.382576664137687,0.220591419119515,0.463735671240843|short_description=p3@Tbx5}} | ||
|EntrezGene=21388 | |||
|HGNC= | |||
|MCL_coexpression_id=1465 | |||
|UniProt=P70326,Q5CZX7 | |||
|association_with_transcript=458bp_to_ENSMUST00000018407,NM_011537,uc008zgz.2_5end | |||
|description=CAGE_peak_3_at_Tbx5_5end | |||
|id=chr5:120285130..120285141,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.35e-18!18;UBERON:0000948!5.35e-18!18;UBERON:0005498!5.35e-18!18;UBERON:0004140!5.35e-18!18;UBERON:0009881!5.35e-18!18;UBERON:0004141!5.35e-18!18;UBERON:0003084!5.35e-18!18;UBERON:0007005!5.35e-18!18;UBERON:0004139!5.35e-18!18;UBERON:0004291!5.35e-18!18;UBERON:0004535!4.87e-14!23;UBERON:0001009!4.87e-14!23;UBERON:0002048!8.40e-13!14;UBERON:0000117!8.40e-13!14;UBERON:0000171!8.40e-13!14;UBERON:0000170!8.40e-13!14;UBERON:0005597!8.40e-13!14;UBERON:0000118!8.40e-13!14;UBERON:0005153!3.55e-11!17;UBERON:0005178!1.09e-09!17;UBERON:0005181!1.09e-09!17;UBERON:0002224!1.09e-09!17;UBERON:0000915!1.09e-09!17;UBERON:0008947!1.09e-09!17;UBERON:0003258!1.09e-09!17;UBERON:0004872!1.62e-08!33;UBERON:0003102!1.80e-07!23;UBERON:0002102!3.73e-07!8;UBERON:0004710!3.73e-07!8;UBERON:0005419!3.73e-07!8;UBERON:0005417!3.73e-07!8;UBERON:0005729!3.73e-07!8;UBERON:0000026!9.12e-07!13;UBERON:0004708!9.12e-07!13;UBERON:0002101!9.12e-07!13;UBERON:0004357!9.12e-07!13;UBERON:0009872!9.12e-07!13;UBERON:0004347!9.12e-07!13;UBERON:0005732!9.12e-07!13;UBERON:0005733!9.12e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.00e-32,18;UBERON:0000948,8.00e-32,18;UBERON:0005498,8.00e-32,18;UBERON:0004140,8.00e-32,18;UBERON:0009881,8.00e-32,18;UBERON:0004141,8.00e-32,18;UBERON:0003084,8.00e-32,18;UBERON:0007005,8.00e-32,18;UBERON:0004139,8.00e-32,18;UBERON:0004291,8.00e-32,18;UBERON:0004535,3.88e-24,23;UBERON:0001009,3.88e-24,23;UBERON:0002102,1.52e-18,7;UBERON:0004710,1.52e-18,7;UBERON:0005419,1.52e-18,7;UBERON:0005417,1.52e-18,7;UBERON:0005729,1.52e-18,7;UBERON:0002048,2.74e-18,14;UBERON:0000117,2.74e-18,14;UBERON:0000171,2.74e-18,14;UBERON:0000170,2.74e-18,14;UBERON:0005597,2.74e-18,14;UBERON:0000118,2.74e-18,14;UBERON:0010708,4.27e-16,8;UBERON:0004872,9.27e-16,33;UBERON:0001048,2.82e-15,134;UBERON:0005153,1.07e-14,17;UBERON:0005178,1.07e-14,17;UBERON:0005181,1.07e-14,17;UBERON:0002224,1.07e-14,17;UBERON:0000915,1.07e-14,17;UBERON:0008947,1.07e-14,17;UBERON:0003258,1.07e-14,17;UBERON:0000310,2.08e-13,6;UBERON:0001443,2.08e-13,6;UBERON:0003103,5.01e-13,43;UBERON:0005157,3.50e-12,20;UBERON:0003081,1.46e-10,87;UBERON:0000026,2.23e-10,12;UBERON:0004708,2.23e-10,12;UBERON:0002101,2.23e-10,12;UBERON:0004357,2.23e-10,12;UBERON:0004347,2.23e-10,12;UBERON:0005732,2.23e-10,12;UBERON:0005733,2.23e-10,12;UBERON:0003914,4.85e-10,47;UBERON:0000025,6.61e-10,114;UBERON:0004111,6.71e-10,122;UBERON:0010707,1.69e-09,13;UBERON:0000926,3.92e-07,120;UBERON:0004120,3.92e-07,120;UBERON:0006603,3.92e-07,120;UBERON:0003102,9.83e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0.433798070759735,0,0.323533699894818,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390361328888111,0.919608417733892,0.360124259610698,0.150704817835715,0.544291993210623,0.640568601424249,0.374806898238915,0.258703370739016,3.23351989399263,5.29497024469894,3.34307135911503,3.94552318369635,5.56094498451196,3.48252166522167,2.88094990971121,0,0,0,0,3.31401236056803,3.04883877975425,3.96136535214233,6.15536312521547,4.52557733019029,3.85667782218446,4.41814495025775,2.68273401399619,4.67061369468678,3.12663714835613,5.91002870684743,5.91802309684747,4.82459958503597,2.63460138349261,5.2340503316545,0,0,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,1.89491411770485,1.30371981153621,1.52770577197669,1.40814148973101,1.17254380209271,1.6663054862021,0.585400943573396,2.52216230569906,2.21464689648775,1.91345722388985,1.3109065177259,0.863424909329478,0.867894351489069,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.441056796109924,0,0.322928853391811,0.422190474497091,0.238744688006273,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,3.47741269257943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,1.19707462020309,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.128050304809739,0.516919220600519,0.952587382566147,0.347652977834566,0.192909220463705,0,0.441596760403192,0.685738504770831,0.354951612318675,0.476872379894642,0.581385666529314,0.564656282491984,0.338458431566706,0.182927972872773,0,0.814824683075171,0.561142271657738,0.237270036248348,0.197008964751127,0,0.154936841185966,0.771626443924566,0,0.233931608445408,0,0.382576664137687,0.220591419119515,0.463735671240843 | |||
|short_description=p3@Tbx5 | |||
}} |
Revision as of 06:13, 14 September 2013
Short description: | p3@Tbx5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tbx5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1465 |
Association with transcript: | 458bp_to_ENSMUST00000018407, NM_011537, uc008zgz.2_5end |
EntrezGene: | Tbx5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.