FFCP PHASE1:Mm9::chr5:124804548..124804563,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=13445|HGNC=|UniProt=O35207|association_with_transcript=73bp_to_NM_013812,uc008zpo.1_5end|description=CAGE_peak_3_at_Cdk2ap1_5end|id=chr5:124804548..124804563,-|ontology_enrichment_celltype=CL:0000548!3.71e-07!115;CL:0000004!3.71e-07!115;CL:0000255!3.71e-07!115|ontology_enrichment_celltype_v019_2=CL:0000988,2.78e-08,32;CL:0002032,2.78e-08,32;CL:0000037,2.78e-08,32;CL:0000837,2.78e-08,32;CL:0000034,3.11e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.480446541314382,0.348975407639361,0.909998478779072,0.90739263392049,1.50268718983904,1.17515490338323,1.16806320297763,0.516493293766305,1.12630977721333,0.936258105287974,2.22583358693156,1.91453181588807,1.19840510951844,1.31130603628496,2.6648780945253,0.404950534779652,2.09868563438444,1.10411757875383,0.411343300817216,0.42438965179803,0.340173160604279,1.19149141441062,3.6567970479451,1.75991665072747,0.91763712426868,0.57423196411502,0.86152399231815,0.861884930743556,0.950117097281869,1.00812051903972,0.665191531965914,3.81018404075779,2.46025915033828,0,1.73310971850765,0.664938581433969,1.02084678131185,0,0,0.523523743973798,0,0,0,0.125896817975577,0,0.367093504323363,0,1.30815093828268,1.09843091367236,0.194429899074283,0.979904951377538,1.43752564364972,0.838913030288682,2.17608642603403,0.672187598284928,0.771778308107841,0.286533439938757,0,1.21389876515759,1.05798195854407,1.90149421051854,0.677689064138264,0.889294796111139,0.449949858640699,0,1.4209602298922,0.299600110518405,2.30530983192933,1.55534418462716,2.8351247049655,1.89292465216244,0.285650984403804,1.10434270475807,0.734944795289724,1.62937300731002,2.75765635983006,0,0.383062014255563,1.22885226604995,0.395658863190582,1.18933936683133,0.52091337055676,1.3959149950069,0,0.763991238884051,0.883885756421003,0.711858403995515,1.1183966749518,1.06016670666458,0.604572480854284,0.869593466105033,0.860423876981386,0.679971333707751,0,0.649776417447669,0.448026887097336,1.12355536105401,0.170430322578058,1.03914401841148,1.7666978725517,0.14084341977668,0,0,0,1.73192832808971,1.77351905832569,1.51657333504435,0.5709193985953,0.776813650941515,0.29688427812965,0.520455980298408,0.913396434936424,0.922461989024234,0.60289056221049,0.823120949949934,0.376999773989026,0,0.144599356919912,2.65383165584962,0.808834249737046,0.441683036920787,0,0,0.585561594023094,1.67557365450764,0.510914110417183,1.7972268675888,2.39961092397363,1.14363204365758,0.299581278809645,0,0,1.21677024134594,0.255715457330331,0.62336413367868,0.162241263067758,1.01839363850316,0.124406970610093,1.51633655060205,0.631325567659422,1.56144531555244,1.60931473103431,1.62055916824814,0.150704817835715,0.544291993210623,0.2562274405697,1.59292931751539,0.258703370739016,1.29340795759705,1.89106080167819,1.05570674498369,1.31517439456545,0,0.696504333044333,0.411564272815887,0.59710280045548,1.40442637462647,1.02939162845886,1.13665399758237,1.24275463521301,2.11073453982987,0.540186184383045,1.18372367792605,0.590292695242212,0.462801338662135,0.697601834251224,0.268273401399619,1.05088808130453,0.987359099480883,0.164167464079095,0.648550476366846,0.584799949701329,1.09775057645525,0.402619256281115,0.420579897128254,0.617427674275707,0,1.05780226665418,1.2797295032114,0,0.77320476793256,1.21010114774006,0.444756087689741,0.380451252225118,0.949058123089023,0.823494773620054,0.502670417600539,0,0.58489226135736,0,0.216138049874694,0.597423819763102,2.84501851429623,0.342745537829186,3.38123207019241,1.4255592949172,0.387904974335251,0.701358198903186,0.505892296994058,0.295220295959204,0,0.123397163921801,0,1.33476084572875,0.786235980452812,1.34917267430912,0.811440485554012,0.482354319504834,0.763877555344259,0.575392274901621,0.648540907100142,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0.538192240565737,0.964887042726734,0,0.947457058852424,1.46668478797823,0.169745085775188,0.469380496577004,0.502518772325447,0.714130922658041,0.975668239288994,0.945810864637146,0.221464689648775,0.318909537314974,0.327726629431476,0,0.433947175744535,0,1.08781136763742,1.96705709207614,1.10374698521893,0.481651769963376,0.468846746368813,0.655739781506702,0.757412781613119,1.89304931649754,2.34263246577983,0.646270193198397,1.19484398976276,0.891194696329576,0.849229592366497,0.809621403349789,1.16902343164525,0.395287777946524,0,0.851640511249612,0.35613120733451,0.162886959353576,0.494910368917606,1.32745138339963,0,0.302323556964751,1.13163047853539,0.885905678642318,0,0,0,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.900305470156551,0.646793418913773,0.428674070063185,1.06404140185364,0.891844088010353,0.658196082408484,0.608929898229199,0,0,0,1.81374878235628,1.29171541356724,0.120625849856312,0.238744688006273,0.492422699235184,0.291480836629851,1.29797711407357,1.02522528478712,0.412773735926445,0.370389054739423,0.188368457004691,0.683471138605126,0.457556346413045,0.679913719975421,0.839708713941948,0.414599921413271,0.954670618015114,1.42351197111511,0.813277868507395,0.216010681643603,0.627264888043406,0.218362563746178,0.404593039154462,0.330613822901344,0.523511883968059,0.388844919875379,0.621339313086926,0.56369293868419,0.598066184175915,0.165458490457098,0.777804753376191,0.645799117388655,1.35164900392623,0.938857909166032,0.2604087696879,0.734015410979976,0.483168241652012,0.288030006257865,0.948033361884535,0.608175645870493,1.1298205288131,0.909445760844565,2.14832034800978,2.18549490259391,1.32214994471966,1.03382669022204,1.00966449948148,0.533447646584999,1.20991422164209,0.974578807397524,0.577271049841977,0.233753804363138,0.226730383615211,1.10992976687032,1.52513556236109,2.3503846290971,0.579568782096571,0.563047426353546,0.183151624267265,0,1.00314420807073,1.12950368523413,0,0.572895513439397,1.3748254587495,0.685082519770642,0.755393897389701,2.02506750069542,0.45032120322422,0.906284817968409,1.03552062350364,1.14166082342594,0,0.853668028770671,0.972426868273176,1.25767897576789,0.735374033800057,0.888986911206461,0.618105171716683,1.60459604795908,0.252697211763798,0.50695859978048,1.50901073108861,0.842773567228942,0.832326981263301,0.516919220600519,0,0.695305955669133,0.578727661391115,0.824171801606613,0.883193520806384,0,0.177475806159338,0.715308569841963,0.581385666529314,0.846984423737976,0.423073039458382,0.365855945745545,0.263069711437843,0.814824683075171,0.561142271657738,0.355905054372522,0.689531376628944,0.409231043169689,1.08455788830176,0.192906610981141,0.499621155875892,0.701794825336225,1.28922632428979,0.382576664137687,0,0.231867835620421|short_description=p3@Cdk2ap1}} | ||
|EntrezGene=13445 | |||
|HGNC= | |||
|UniProt=O35207 | |||
|association_with_transcript=73bp_to_NM_013812,uc008zpo.1_5end | |||
|description=CAGE_peak_3_at_Cdk2ap1_5end | |||
|id=chr5:124804548..124804563,- | |||
|ontology_enrichment_celltype=CL:0000548!3.71e-07!115;CL:0000004!3.71e-07!115;CL:0000255!3.71e-07!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.78e-08,32;CL:0002032,2.78e-08,32;CL:0000037,2.78e-08,32;CL:0000837,2.78e-08,32;CL:0000034,3.11e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.909998478779072,0.90739263392049,1.50268718983904,1.17515490338323,1.16806320297763,0.516493293766305,1.12630977721333,0.936258105287974,2.22583358693156,1.91453181588807,1.19840510951844,1.31130603628496,2.6648780945253,0.404950534779652,2.09868563438444,1.10411757875383,0.411343300817216,0.42438965179803,0.340173160604279,1.19149141441062,3.6567970479451,1.75991665072747,0.91763712426868,0.57423196411502,0.86152399231815,0.861884930743556,0.950117097281869,1.00812051903972,0.665191531965914,3.81018404075779,2.46025915033828,0,1.73310971850765,0.664938581433969,1.02084678131185,0,0,0.523523743973798,0,0,0,0.125896817975577,0,0.367093504323363,0,1.30815093828268,1.09843091367236,0.194429899074283,0.979904951377538,1.43752564364972,0.838913030288682,2.17608642603403,0.672187598284928,0.771778308107841,0.286533439938757,0,1.21389876515759,1.05798195854407,1.90149421051854,0.677689064138264,0.889294796111139,0.449949858640699,0,1.4209602298922,0.299600110518405,2.30530983192933,1.55534418462716,2.8351247049655,1.89292465216244,0.285650984403804,1.10434270475807,0.734944795289724,1.62937300731002,2.75765635983006,0,0.383062014255563,1.22885226604995,0.395658863190582,1.18933936683133,0.52091337055676,1.3959149950069,0,0.763991238884051,0.883885756421003,0.711858403995515,1.1183966749518,1.06016670666458,0.604572480854284,0.869593466105033,0.860423876981386,0.679971333707751,0,0.649776417447669,0.448026887097336,1.12355536105401,0.170430322578058,1.03914401841148,1.7666978725517,0.14084341977668,0,0,0,1.73192832808971,1.77351905832569,1.51657333504435,0.5709193985953,0.776813650941515,0.29688427812965,0.520455980298408,0.913396434936424,0.922461989024234,0.60289056221049,0.823120949949934,0.376999773989026,0,0.144599356919912,2.65383165584962,0.808834249737046,0.441683036920787,0,0,0.585561594023094,1.67557365450764,0.510914110417183,1.7972268675888,2.39961092397363,1.14363204365758,0.299581278809645,0,0,1.21677024134594,0.255715457330331,0.62336413367868,0.162241263067758,1.01839363850316,0.124406970610093,1.51633655060205,0.631325567659422,1.56144531555244,1.60931473103431,1.62055916824814,0.150704817835715,0.544291993210623,0.2562274405697,1.59292931751539,0.258703370739016,1.29340795759705,1.89106080167819,1.05570674498369,1.31517439456545,0,0.696504333044333,0.411564272815887,0.59710280045548,1.40442637462647,1.02939162845886,1.13665399758237,1.24275463521301,2.11073453982987,0.540186184383045,1.18372367792605,0.590292695242212,0.462801338662135,0.697601834251224,0.268273401399619,1.05088808130453,0.987359099480883,0.164167464079095,0.648550476366846,0.584799949701329,1.09775057645525,0.402619256281115,0.420579897128254,0.617427674275707,0,1.05780226665418,1.2797295032114,0,0.77320476793256,1.21010114774006,0.444756087689741,0.380451252225118,0.949058123089023,0.823494773620054,0.502670417600539,0,0.58489226135736,0,0.216138049874694,0.597423819763102,2.84501851429623,0.342745537829186,3.38123207019241,1.4255592949172,0.387904974335251,0.701358198903186,0.505892296994058,0.295220295959204,0,0.123397163921801,0,1.33476084572875,0.786235980452812,1.34917267430912,0.811440485554012,0.482354319504834,0.763877555344259,0.575392274901621,0.648540907100142,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0.538192240565737,0.964887042726734,0,0.947457058852424,1.46668478797823,0.169745085775188,0.469380496577004,0.502518772325447,0.714130922658041,0.975668239288994,0.945810864637146,0.221464689648775,0.318909537314974,0.327726629431476,0,0.433947175744535,0,1.08781136763742,1.96705709207614,1.10374698521893,0.481651769963376,0.468846746368813,0.655739781506702,0.757412781613119,1.89304931649754,2.34263246577983,0.646270193198397,1.19484398976276,0.891194696329576,0.849229592366497,0.809621403349789,1.16902343164525,0.395287777946524,0,0.851640511249612,0.35613120733451,0.162886959353576,0.494910368917606,1.32745138339963,0,0.302323556964751,1.13163047853539,0.885905678642318,0,0,0,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.900305470156551,0.646793418913773,0.428674070063185,1.06404140185364,0.891844088010353,0.658196082408484,0.608929898229199,0,0,0,1.81374878235628,1.29171541356724,0.120625849856312,0.238744688006273,0.492422699235184,0.291480836629851,1.29797711407357,1.02522528478712,0.412773735926445,0.370389054739423,0.188368457004691,0.683471138605126,0.457556346413045,0.679913719975421,0.839708713941948,0.414599921413271,0.954670618015114,1.42351197111511,0.813277868507395,0.216010681643603,0.627264888043406,0.218362563746178,0.404593039154462,0.330613822901344,0.523511883968059,0.388844919875379,0.621339313086926,0.56369293868419,0.598066184175915,0.165458490457098,0.777804753376191,0.645799117388655,1.35164900392623,0.938857909166032,0.2604087696879,0.734015410979976,0.483168241652012,0.288030006257865,0.948033361884535,0.608175645870493,1.1298205288131,0.909445760844565,2.14832034800978,2.18549490259391,1.32214994471966,1.03382669022204,1.00966449948148,0.533447646584999,1.20991422164209,0.974578807397524,0.577271049841977,0.233753804363138,0.226730383615211,1.10992976687032,1.52513556236109,2.3503846290971,0.579568782096571,0.563047426353546,0.183151624267265,0,1.00314420807073,1.12950368523413,0,0.572895513439397,1.3748254587495,0.685082519770642,0.755393897389701,2.02506750069542,0.45032120322422,0.906284817968409,1.03552062350364,1.14166082342594,0,0.853668028770671,0.972426868273176,1.25767897576789,0.735374033800057,0.888986911206461,0.618105171716683,1.60459604795908,0.252697211763798,0.50695859978048,1.50901073108861,0.842773567228942,0.832326981263301,0.516919220600519,0,0.695305955669133,0.578727661391115,0.824171801606613,0.883193520806384,0,0.177475806159338,0.715308569841963,0.581385666529314,0.846984423737976,0.423073039458382,0.365855945745545,0.263069711437843,0.814824683075171,0.561142271657738,0.355905054372522,0.689531376628944,0.409231043169689,1.08455788830176,0.192906610981141,0.499621155875892,0.701794825336225,1.28922632428979,0.382576664137687,0,0.231867835620421 | |||
|short_description=p3@Cdk2ap1 | |||
}} | |||
Revision as of 06:27, 14 September 2013
| Short description: | p3@Cdk2ap1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Cdk2ap1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 73bp_to_NM_013812, uc008zpo.1_5end |
| EntrezGene: | Cdk2ap1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic cell | 2.78e-08 | 32 |
| hematopoietic oligopotent progenitor cell | 2.78e-08 | 32 |
| hematopoietic stem cell | 2.78e-08 | 32 |
| hematopoietic multipotent progenitor cell | 2.78e-08 | 32 |
| stem cell | 3.11e-07 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
