FFCP PHASE1:Mm9::chr5:14521603..14521615,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=39|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:14521603..14521615,+|id=chr5:14521603..14521615,+|ontology_enrichment_celltype=CL:0000117!7.59e-10!23;CL:0000337!7.59e-10!23;CL:0000540!2.04e-07!33;CL:0000047!2.04e-07!33;CL:0000031!2.04e-07!33;CL:0000404!2.04e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,7.94e-08,23;CL:0000337,7.94e-08,23;CL:0002610,6.45e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.31e-25!71;UBERON:0003075!6.31e-25!71;UBERON:0007284!6.31e-25!71;UBERON:0001017!3.24e-23!73;UBERON:0005743!3.24e-23!73;UBERON:0000073!1.13e-22!75;UBERON:0001016!1.13e-22!75;UBERON:0001049!5.51e-22!52;UBERON:0005068!5.51e-22!52;UBERON:0006241!5.51e-22!52;UBERON:0007135!5.51e-22!52;UBERON:0000033!9.33e-22!63;UBERON:0000955!1.99e-21!50;UBERON:0006238!1.99e-21!50;UBERON:0004121!3.46e-21!102;UBERON:0000924!3.46e-21!102;UBERON:0006601!3.46e-21!102;UBERON:0002616!1.19e-20!49;UBERON:0003056!2.65e-20!49;UBERON:0003080!3.63e-17!40;UBERON:0002780!1.93e-16!39;UBERON:0001890!1.93e-16!39;UBERON:0006240!1.93e-16!39;UBERON:0002020!2.25e-15!34;UBERON:0002791!6.98e-13!29;UBERON:0003528!6.98e-13!29;UBERON:0001893!6.98e-13!29;UBERON:0007811!8.69e-13!86;UBERON:0000153!1.43e-10!94;UBERON:0000956!1.48e-09!21;UBERON:0001869!1.48e-09!21;UBERON:0000203!1.48e-09!21;UBERON:0002021!3.92e-09!10;UBERON:0000411!3.92e-09!10;UBERON:0001950!3.92e-09!10;UBERON:0002619!7.20e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.82e-36,54;UBERON:0001049,3.80e-33,52;UBERON:0005068,3.80e-33,52;UBERON:0006241,3.80e-33,52;UBERON:0007135,3.80e-33,52;UBERON:0001017,3.92e-33,73;UBERON:0001016,4.69e-32,75;UBERON:0000955,7.65e-32,47;UBERON:0006238,7.65e-32,47;UBERON:0002616,5.10e-30,46;UBERON:0002346,6.41e-30,64;UBERON:0003075,6.41e-30,64;UBERON:0007284,6.41e-30,64;UBERON:0004121,2.92e-27,95;UBERON:0000924,2.92e-27,95;UBERON:0006601,2.92e-27,95;UBERON:0010371,2.25e-25,73;UBERON:0003080,2.01e-24,40;UBERON:0003056,4.98e-23,49;UBERON:0002780,9.50e-23,39;UBERON:0001890,9.50e-23,39;UBERON:0006240,9.50e-23,39;UBERON:0002020,1.54e-21,34;UBERON:0003528,2.25e-20,29;UBERON:0002791,2.25e-20,29;UBERON:0001893,2.25e-20,29;UBERON:0002021,3.56e-19,10;UBERON:0000411,3.56e-19,10;UBERON:0001950,3.56e-19,10;UBERON:0010314,1.07e-18,92;UBERON:0002619,1.22e-15,17;UBERON:0000956,1.10e-14,21;UBERON:0001869,1.10e-14,21;UBERON:0000203,1.10e-14,21;UBERON:0000025,1.49e-12,114;UBERON:0004111,2.77e-11,122;UBERON:0003076,6.19e-09,12;UBERON:0003057,6.19e-09,12;UBERON:0011216,1.37e-08,194;UBERON:0000483,2.62e-07,174;UBERON:0000119,3.81e-07,176;UBERON:0004684,6.45e-07,3;UBERON:0002275,6.45e-07,3;UBERON:0002420,7.32e-07,8;UBERON:0007245,7.32e-07,8;UBERON:0010009,7.32e-07,8;UBERON:0010011,7.32e-07,8;UBERON:0000454,7.32e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.622137673850866,0.405017814995072,0.210324961351382,0.285650984403804,0.441737081903227,0.489963196859816,0.191690942036473,0,1.10115880999389,1.40456071893706,1.53606533256243,0.791317726381163,1.64677758484337,0,0.279182999001381,2.25105044012672,1.5279824777681,2.06240009831567,3.27454865837937,0.372798891650601,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.593768556259299,0,0.304465478312141,0,0.150722640552623,0.470354828542819,0.628332956648377,0,0,0,0,0,0,0,4.68449275218475,5.23616767033638,0.255457055208591,0,0,0,1.9472783122627,1.83000241127451,1.38219787324151,3.12883776346098,3.58001640262463,2.49345653471472,2.43361894601636,0,0,0,0.631325567659422,0.390361328888111,0,0.180062129805349,0.60281927134286,0.408218994907967,1.0249097622788,0.562210347358373,3.3631438196072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,1.68231958851302,2.05809224758569,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0.397912944082302,0,0,0,0,0,0.456994050438915,0,0,0.193952487167626,0.280543279561274,0,0.442830443938806,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,1.12385412991454,1.40654023910644,0,0,0,0,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0,0.395287777946524,2.24924921495265,0.141940085208269,0,0,0,0,0.728341908464944,0.906970670894253,0.377210159511796,0.295301892880773,0.614870295887855,0.516856586336442,0.727067458955011,0,0.948110273807448,0,0,4.42571487479924,0.18006109403131,0.129358683782755,0,0.532020700926821,1.42695054081656,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.324016022465404,0.209088296014469,0.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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:14521603..14521615,+ | |||
|id=chr5:14521603..14521615,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.59e-10!23;CL:0000337!7.59e-10!23;CL:0000540!2.04e-07!33;CL:0000047!2.04e-07!33;CL:0000031!2.04e-07!33;CL:0000404!2.04e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.94e-08,23;CL:0000337,7.94e-08,23;CL:0002610,6.45e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.31e-25!71;UBERON:0003075!6.31e-25!71;UBERON:0007284!6.31e-25!71;UBERON:0001017!3.24e-23!73;UBERON:0005743!3.24e-23!73;UBERON:0000073!1.13e-22!75;UBERON:0001016!1.13e-22!75;UBERON:0001049!5.51e-22!52;UBERON:0005068!5.51e-22!52;UBERON:0006241!5.51e-22!52;UBERON:0007135!5.51e-22!52;UBERON:0000033!9.33e-22!63;UBERON:0000955!1.99e-21!50;UBERON:0006238!1.99e-21!50;UBERON:0004121!3.46e-21!102;UBERON:0000924!3.46e-21!102;UBERON:0006601!3.46e-21!102;UBERON:0002616!1.19e-20!49;UBERON:0003056!2.65e-20!49;UBERON:0003080!3.63e-17!40;UBERON:0002780!1.93e-16!39;UBERON:0001890!1.93e-16!39;UBERON:0006240!1.93e-16!39;UBERON:0002020!2.25e-15!34;UBERON:0002791!6.98e-13!29;UBERON:0003528!6.98e-13!29;UBERON:0001893!6.98e-13!29;UBERON:0007811!8.69e-13!86;UBERON:0000153!1.43e-10!94;UBERON:0000956!1.48e-09!21;UBERON:0001869!1.48e-09!21;UBERON:0000203!1.48e-09!21;UBERON:0002021!3.92e-09!10;UBERON:0000411!3.92e-09!10;UBERON:0001950!3.92e-09!10;UBERON:0002619!7.20e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.82e-36,54;UBERON:0001049,3.80e-33,52;UBERON:0005068,3.80e-33,52;UBERON:0006241,3.80e-33,52;UBERON:0007135,3.80e-33,52;UBERON:0001017,3.92e-33,73;UBERON:0001016,4.69e-32,75;UBERON:0000955,7.65e-32,47;UBERON:0006238,7.65e-32,47;UBERON:0002616,5.10e-30,46;UBERON:0002346,6.41e-30,64;UBERON:0003075,6.41e-30,64;UBERON:0007284,6.41e-30,64;UBERON:0004121,2.92e-27,95;UBERON:0000924,2.92e-27,95;UBERON:0006601,2.92e-27,95;UBERON:0010371,2.25e-25,73;UBERON:0003080,2.01e-24,40;UBERON:0003056,4.98e-23,49;UBERON:0002780,9.50e-23,39;UBERON:0001890,9.50e-23,39;UBERON:0006240,9.50e-23,39;UBERON:0002020,1.54e-21,34;UBERON:0003528,2.25e-20,29;UBERON:0002791,2.25e-20,29;UBERON:0001893,2.25e-20,29;UBERON:0002021,3.56e-19,10;UBERON:0000411,3.56e-19,10;UBERON:0001950,3.56e-19,10;UBERON:0010314,1.07e-18,92;UBERON:0002619,1.22e-15,17;UBERON:0000956,1.10e-14,21;UBERON:0001869,1.10e-14,21;UBERON:0000203,1.10e-14,21;UBERON:0000025,1.49e-12,114;UBERON:0004111,2.77e-11,122;UBERON:0003076,6.19e-09,12;UBERON:0003057,6.19e-09,12;UBERON:0011216,1.37e-08,194;UBERON:0000483,2.62e-07,174;UBERON:0000119,3.81e-07,176;UBERON:0004684,6.45e-07,3;UBERON:0002275,6.45e-07,3;UBERON:0002420,7.32e-07,8;UBERON:0007245,7.32e-07,8;UBERON:0010009,7.32e-07,8;UBERON:0010011,7.32e-07,8;UBERON:0000454,7.32e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.622137673850866,0.405017814995072,0.210324961351382,0.285650984403804,0.441737081903227,0.489963196859816,0.191690942036473,0,1.10115880999389,1.40456071893706,1.53606533256243,0.791317726381163,1.64677758484337,0,0.279182999001381,2.25105044012672,1.5279824777681,2.06240009831567,3.27454865837937,0.372798891650601,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.593768556259299,0,0.304465478312141,0,0.150722640552623,0.470354828542819,0.628332956648377,0,0,0,0,0,0,0,4.68449275218475,5.23616767033638,0.255457055208591,0,0,0,1.9472783122627,1.83000241127451,1.38219787324151,3.12883776346098,3.58001640262463,2.49345653471472,2.43361894601636,0,0,0,0.631325567659422,0.390361328888111,0,0.180062129805349,0.60281927134286,0.408218994907967,1.0249097622788,0.562210347358373,3.3631438196072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,1.68231958851302,2.05809224758569,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0.397912944082302,0,0,0,0,0,0.456994050438915,0,0,0.193952487167626,0.280543279561274,0,0.442830443938806,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,1.12385412991454,1.40654023910644,0,0,0,0,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0,0.395287777946524,2.24924921495265,0.141940085208269,0,0,0,0,0.728341908464944,0.906970670894253,0.377210159511796,0.295301892880773,0.614870295887855,0.516856586336442,0.727067458955011,0,0.948110273807448,0,0,4.42571487479924,0.18006109403131,0.129358683782755,0,0.532020700926821,1.42695054081656,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,6.7770221114048,2.30162618253588,3.43737308063638,3.26521046453006,1.37016503954128,3.0215755895588,0.675022500231806,3.15224842256954,3.62513927187364,2.5888015587591,0.103787347584177,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.44449345560323,0.412070114477788,0.962757628775446,0.505394423527595,0,0.565879024158229,0.280924522409647,0.512201219238954,0.229741875822453,0,0,0.578727661391115,0,0.294397840268795,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0.25384382367503,0.73171189149109,0.263069711437843,0.407412341537585,0,0.237270036248348,0.985044823755635,0,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr5:14521603..14521615,+ | |||
}} |
Revision as of 06:59, 14 September 2013
Short description: | p@chr5:14521603..14521615, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:14521603..14521615, + |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.94e-08 | 23 |
neuroblast (sensu Vertebrata) | 7.94e-08 | 23 |
raphe nuclei neuron | 6.45e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.