FFCP PHASE1:Mm9::chr5:77380185..77380199,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=231327|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000031158_5end|description=CAGE_peak_3_at_Ppat_5end|id=chr5:77380185..77380199,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001041!1.87e-11!92;UBERON:0001048!3.52e-11!147;UBERON:0000926!9.94e-11!193;UBERON:0004120!9.94e-11!193;UBERON:0006603!9.94e-11!193;UBERON:0000077!1.34e-09!97;UBERON:0005057!8.86e-09!51;UBERON:0003104!3.87e-08!131;UBERON:0009142!3.87e-08!131;UBERON:0000466!1.16e-07!79;UBERON:0000949!3.23e-07!72;UBERON:0005172!5.88e-07!49;UBERON:0005173!5.88e-07!49;UBERON:0002417!5.88e-07!49;UBERON:0000916!5.88e-07!49;UBERON:0005177!7.41e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.40e-09,79;UBERON:0001041,4.52e-08,80;UBERON:0001048,7.15e-08,134;UBERON:0000949,9.04e-08,72;UBERON:0005172,5.16e-07,49;UBERON:0005173,5.16e-07,49;UBERON:0002417,5.16e-07,49;UBERON:0000916,5.16e-07,49|phase1_expression=2.24208385946712,0,0,0,0.500895729946347,1.17515490338323,1.40167584357315,1.42035655785734,11.9670413828917,7.95819389494778,3.93801326918661,4.3874687447435,1.71200729931206,1.13646523144697,5.66286595086627,5.26435695213547,6.29605690315332,0.946386496074713,1.09691546884591,0.84877930359606,1.19060606211498,3.97163804803541,4.96279599363977,0.47997726838022,0.68822784320151,0,0,0.430942465371778,0.570070258369122,0.252030129759931,1.77384408524244,4.44521471421742,3.69038872550742,0,1.1554064790051,3.32469290716985,2.85837098767317,0.418531630736908,0.7813353445238,1.0470474879476,0,0,0,0.503587271902309,0.405507724878058,0.183546752161682,0,0.218025156380447,0,0.58328969722285,0.699932108126813,0,1.67782606057736,1.45072428402269,2.01656279485478,1.02903774414379,0.286533439938757,1.03134418455488,1.01158230429799,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,0.675029691658453,0,0.285650984403804,0.662605622854841,1.22490799214954,1.0543001812006,0,0,0.255374676170375,0.614426133024974,0.791317726381163,0.365950574409639,1.04182674111352,0.837548997004143,0,0.763991238884051,0.589257170947335,0.854230084794618,0.931997229126503,1.8931548333296,1.43585964202892,1.15945795480671,0,2.03991400112325,3.2382191498269,3.89865850468601,4.03224198387602,1.82577746171277,1.53387290320252,0.519572009205738,0.70667914902068,1.40843419776681,1.28326477414318,0,0,1.73192832808971,0.253359865475099,3.0331466700887,1.82694207550496,0.776813650941515,0.890652834388949,1.21439728736295,0.304465478312141,1.38369298353635,1.20578112442098,1.52865319276416,0.628332956648377,1.97755974187499,0.722996784599558,2.65383165584962,1.7794353494215,2.65009822152472,1.45462575940567,0,0.585561594023094,1.04723353406728,0.255457055208591,5.27186547826049,3.59941638596045,3.81210681219194,0.599162557619291,0,0.376963056338593,0.521472960576829,0.767146371990992,0.20778804455956,0.162241263067758,0.916554274652847,1.49288364732112,1.0108910337347,0.631325567659422,2.60240885925407,2.06911893990126,1.62055916824814,1.20563854268572,1.08858398642125,0.512454881139399,0.655912071918102,0.517406741478031,4.31135985865684,1.70195472151037,1.58356011747554,1.09597866213787,1.94633074457919,0.696504333044333,0.823128545631774,2.9855140022774,9.12877143507205,5.1469581422943,2.84163499395593,3.72826390563903,2.57978665979206,3.24111710629827,2.60419209143731,3.54175617145327,3.08534225774756,2.32533944750408,3.48755421819505,2.33530684734339,3.45575684818309,3.11918181750281,1.62137619091711,2.04679982395465,1.97595103761946,1.61047702512446,0.841159794256509,0.720332286654991,0.660837565967596,1.32225283331772,1.91959425481711,2.55460339046482,1.80414445850931,1.21010114774006,1.33426826306922,1.71203063501303,1.42358718463353,0.988193728344065,0.502670417600539,0.596869416123452,1.36474860983384,0.898819408654221,0.864552199498777,1.1948476395262,2.65535061334314,3.08470984046268,1.1270773567308,2.64746726198909,3.49114476901726,1.75339549725796,2.27651533647326,2.21415221969403,3.61097074035162,4.07210640941942,6.22550516883013,4.67166296005063,5.11053387294328,5.62155280962134,5.07150303471257,3.61765739628625,3.8193877767213,1.43848068725405,3.08056930872567,3.0201755450689,1.43768206527355,1.11642284300551,3.12037673114561,2.52578877947112,2.15276896226295,5.78932225636041,1.66277871149944,3.97931964718018,4.88894929326078,1.52770577197669,1.87752198630802,1.34005005953453,1.6663054862021,1.56106918286239,1.41871629695572,0.8858587585951,0.797273843287435,0.655453258862952,1.20879487306127,0.867894351489069,0,0,1.96705709207614,2.48343071674259,0,0.468846746368813,1.3114795630134,1.00988370881749,0.94652465824877,1.56175497718655,2.36965737506079,2.86762557543062,0.668396022247182,1.13230612315533,2.02405350837447,1.46127928955656,1.97643888973262,0.321321316421807,1.56134093729095,0.890328018336276,0.651547837414304,0.989820737835213,3.98235415019888,3.64170954232472,3.32555912661226,2.07465587731488,2.6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| ||
|EntrezGene=231327 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000031158_5end | |||
|description=CAGE_peak_3_at_Ppat_5end | |||
|id=chr5:77380185..77380199,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001041!1.87e-11!92;UBERON:0001048!3.52e-11!147;UBERON:0000926!9.94e-11!193;UBERON:0004120!9.94e-11!193;UBERON:0006603!9.94e-11!193;UBERON:0000077!1.34e-09!97;UBERON:0005057!8.86e-09!51;UBERON:0003104!3.87e-08!131;UBERON:0009142!3.87e-08!131;UBERON:0000466!1.16e-07!79;UBERON:0000949!3.23e-07!72;UBERON:0005172!5.88e-07!49;UBERON:0005173!5.88e-07!49;UBERON:0002417!5.88e-07!49;UBERON:0000916!5.88e-07!49;UBERON:0005177!7.41e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.40e-09,79;UBERON:0001041,4.52e-08,80;UBERON:0001048,7.15e-08,134;UBERON:0000949,9.04e-08,72;UBERON:0005172,5.16e-07,49;UBERON:0005173,5.16e-07,49;UBERON:0002417,5.16e-07,49;UBERON:0000916,5.16e-07,49 | |||
|phase1_expression=2.24208385946712,0,0,0,0.500895729946347,1.17515490338323,1.40167584357315,1.42035655785734,11.9670413828917,7.95819389494778,3.93801326918661,4.3874687447435,1.71200729931206,1.13646523144697,5.66286595086627,5.26435695213547,6.29605690315332,0.946386496074713,1.09691546884591,0.84877930359606,1.19060606211498,3.97163804803541,4.96279599363977,0.47997726838022,0.68822784320151,0,0,0.430942465371778,0.570070258369122,0.252030129759931,1.77384408524244,4.44521471421742,3.69038872550742,0,1.1554064790051,3.32469290716985,2.85837098767317,0.418531630736908,0.7813353445238,1.0470474879476,0,0,0,0.503587271902309,0.405507724878058,0.183546752161682,0,0.218025156380447,0,0.58328969722285,0.699932108126813,0,1.67782606057736,1.45072428402269,2.01656279485478,1.02903774414379,0.286533439938757,1.03134418455488,1.01158230429799,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,0.675029691658453,0,0.285650984403804,0.662605622854841,1.22490799214954,1.0543001812006,0,0,0.255374676170375,0.614426133024974,0.791317726381163,0.365950574409639,1.04182674111352,0.837548997004143,0,0.763991238884051,0.589257170947335,0.854230084794618,0.931997229126503,1.8931548333296,1.43585964202892,1.15945795480671,0,2.03991400112325,3.2382191498269,3.89865850468601,4.03224198387602,1.82577746171277,1.53387290320252,0.519572009205738,0.70667914902068,1.40843419776681,1.28326477414318,0,0,1.73192832808971,0.253359865475099,3.0331466700887,1.82694207550496,0.776813650941515,0.890652834388949,1.21439728736295,0.304465478312141,1.38369298353635,1.20578112442098,1.52865319276416,0.628332956648377,1.97755974187499,0.722996784599558,2.65383165584962,1.7794353494215,2.65009822152472,1.45462575940567,0,0.585561594023094,1.04723353406728,0.255457055208591,5.27186547826049,3.59941638596045,3.81210681219194,0.599162557619291,0,0.376963056338593,0.521472960576829,0.767146371990992,0.20778804455956,0.162241263067758,0.916554274652847,1.49288364732112,1.0108910337347,0.631325567659422,2.60240885925407,2.06911893990126,1.62055916824814,1.20563854268572,1.08858398642125,0.512454881139399,0.655912071918102,0.517406741478031,4.31135985865684,1.70195472151037,1.58356011747554,1.09597866213787,1.94633074457919,0.696504333044333,0.823128545631774,2.9855140022774,9.12877143507205,5.1469581422943,2.84163499395593,3.72826390563903,2.57978665979206,3.24111710629827,2.60419209143731,3.54175617145327,3.08534225774756,2.32533944750408,3.48755421819505,2.33530684734339,3.45575684818309,3.11918181750281,1.62137619091711,2.04679982395465,1.97595103761946,1.61047702512446,0.841159794256509,0.720332286654991,0.660837565967596,1.32225283331772,1.91959425481711,2.55460339046482,1.80414445850931,1.21010114774006,1.33426826306922,1.71203063501303,1.42358718463353,0.988193728344065,0.502670417600539,0.596869416123452,1.36474860983384,0.898819408654221,0.864552199498777,1.1948476395262,2.65535061334314,3.08470984046268,1.1270773567308,2.64746726198909,3.49114476901726,1.75339549725796,2.27651533647326,2.21415221969403,3.61097074035162,4.07210640941942,6.22550516883013,4.67166296005063,5.11053387294328,5.62155280962134,5.07150303471257,3.61765739628625,3.8193877767213,1.43848068725405,3.08056930872567,3.0201755450689,1.43768206527355,1.11642284300551,3.12037673114561,2.52578877947112,2.15276896226295,5.78932225636041,1.66277871149944,3.97931964718018,4.88894929326078,1.52770577197669,1.87752198630802,1.34005005953453,1.6663054862021,1.56106918286239,1.41871629695572,0.8858587585951,0.797273843287435,0.655453258862952,1.20879487306127,0.867894351489069,0,0,1.96705709207614,2.48343071674259,0,0.468846746368813,1.3114795630134,1.00988370881749,0.94652465824877,1.56175497718655,2.36965737506079,2.86762557543062,0.668396022247182,1.13230612315533,2.02405350837447,1.46127928955656,1.97643888973262,0.321321316421807,1.56134093729095,0.890328018336276,0.651547837414304,0.989820737835213,3.98235415019888,3.64170954232472,3.32555912661226,2.07465587731488,2.65771703592696,2.15204603560749,3.35956781118687,2.90826983582004,2.85197902707777,1.8962205476149,4.21674434299995,4.12542172992747,0,1.44048875225048,1.03486947026204,1.50035924522115,1.59606210278046,1.24858172321449,1.81003922662333,0.608929898229199,1.64270195644597,0.63549621259146,0.441056796109924,0.98931751764888,0.807322133479528,0.784068024066026,0.954978752025092,0.492422699235184,0.874442509889552,0.370850604021019,2.39219233116994,1.65109494370578,4.62986318424279,4.33247451110789,3.69074414846768,5.0331198105435,2.88963330989554,1.53946597556024,2.3493995546752,1.90934123603023,2.53068794864908,3.45643094115643,1.72808545314882,1.67270636811575,1.9652630737156,1.34864346384821,1.90102948168273,2.35580347785627,0.388844919875379,0.621339313086926,1.12738587736838,2.39226473670366,1.48912641411388,1.16670713006429,1.16243841129958,1.85851738039856,1.99507305697782,2.73429208172295,1.8874681996628,1.20792060413003,2.59227005632079,1.58005560314089,1.82452693761148,2.67048488628551,3.767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| |||
|short_description=p3@Ppat | |||
}} |
Revision as of 08:03, 14 September 2013
Short description: | p3@Ppat |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ppat_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000031158_5end |
EntrezGene: | Ppat |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 7.40e-09 | 79 |
foregut | 4.52e-08 | 80 |
primordium | 7.15e-08 | 134 |
endocrine system | 9.04e-08 | 72 |
abdomen element | 5.16e-07 | 49 |
abdominal segment element | 5.16e-07 | 49 |
abdominal segment of trunk | 5.16e-07 | 49 |
abdomen | 5.16e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.