Personal tools

FFCP PHASE1:Mm9::chr5:89194174..89194185,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=13178|HGNC=|MCL_coexpression_id=527|UniProt=P43346,Q545E8|association_with_transcript=136bp_to_NM_007832,uc008yah.1_5end|description=CAGE_peak_3_at_Dck_5end|id=chr5:89194174..89194185,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!7.20e-08!70;UBERON:0005057!3.10e-07!51;UBERON:0002193!3.76e-07!48;UBERON:0002390!3.95e-07!45;UBERON:0003061!3.95e-07!45;UBERON:0004177!4.61e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.56e-08,45;UBERON:0003061,2.56e-08,45;UBERON:0002193,3.43e-08,48;UBERON:0002405,3.43e-08,48;UBERON:0004177,4.31e-08,29;UBERON:0005057,4.31e-08,29|phase1_expression=0.960893082628764,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,1.84667199103079,0.700837921786577,2.45334314538995,0.703943610758334,0.70219357896598,0,0.239316476986009,2.9104124088305,2.71003247498892,6.66219523631325,12.3509913107794,19.5877325875881,3.3123527362615,4.52477630898938,3.39511721438424,0.935476191661768,4.0709289992363,3.13439746966722,0.799962113967033,1.60586496747019,0,2.15380998079537,1.50829862880122,1.14014051673824,0.756090389279792,0.886922042621219,1.90509202037889,0.61506478758457,0,2.3108129580102,2.32728503501889,0.816677425049476,5.4409111995798,4.6880120671428,3.66466620781659,8.82347232046521,7.5135003345429,1.94204141212461,0.503587271902309,0.202753862439029,0,0.782391344348039,1.74420125104357,1.09843091367236,0.194429899074283,0.55994568650145,1.43752564364972,3.02008690903925,3.62681071005672,2.68875039313971,0.514518872071894,0.286533439938757,1.03134418455488,2.02316460859598,3.1739458756322,0,3.38844532069132,0,3.1496490104849,0,0.7104801149461,0.898800331555214,0,3.42175720617976,3.78016627328734,2.10324961351382,1.14260393761521,0.220868540951614,2.08234358665422,1.82106394934649,0.919218786610021,0,0.766124028511126,0.307213066512487,0.791317726381163,1.82975287204819,3.12548022334056,0.279182999001381,0,0.45839474333043,0.883885756421003,0.996601765593721,1.86399445825301,0.908714319998209,1.36028808192214,0.869593466105033,0.860423876981386,1.3599426674155,0,0,0.448026887097336,0.702222100658759,1.02258193546835,0.779358013808606,1.41335829804136,0.845060518660083,2.56652954828636,0,0,1.94841936910093,1.77351905832569,1.51657333504435,0.68510327831436,4.91981978929626,0,2.77576522825817,0.608930956624282,0.922461989024234,1.3565037649736,0.470354828542819,1.0053327306374,0.741584903203122,0.144599356919912,10.6153266233985,1.94120219936891,7.28777010919299,2.90925151881133,3.72783522436244,0.292780797011547,1.46612694769419,0.766371165625774,1.7972268675888,0.599902730993408,2.79554499560742,0.449371918214468,0,0.628271760564322,0.695297280769106,1.27857728665165,0.20778804455956,0.486723789203273,2.13862664085664,4.72746488318353,0,0.841767423545896,1.95180664444056,1.83921683546778,2.52086981727489,3.0140963567143,2.04109497453984,2.0498195245576,2.15513966487376,0.776110112217047,4.74249584452253,3.02569728268511,1.58356011747554,1.53437012699302,0.556094498451196,3.1342694986995,1.02891068203972,0.995171334092466,0.702213187313235,0,1.42081749697796,2.69263504296152,1.40715635988658,1.98068267607116,1.89395788468168,2.16440654922144,1.54267112887378,0.697601834251224,1.60964040839772,0.583826711835847,1.15191894939436,0.820837320395476,0.729619285912702,0.292399974850665,0,0.805238512562231,0,1.54356918568927,0.991256348951394,0.264450566663544,2.13288250535234,2.32236671860439,3.8660238396628,1.61346819698674,0.667134131534611,1.14135375667535,0,0.823494773620054,0.251335208800269,1.1937388322469,0.779856348476481,0.898819408654221,1.51296634912286,0.199141273254367,2.27601481143698,2.39921876480431,2.25415471346161,1.01825663922657,1.35766741017338,0.98190147846446,1.51767689098217,0.442830443938806,0.470996183524124,0.246794327843601,1.77871576252289,4.83850806576673,5.50365186316968,6.74586337154561,6.49152388443209,6.99413763282009,5.0925170356284,3.74004978686054,3.56697498905078,5.49122826376163,2.87536413054709,1.11642284300551,1.87222603868736,1.76805214562978,1.25578189465339,0,1.10851914099963,2.08440552947533,3.7481944581666,2.8856664581782,2.34690248288502,2.84760637651087,1.19021820443007,0.195133647857799,1.41871629695572,1.55025282754142,0.956728611944923,0.163863314715738,1.20879487306127,0.578596234326046,3.01582567878545,7.61467957346193,0.983528546038072,1.10374698521893,0.160550589987792,0.586058432961016,1.14754461763673,1.26235463602186,3.78609863299508,2.34263246577983,2.36965737506079,0.955875191810208,1.78238939265915,1.98153571552183,3.23848561339915,0.876767573733936,3.95287777946523,0.321321316421807,0.567760340833074,1.78065603667255,1.62886959353576,0.659880491890142,0,1.69946445308487,1.81394134178851,0.565815239267694,1.18120757152309,0.614870295887855,1.03371317267288,1.45413491791002,1.78248689192361,0.632073515871632,1.05418608574999,0,0.680879211507576,2.34079422240703,2.8458910432206,2.7863814554107,0.886701168211368,1.24858172321449,0.987294123612726,1.2178597964584,1.40803024838226,0.847328283455281,0.661585194164886,0.49465875882444,2.09903754704677,1.99032652262914,1.55184047204077,1.31312719796049,0.874442509889552,0.370850604021019,6.1513517087227,2.68302928352189,5.37064129372164,10.1718966782533,8.88512480186664,8.46479240864134,2.03974115992626,1.6794174278839,1.79659965945751,1.90934123603023,2.21435195506795,1.82987520414164,1.62008011232702,2.09088296014469,1.74690050996942,1.75323650300267,1.07449492442937,0.785267825952089,0.777689839750757,0,0,1.94371509857172,2.15096037594227,2.52786544847262,2.0665571756437,1.18269287843545,1.05621514781179,1.17183946359555,1.57289016638566,0.483168241652012,0.864090018773596,8.53230025696081,3.04087822935246,2.67048488628551,4.02754551231165,7.51912121803422,4.76835251475036,7.69250876927801,6.94140777720513,8.38021534569625,8.30654192539498,9.57848758799985,8.86866714731747,10.9681499469976,13.0902130443357,0,1.77588762699252,4.30626511725483,2.01461539636894,0.772758376128762,2.81523713176773,0.915758121336325,0.857473516316263,0,1.12950368523413,1.38097570952153,2.29158205375759,0.859265911718438,0.685082519770642,0,2.70009000092722,0.45032120322422,2.26571204492102,0,3.1136204275253,4.38927360741134,3.07320490357441,1.45864030240976,1.46729213839588,1.65459157605013,1.33348036680969,0.618105171716683,0.962757628775446,0.252697211763798,2.02783439912192,1.69763707247469,1.49826411951812,1.34452820050225,1.60819313075717,2.85776214769844,1.50649623728312,0.964546102318525,1.64834360321323,2.20798380201596,0.685738504770831,1.06485483695602,1.1921809497366,1.45346416632329,1.12931256498397,0.930760686808441,1.64635175585495,1.8414879800649,0.950628796921032,1.12228454331548,1.42362021749009,1.57607171800902,1.63692417267876,1.54936841185966,2.3148793317737,1.74867404556562,0.467863216890817,1.28922632428979,0.191288332068843,2.20591419119516,1.85494268496337|short_description=p3@Dck}}
|EntrezGene=13178
|HGNC=
|MCL_coexpression_id=527
|UniProt=P43346,Q545E8
|association_with_transcript=136bp_to_NM_007832,uc008yah.1_5end
|description=CAGE_peak_3_at_Dck_5end
|id=chr5:89194174..89194185,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!7.20e-08!70;UBERON:0005057!3.10e-07!51;UBERON:0002193!3.76e-07!48;UBERON:0002390!3.95e-07!45;UBERON:0003061!3.95e-07!45;UBERON:0004177!4.61e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.56e-08,45;UBERON:0003061,2.56e-08,45;UBERON:0002193,3.43e-08,48;UBERON:0002405,3.43e-08,48;UBERON:0004177,4.31e-08,29;UBERON:0005057,4.31e-08,29
|phase1_expression=0.960893082628764,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,1.84667199103079,0.700837921786577,2.45334314538995,0.703943610758334,0.70219357896598,0,0.239316476986009,2.9104124088305,2.71003247498892,6.66219523631325,12.3509913107794,19.5877325875881,3.3123527362615,4.52477630898938,3.39511721438424,0.935476191661768,4.0709289992363,3.13439746966722,0.799962113967033,1.60586496747019,0,2.15380998079537,1.50829862880122,1.14014051673824,0.756090389279792,0.886922042621219,1.90509202037889,0.61506478758457,0,2.3108129580102,2.32728503501889,0.816677425049476,5.4409111995798,4.6880120671428,3.66466620781659,8.82347232046521,7.5135003345429,1.94204141212461,0.503587271902309,0.202753862439029,0,0.782391344348039,1.74420125104357,1.09843091367236,0.194429899074283,0.55994568650145,1.43752564364972,3.02008690903925,3.62681071005672,2.68875039313971,0.514518872071894,0.286533439938757,1.03134418455488,2.02316460859598,3.1739458756322,0,3.38844532069132,0,3.1496490104849,0,0.7104801149461,0.898800331555214,0,3.42175720617976,3.78016627328734,2.10324961351382,1.14260393761521,0.220868540951614,2.08234358665422,1.82106394934649,0.919218786610021,0,0.766124028511126,0.307213066512487,0.791317726381163,1.82975287204819,3.12548022334056,0.279182999001381,0,0.45839474333043,0.883885756421003,0.996601765593721,1.86399445825301,0.908714319998209,1.36028808192214,0.869593466105033,0.860423876981386,1.3599426674155,0,0,0.448026887097336,0.702222100658759,1.02258193546835,0.779358013808606,1.41335829804136,0.845060518660083,2.56652954828636,0,0,1.94841936910093,1.77351905832569,1.51657333504435,0.68510327831436,4.91981978929626,0,2.77576522825817,0.608930956624282,0.922461989024234,1.3565037649736,0.470354828542819,1.0053327306374,0.741584903203122,0.144599356919912,10.6153266233985,1.94120219936891,7.28777010919299,2.90925151881133,3.72783522436244,0.292780797011547,1.46612694769419,0.766371165625774,1.7972268675888,0.599902730993408,2.79554499560742,0.449371918214468,0,0.628271760564322,0.695297280769106,1.27857728665165,0.20778804455956,0.486723789203273,2.13862664085664,4.72746488318353,0,0.841767423545896,1.95180664444056,1.83921683546778,2.52086981727489,3.0140963567143,2.04109497453984,2.0498195245576,2.15513966487376,0.776110112217047,4.74249584452253,3.02569728268511,1.58356011747554,1.53437012699302,0.556094498451196,3.1342694986995,1.02891068203972,0.995171334092466,0.702213187313235,0,1.42081749697796,2.69263504296152,1.40715635988658,1.98068267607116,1.89395788468168,2.16440654922144,1.54267112887378,0.697601834251224,1.60964040839772,0.583826711835847,1.15191894939436,0.820837320395476,0.729619285912702,0.292399974850665,0,0.805238512562231,0,1.54356918568927,0.991256348951394,0.264450566663544,2.13288250535234,2.32236671860439,3.8660238396628,1.61346819698674,0.667134131534611,1.14135375667535,0,0.823494773620054,0.251335208800269,1.1937388322469,0.779856348476481,0.898819408654221,1.51296634912286,0.199141273254367,2.27601481143698,2.39921876480431,2.25415471346161,1.01825663922657,1.35766741017338,0.98190147846446,1.51767689098217,0.442830443938806,0.470996183524124,0.246794327843601,1.77871576252289,4.83850806576673,5.50365186316968,6.74586337154561,6.49152388443209,6.99413763282009,5.0925170356284,3.74004978686054,3.56697498905078,5.49122826376163,2.87536413054709,1.11642284300551,1.87222603868736,1.76805214562978,1.25578189465339,0,1.10851914099963,2.08440552947533,3.7481944581666,2.8856664581782,2.34690248288502,2.84760637651087,1.19021820443007,0.195133647857799,1.41871629695572,1.55025282754142,0.956728611944923,0.163863314715738,1.20879487306127,0.578596234326046,3.01582567878545,7.61467957346193,0.983528546038072,1.10374698521893,0.160550589987792,0.586058432961016,1.14754461763673,1.26235463602186,3.78609863299508,2.34263246577983,2.36965737506079,0.955875191810208,1.78238939265915,1.98153571552183,3.23848561339915,0.876767573733936,3.95287777946523,0.321321316421807,0.567760340833074,1.78065603667255,1.62886959353576,0.659880491890142,0,1.69946445308487,1.81394134178851,0.565815239267694,1.18120757152309,0.614870295887855,1.03371317267288,1.45413491791002,1.78248689192361,0.632073515871632,1.05418608574999,0,0.680879211507576,2.34079422240703,2.8458910432206,2.7863814554107,0.886701168211368,1.24858172321449,0.987294123612726,1.2178597964584,1.40803024838226,0.847328283455281,0.661585194164886,0.49465875882444,2.09903754704677,1.99032652262914,1.55184047204077,1.31312719796049,0.874442509889552,0.370850604021019,6.1513517087227,2.68302928352189,5.37064129372164,10.1718966782533,8.88512480186664,8.46479240864134,2.03974115992626,1.6794174278839,1.79659965945751,1.90934123603023,2.21435195506795,1.82987520414164,1.62008011232702,2.09088296014469,1.74690050996942,1.75323650300267,1.07449492442937,0.785267825952089,0.777689839750757,0,0,1.94371509857172,2.15096037594227,2.52786544847262,2.0665571756437,1.18269287843545,1.05621514781179,1.17183946359555,1.57289016638566,0.483168241652012,0.864090018773596,8.53230025696081,3.04087822935246,2.67048488628551,4.02754551231165,7.51912121803422,4.76835251475036,7.69250876927801,6.94140777720513,8.38021534569625,8.30654192539498,9.57848758799985,8.86866714731747,10.9681499469976,13.0902130443357,0,1.77588762699252,4.30626511725483,2.01461539636894,0.772758376128762,2.81523713176773,0.915758121336325,0.857473516316263,0,1.12950368523413,1.38097570952153,2.29158205375759,0.859265911718438,0.685082519770642,0,2.70009000092722,0.45032120322422,2.26571204492102,0,3.1136204275253,4.38927360741134,3.07320490357441,1.45864030240976,1.46729213839588,1.65459157605013,1.33348036680969,0.618105171716683,0.962757628775446,0.252697211763798,2.02783439912192,1.69763707247469,1.49826411951812,1.34452820050225,1.60819313075717,2.85776214769844,1.50649623728312,0.964546102318525,1.64834360321323,2.20798380201596,0.685738504770831,1.06485483695602,1.1921809497366,1.45346416632329,1.12931256498397,0.930760686808441,1.64635175585495,1.8414879800649,0.950628796921032,1.12228454331548,1.42362021749009,1.57607171800902,1.63692417267876,1.54936841185966,2.3148793317737,1.74867404556562,0.467863216890817,1.28922632428979,0.191288332068843,2.20591419119516,1.85494268496337
|short_description=p3@Dck
}}

Revision as of 08:13, 14 September 2013

Short description:p3@Dck
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Dck_5end
Coexpression cluster:MCL_coexpression_mm9:527
Association with transcript: 136bp_to_NM_007832, uc008yah.1_5end
EntrezGene:Dck
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Dck

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.71
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A312.35
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A519.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H94.92
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A67.29
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.80
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.73
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D83.87
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H65.50
liver, embryo E14.CNhs10594.409-16E16.75
liver, embryo E15.CNhs10520.433-16D76.49
liver, embryo E16.CNhs10523.462-17F56.99
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G25.49
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H31.99
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G26.15
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F25.37
spleen, neonate N10.CNhs11116.752-24D110.17
spleen, neonate N20.CNhs11112.824-19H18.89
spleen, neonate N25.CNhs11099.1354-25G38.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B58.53
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C17.52
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F87.69
thymus, neonate N03.CNhs11137.2104-43C76.94
thymus, neonate N06.CNhs11197.681-26C48.38
thymus, neonate N07.CNhs11211.713-19D38.31
thymus, neonate N10.CNhs11194.748-24E49.58
thymus, neonate N20.CNhs11186.820-7A28.87
thymus, neonate N25.CNhs11125.1362-25G710.97
thymus, neonate N30.CNhs11132.1393-42G213.09
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.31
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hematopoietic system2.56e-0845
blood island2.56e-0845
hemolymphoid system3.43e-0848
immune system3.43e-0848
hemopoietic organ4.31e-0829
immune organ4.31e-0829







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:89194174..89194185,%2B&oldid=3025991"